RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 POTEIP0CG38 1075 aa9.28□□□□□ -0.92
SYPL1-203ENST00000460770 LHX8Q68G74 356 aa9.28□□□□□ -0.92
SYPL1-203ENST00000460770 RASEFQ8IZ41 740 aa9.27□□□□□ -0.93
SYPL1-203ENST00000460770 MS4A3Q96HJ5 214 aa9.25□□□□□ -0.93
SYPL1-203ENST00000460770 VASPP50552 380 aaPredicted RBP9.24□□□□□ -0.93
SYPL1-203ENST00000460770 KIF12Q96FN5 646 aa9.24□□□□□ -0.93
SYPL1-203ENST00000460770 KLHL34Q8N239 644 aa9.23□□□□□ -0.93
SYPL1-203ENST00000460770 NUBP1P53384 320 aa9.22□□□□□ -0.93
SYPL1-203ENST00000460770 SGIP1Q9BQI5 828 aa9.21□□□□□ -0.94
SYPL1-203ENST00000460770 ASTLQ6HA08 431 aaPredicted RBP9.19□□□□□ -0.94
SYPL1-203ENST00000460770 MAP3K13O43283 966 aa9.18□□□□□ -0.94
SYPL1-203ENST00000460770 DCAF8Q5TAQ9 597 aa9.17□□□□□ -0.94
SYPL1-203ENST00000460770 SLC39A7Q92504 469 aa9.17□□□□□ -0.94
SYPL1-203ENST00000460770 ATMINO43313 823 aaPredicted RBP9.16□□□□□ -0.94
SYPL1-203ENST00000460770 C7P10643 843 aa9.16□□□□□ -0.94
SYPL1-203ENST00000460770 PCDHB13Q9Y5F0 798 aa9.16□□□□□ -0.94
SYPL1-203ENST00000460770 TIE1P35590 1138 aa9.15□□□□□ -0.94
SYPL1-203ENST00000460770 GSE1Q14687 1217 aa9.15□□□□□ -0.94
SYPL1-203ENST00000460770 METRNQ9UJH8 293 aa9.12□□□□□ -0.95
SYPL1-203ENST00000460770 PELP1Q8IZL8 1130 aaKnown RBP9.09□□□□□ -0.95
SYPL1-203ENST00000460770 BMP2KQ9NSY1 1161 aaPredicted RBP9.09□□□□□ -0.95
SYPL1-203ENST00000460770 ATN1P54259 1190 aaPredicted RBP9.08□□□□□ -0.96
SYPL1-203ENST00000460770 SPOCK2Q92563 424 aa9.08□□□□□ -0.96
SYPL1-203ENST00000460770 MAMSTRQ6ZN01 415 aa9.07□□□□□ -0.96
SYPL1-203ENST00000460770 PLSCR2Q9NRY7 297 aa9.07□□□□□ -0.96
SYPL1-203ENST00000460770 TTLL13PA6NNM8 815 aa9.05□□□□□ -0.96
SYPL1-203ENST00000460770 PYGBP11216 843 aa9.05□□□□□ -0.96
SYPL1-203ENST00000460770 IFNL1Q8IU54 200 aa9.05□□□□□ -0.96
SYPL1-203ENST00000460770 SEC24BO95487 1268 aa9.04□□□□□ -0.96
SYPL1-203ENST00000460770 IER5LQ5T953 404 aa9.04□□□□□ -0.96
SYPL1-203ENST00000460770 ZNF467Q7Z7K2 595 aaPredicted RBP9.03□□□□□ -0.96
SYPL1-203ENST00000460770 TMEM106CQ9BVX2 250 aa9.03□□□□□ -0.96
SYPL1-203ENST00000460770 TRPC6Q9Y210 931 aa9.03□□□□□ -0.96
SYPL1-203ENST00000460770 CHRM1P11229 460 aaPredicted RBP9.01□□□□□ -0.97
SYPL1-203ENST00000460770 IFNLR1Q8IU57 520 aaPredicted RBP9.01□□□□□ -0.97
SYPL1-203ENST00000460770 TRIM35Q9UPQ4 493 aa9.01□□□□□ -0.97
SYPL1-203ENST00000460770 SCUBE2Q9NQ36 999 aa9□□□□□ -0.97
SYPL1-203ENST00000460770 CIZ1Q9ULV3 898 aaPredicted RBP8.99□□□□□ -0.97
SYPL1-203ENST00000460770 TRIM41Q8WV44 630 aa8.98□□□□□ -0.97
SYPL1-203ENST00000460770 OTUD5Q96G74 571 aa8.97□□□□□ -0.97
SYPL1-203ENST00000460770 POTEB2H3BUK9 544 aa8.96□□□□□ -0.98
SYPL1-203ENST00000460770 GOLGA2Q08379 1002 aa8.95□□□□□ -0.98
SYPL1-203ENST00000460770 PCDHB8Q9UN66 801 aa8.95□□□□□ -0.98
SYPL1-203ENST00000460770 PLCG2P16885 1265 aa8.94□□□□□ -0.98
SYPL1-203ENST00000460770 MKRN3Q13064 507 aaKnown RBP8.89□□□□□ -0.99
SYPL1-203ENST00000460770 PDAP1Q13442 181 aaKnown RBP8.89□□□□□ -0.99
SYPL1-203ENST00000460770 COLQQ9Y215 455 aaPredicted RBP8.89□□□□□ -0.99
SYPL1-203ENST00000460770 PSEN1P49768 467 aa8.88□□□□□ -0.99
SYPL1-203ENST00000460770 OCEL1Q9H607 264 aa8.88□□□□□ -0.99
SYPL1-203ENST00000460770 POTEFA5A3E0 1075 aa8.87□□□□□ -0.99
SYPL1-203ENST00000460770 POTEJP0CG39 1038 aa8.85□□□□□ -0.99
SYPL1-203ENST00000460770 IRX5P78411 483 aaPredicted RBP8.85□□□□□ -0.99
SYPL1-203ENST00000460770 TAOK2Q9UL54 1235 aa8.8□□□□□ -1
SYPL1-203ENST00000460770 L3MBTL3Q96JM7 780 aaPredicted RBP8.79□□□□□ -1
SYPL1-203ENST00000460770 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.79□□□□□ -1
SYPL1-203ENST00000460770 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.78□□□□□ -1
SYPL1-203ENST00000460770 RIOK3O14730 519 aaKnown RBP8.77□□□□□ -1.01
SYPL1-203ENST00000460770 SLAIN1Q8ND83 568 aa8.77□□□□□ -1.01
SYPL1-203ENST00000460770 G3V3G9 751 aa8.76□□□□□ -1.01
SYPL1-203ENST00000460770 CABP2Q9NPB3 220 aa8.76□□□□□ -1.01
SYPL1-203ENST00000460770 C3orf67Q6ZVT6 689 aa8.75□□□□□ -1.01
SYPL1-203ENST00000460770 FAM163AQ96GL9 167 aaPredicted RBP8.74□□□□□ -1.01
SYPL1-203ENST00000460770 SNPHO15079 494 aa8.73□□□□□ -1.01
SYPL1-203ENST00000460770 VGFO15240 615 aaPredicted RBP8.73□□□□□ -1.01
SYPL1-203ENST00000460770 PDCD7Q8N8D1 485 aaKnown RBP8.73□□□□□ -1.01
SYPL1-203ENST00000460770 POTEMA6NI47 508 aa8.71□□□□□ -1.02
SYPL1-203ENST00000460770 POTEGQ6S5H5 508 aa8.71□□□□□ -1.02
SYPL1-203ENST00000460770 PCDH10Q9P2E7 1040 aa8.71□□□□□ -1.02
SYPL1-203ENST00000460770 ILDR1Q86SU0 546 aaPredicted RBP8.68□□□□□ -1.02
SYPL1-203ENST00000460770 SOX12O15370 315 aa8.66□□□□□ -1.02
SYPL1-203ENST00000460770 ECM2O94769 699 aaPredicted RBP8.66□□□□□ -1.02
SYPL1-203ENST00000460770 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.65□□□□□ -1.02
SYPL1-203ENST00000460770 ZFP91Q96JP5 570 aaPredicted RBP8.65□□□□□ -1.02
SYPL1-203ENST00000460770 BOLA1Q9Y3E2 137 aa8.65□□□□□ -1.02
SYPL1-203ENST00000460770 EFCAB3Q8N7B9 438 aa8.64□□□□□ -1.03
SYPL1-203ENST00000460770 RNF25Q96BH1 459 aaPredicted RBP8.64□□□□□ -1.03
SYPL1-203ENST00000460770 TMEM121BQ9BXQ6 578 aaPredicted RBP8.62□□□□□ -1.03
SYPL1-203ENST00000460770 DPY19L2Q6NUT2 758 aa8.59□□□□□ -1.03
SYPL1-203ENST00000460770 ST18O60284 1047 aa8.58□□□□□ -1.04
SYPL1-203ENST00000460770 NLRP6P59044 892 aa8.58□□□□□ -1.04
SYPL1-203ENST00000460770 LCE2DQ5TA82 110 aaPredicted RBP8.58□□□□□ -1.04
SYPL1-203ENST00000460770 BCL11BQ9C0K0 894 aaPredicted RBP8.58□□□□□ -1.04
SYPL1-203ENST00000460770 STK24Q9Y6E0 443 aa8.58□□□□□ -1.04
SYPL1-203ENST00000460770 STK25O00506 426 aa8.57□□□□□ -1.04
SYPL1-203ENST00000460770 PKD2Q13563 968 aa8.55□□□□□ -1.04
SYPL1-203ENST00000460770 PHF8Q9UPP1 1060 aa8.53□□□□□ -1.04
SYPL1-203ENST00000460770 MICALL2Q8IY33 904 aa8.52□□□□□ -1.05
SYPL1-203ENST00000460770 RIMBP2O15034 1052 aa8.51□□□□□ -1.05
SYPL1-203ENST00000460770 RGL2O15211 777 aa8.5□□□□□ -1.05
SYPL1-203ENST00000460770 DOK7Q18PE1 504 aa8.5□□□□□ -1.05
SYPL1-203ENST00000460770 ZNF710Q8N1W2 664 aa8.5□□□□□ -1.05
SYPL1-203ENST00000460770 CDAN1Q8IWY9 1227 aa8.49□□□□□ -1.05
SYPL1-203ENST00000460770 EMP3P54852 163 aa8.48□□□□□ -1.05
SYPL1-203ENST00000460770 MS4A4AQ96JQ5 239 aa8.48□□□□□ -1.05
SYPL1-203ENST00000460770 FBXO22Q8NEZ5 403 aa8.46□□□□□ -1.06
SYPL1-203ENST00000460770 MARVELD3Q96A59 401 aa8.45□□□□□ -1.06
SYPL1-203ENST00000460770 MFRPQ9BY79 579 aa8.44□□□□□ -1.06
SYPL1-203ENST00000460770 ZSWIM6Q9HCJ5 1215 aa8.43□□□□□ -1.06
SYPL1-203ENST00000460770 HOXB3P14651 431 aaPredicted RBP8.41□□□□□ -1.06
SYPL1-203ENST00000460770 HS6ST3Q8IZP7 471 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms