RNA–Protein interactions for RNA: ENST00000460741.1

HOMER1-203, Transcript of homer scaffold protein 1, humanhuman

TSL 2

Gene HOMER1, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER1-203ENST00000460741 FBXO3Q9UK99 471 aa13.55□□□□□ -0.24
HOMER1-203ENST00000460741 HAP1P54257 671 aaPredicted RBP13.51□□□□□ -0.25
HOMER1-203ENST00000460741 POTEGQ6S5H5 508 aa13.5□□□□□ -0.25
HOMER1-203ENST00000460741 PELP1Q8IZL8 1130 aaKnown RBP13.48□□□□□ -0.25
HOMER1-203ENST00000460741 NPM1P06748 294 aaKnown RBP eCLIP13.47□□□□□ -0.25
HOMER1-203ENST00000460741 DCAF8L2P0C7V8 631 aa13.46□□□□□ -0.25
HOMER1-203ENST00000460741 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
HOMER1-203ENST00000460741 VASPP50552 380 aaPredicted RBP13.42□□□□□ -0.26
HOMER1-203ENST00000460741 ASTLQ6HA08 431 aaPredicted RBP13.41□□□□□ -0.26
HOMER1-203ENST00000460741 METRNQ9UJH8 293 aa13.41□□□□□ -0.26
HOMER1-203ENST00000460741 PCDH10Q9P2E7 1040 aa13.4□□□□□ -0.26
HOMER1-203ENST00000460741 SLC39A7Q92504 469 aa13.38□□□□□ -0.27
HOMER1-203ENST00000460741 MS4A3Q96HJ5 214 aa13.37□□□□□ -0.27
HOMER1-203ENST00000460741 ATMINO43313 823 aaPredicted RBP13.36□□□□□ -0.27
HOMER1-203ENST00000460741 C7P10643 843 aa13.36□□□□□ -0.27
HOMER1-203ENST00000460741 PRKCSHP14314 528 aaPredicted RBP13.35□□□□□ -0.27
HOMER1-203ENST00000460741 BCANQ96GW7 911 aa13.35□□□□□ -0.27
HOMER1-203ENST00000460741 POTEJP0CG39 1038 aa13.33□□□□□ -0.28
HOMER1-203ENST00000460741 MAMSTRQ6ZN01 415 aa13.33□□□□□ -0.28
HOMER1-203ENST00000460741 IFNLR1Q8IU57 520 aaPredicted RBP13.32□□□□□ -0.28
HOMER1-203ENST00000460741 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
HOMER1-203ENST00000460741 PKD2Q13563 968 aa13.25□□□□□ -0.29
HOMER1-203ENST00000460741 LCE2DQ5TA82 110 aaPredicted RBP13.25□□□□□ -0.29
HOMER1-203ENST00000460741 VSIG10Q8N0Z9 540 aa13.23□□□□□ -0.29
HOMER1-203ENST00000460741 TAOK2Q9UL54 1235 aa13.23□□□□□ -0.29
HOMER1-203ENST00000460741 SCUBE2Q9NQ36 999 aa13.22□□□□□ -0.29
HOMER1-203ENST00000460741 MIER1Q8N108 512 aa13.21□□□□□ -0.29
HOMER1-203ENST00000460741 ATN1P54259 1190 aaPredicted RBP13.2□□□□□ -0.3
HOMER1-203ENST00000460741 FAM163AQ96GL9 167 aaPredicted RBP13.18□□□□□ -0.3
HOMER1-203ENST00000460741 CCDC61Q9Y6R9 512 aa13.18□□□□□ -0.3
HOMER1-203ENST00000460741 PLCD3Q8N3E9 789 aa13.17□□□□□ -0.3
HOMER1-203ENST00000460741 TSPYL2Q9H2G4 693 aaPredicted RBP13.17□□□□□ -0.3
HOMER1-203ENST00000460741 KIF12Q96FN5 646 aa13.13□□□□□ -0.31
HOMER1-203ENST00000460741 ZBTB47Q9UFB7 747 aaPredicted RBP13.13□□□□□ -0.31
HOMER1-203ENST00000460741 POTEFA5A3E0 1075 aa13.11□□□□□ -0.31
HOMER1-203ENST00000460741 BMP2KQ9NSY1 1161 aaPredicted RBP13.1□□□□□ -0.31
HOMER1-203ENST00000460741 KDM2AQ9Y2K7 1162 aa13.08□□□□□ -0.32
HOMER1-203ENST00000460741 TPRNQ4KMQ1 711 aa13.07□□□□□ -0.32
HOMER1-203ENST00000460741 TIE1P35590 1138 aa13.06□□□□□ -0.32
HOMER1-203ENST00000460741 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.06□□□□□ -0.32
HOMER1-203ENST00000460741 TRPC6Q9Y210 931 aa13.05□□□□□ -0.32
HOMER1-203ENST00000460741 BBXQ8WY36 941 aaPredicted RBP13.04□□□□□ -0.32
HOMER1-203ENST00000460741 PAXIP1Q6ZW49 1069 aaPredicted RBP13.03□□□□□ -0.32
HOMER1-203ENST00000460741 ECM2O94769 699 aaPredicted RBP13.01□□□□□ -0.33
HOMER1-203ENST00000460741 CFAP44Q96MT7 982 aa13.01□□□□□ -0.33
HOMER1-203ENST00000460741 MAP3K13O43283 966 aa13□□□□□ -0.33
HOMER1-203ENST00000460741 KLHL34Q8N239 644 aa12.98□□□□□ -0.33
HOMER1-203ENST00000460741 SPOCK2Q92563 424 aa12.97□□□□□ -0.33
HOMER1-203ENST00000460741 COLQQ9Y215 455 aaPredicted RBP12.96□□□□□ -0.33
HOMER1-203ENST00000460741 TTLL13PA6NNM8 815 aa12.95□□□□□ -0.34
HOMER1-203ENST00000460741 SEC24BO95487 1268 aa12.95□□□□□ -0.34
HOMER1-203ENST00000460741 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
HOMER1-203ENST00000460741 RASEFQ8IZ41 740 aa12.92□□□□□ -0.34
HOMER1-203ENST00000460741 IER5LQ5T953 404 aa12.9□□□□□ -0.34
HOMER1-203ENST00000460741 NUBP1P53384 320 aa12.89□□□□□ -0.35
HOMER1-203ENST00000460741 RGL2O15211 777 aa12.87□□□□□ -0.35
HOMER1-203ENST00000460741 FAM212AQ96EL1 285 aa12.87□□□□□ -0.35
HOMER1-203ENST00000460741 TRIM35Q9UPQ4 493 aa12.87□□□□□ -0.35
HOMER1-203ENST00000460741 SGIP1Q9BQI5 828 aa12.86□□□□□ -0.35
HOMER1-203ENST00000460741 TSHZ2Q9NRE2 1034 aa12.85□□□□□ -0.35
HOMER1-203ENST00000460741 SPRYD3Q8NCJ5 442 aa12.82□□□□□ -0.36
HOMER1-203ENST00000460741 ST18O60284 1047 aa12.81□□□□□ -0.36
HOMER1-203ENST00000460741 SLAIN1Q8ND83 568 aa12.81□□□□□ -0.36
HOMER1-203ENST00000460741 PCDHB13Q9Y5F0 798 aa12.81□□□□□ -0.36
HOMER1-203ENST00000460741 DCAF8Q5TAQ9 597 aa12.74□□□□□ -0.37
HOMER1-203ENST00000460741 IFNL1Q8IU54 200 aa12.72□□□□□ -0.37
HOMER1-203ENST00000460741 CHGAP10645 457 aaKnown RBP12.71□□□□□ -0.37
HOMER1-203ENST00000460741 PLCG2P16885 1265 aa12.71□□□□□ -0.37
HOMER1-203ENST00000460741 GSE1Q14687 1217 aa12.71□□□□□ -0.37
HOMER1-203ENST00000460741 TMEM106CQ9BVX2 250 aa12.7□□□□□ -0.38
HOMER1-203ENST00000460741 TMEM121BQ9BXQ6 578 aaPredicted RBP12.67□□□□□ -0.38
HOMER1-203ENST00000460741 IRX5P78411 483 aaPredicted RBP12.66□□□□□ -0.38
HOMER1-203ENST00000460741 MMRN1Q13201 1228 aa12.66□□□□□ -0.38
HOMER1-203ENST00000460741 CIZ1Q9ULV3 898 aaPredicted RBP12.66□□□□□ -0.38
HOMER1-203ENST00000460741 NBR1Q14596 966 aa12.65□□□□□ -0.38
HOMER1-203ENST00000460741 SPNS2Q8IVW8 549 aa12.65□□□□□ -0.38
HOMER1-203ENST00000460741 SNPHO15079 494 aa12.6□□□□□ -0.39
HOMER1-203ENST00000460741 PYGBP11216 843 aa12.6□□□□□ -0.39
HOMER1-203ENST00000460741 DNAJC5Q9H3Z4 198 aa12.6□□□□□ -0.39
HOMER1-203ENST00000460741 OCEL1Q9H607 264 aa12.59□□□□□ -0.39
HOMER1-203ENST00000460741 CHRM1P11229 460 aaPredicted RBP12.55□□□□□ -0.4
HOMER1-203ENST00000460741 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.55□□□□□ -0.4
HOMER1-203ENST00000460741 ZNF467Q7Z7K2 595 aaPredicted RBP12.52□□□□□ -0.41
HOMER1-203ENST00000460741 HS6ST3Q8IZP7 471 aa12.52□□□□□ -0.41
HOMER1-203ENST00000460741 MARVELD3Q96A59 401 aa12.52□□□□□ -0.41
HOMER1-203ENST00000460741 TIMELESSQ9UNS1 1208 aa12.52□□□□□ -0.41
HOMER1-203ENST00000460741 TRIM41Q8WV44 630 aa12.5□□□□□ -0.41
HOMER1-203ENST00000460741 TULP1O00294 542 aaPredicted RBP12.48□□□□□ -0.41
HOMER1-203ENST00000460741 PCDHB8Q9UN66 801 aa12.47□□□□□ -0.41
HOMER1-203ENST00000460741 RNF25Q96BH1 459 aaPredicted RBP12.43□□□□□ -0.42
HOMER1-203ENST00000460741 EMP3P54852 163 aa12.41□□□□□ -0.42
HOMER1-203ENST00000460741 PDCD7Q8N8D1 485 aaKnown RBP12.4□□□□□ -0.42
HOMER1-203ENST00000460741 NKX1-1Q15270 411 aaPredicted RBP12.39□□□□□ -0.43
HOMER1-203ENST00000460741 GTF3C3Q9Y5Q9 886 aa12.39□□□□□ -0.43
HOMER1-203ENST00000460741 C3orf67Q6ZVT6 689 aa12.38□□□□□ -0.43
HOMER1-203ENST00000460741 PDAP1Q13442 181 aaKnown RBP12.36□□□□□ -0.43
HOMER1-203ENST00000460741 KRTAP3-3Q9BYR6 98 aa12.36□□□□□ -0.43
HOMER1-203ENST00000460741 KRTAP3-2Q9BYR7 98 aa12.36□□□□□ -0.43
HOMER1-203ENST00000460741 PSEN1P49768 467 aa12.35□□□□□ -0.43
HOMER1-203ENST00000460741 L3MBTL3Q96JM7 780 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms