RNA–Protein interactions for RNA: ENST00000460686.1

FAM228B-201, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 357 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-201ENST00000460686 FAM212AQ96EL1 285 aa14.43□□□□□ -0.1
FAM228B-201ENST00000460686 CCDC61Q9Y6R9 512 aa14.42□□□□□ -0.1
FAM228B-201ENST00000460686 IFNLR1Q8IU57 520 aaPredicted RBP14.4□□□□□ -0.1
FAM228B-201ENST00000460686 GALR2O43603 387 aaPredicted RBP14.38□□□□□ -0.11
FAM228B-201ENST00000460686 DCAF8Q5TAQ9 597 aa14.37□□□□□ -0.11
FAM228B-201ENST00000460686 SPOCK2Q92563 424 aa14.34□□□□□ -0.11
FAM228B-201ENST00000460686 DCBLD2Q96PD2 775 aa14.34□□□□□ -0.11
FAM228B-201ENST00000460686 KIF12Q96FN5 646 aa14.32□□□□□ -0.12
FAM228B-201ENST00000460686 MS4A3Q96HJ5 214 aa14.32□□□□□ -0.12
FAM228B-201ENST00000460686 MAP3K13O43283 966 aa14.28□□□□□ -0.12
FAM228B-201ENST00000460686 GSE1Q14687 1217 aa14.26□□□□□ -0.13
FAM228B-201ENST00000460686 POTEIP0CG38 1075 aa14.24□□□□□ -0.13
FAM228B-201ENST00000460686 PYGBP11216 843 aa14.22□□□□□ -0.13
FAM228B-201ENST00000460686 CIZ1Q9ULV3 898 aaPredicted RBP14.22□□□□□ -0.13
FAM228B-201ENST00000460686 PCDHB13Q9Y5F0 798 aa14.22□□□□□ -0.13
FAM228B-201ENST00000460686 SGIP1Q9BQI5 828 aa14.16□□□□□ -0.14
FAM228B-201ENST00000460686 IFNL1Q8IU54 200 aa14.12□□□□□ -0.15
FAM228B-201ENST00000460686 TRPC6Q9Y210 931 aa14.12□□□□□ -0.15
FAM228B-201ENST00000460686 ATMINO43313 823 aaPredicted RBP14.09□□□□□ -0.15
FAM228B-201ENST00000460686 ASTLQ6HA08 431 aaPredicted RBP14.08□□□□□ -0.16
FAM228B-201ENST00000460686 BMP2KQ9NSY1 1161 aaPredicted RBP14.07□□□□□ -0.16
FAM228B-201ENST00000460686 TIE1P35590 1138 aa14.06□□□□□ -0.16
FAM228B-201ENST00000460686 PCDHB8Q9UN66 801 aa14.06□□□□□ -0.16
FAM228B-201ENST00000460686 CHRM1P11229 460 aaPredicted RBP14.04□□□□□ -0.16
FAM228B-201ENST00000460686 ATN1P54259 1190 aaPredicted RBP14.04□□□□□ -0.16
FAM228B-201ENST00000460686 PELP1Q8IZL8 1130 aaKnown RBP14.04□□□□□ -0.16
FAM228B-201ENST00000460686 TTLL13PA6NNM8 815 aa14.01□□□□□ -0.17
FAM228B-201ENST00000460686 ZNF467Q7Z7K2 595 aaPredicted RBP14.01□□□□□ -0.17
FAM228B-201ENST00000460686 TMEM106CQ9BVX2 250 aa13.99□□□□□ -0.17
FAM228B-201ENST00000460686 TRIM41Q8WV44 630 aa13.98□□□□□ -0.17
FAM228B-201ENST00000460686 SLC39A7Q92504 469 aa13.98□□□□□ -0.17
FAM228B-201ENST00000460686 LHX8Q68G74 356 aa13.96□□□□□ -0.17
FAM228B-201ENST00000460686 METRNQ9UJH8 293 aa13.96□□□□□ -0.17
FAM228B-201ENST00000460686 C7P10643 843 aa13.94□□□□□ -0.18
FAM228B-201ENST00000460686 TRIM35Q9UPQ4 493 aa13.94□□□□□ -0.18
FAM228B-201ENST00000460686 PSEN1P49768 467 aa13.88□□□□□ -0.19
FAM228B-201ENST00000460686 PDAP1Q13442 181 aaKnown RBP13.86□□□□□ -0.19
FAM228B-201ENST00000460686 SEC24BO95487 1268 aa13.84□□□□□ -0.19
FAM228B-201ENST00000460686 ECM2O94769 699 aaPredicted RBP13.82□□□□□ -0.2
FAM228B-201ENST00000460686 GOLGA2Q08379 1002 aa13.82□□□□□ -0.2
FAM228B-201ENST00000460686 IER5LQ5T953 404 aa13.82□□□□□ -0.2
FAM228B-201ENST00000460686 RIOK3O14730 519 aaKnown RBP13.79□□□□□ -0.2
FAM228B-201ENST00000460686 POTEB2H3BUK9 544 aa13.78□□□□□ -0.2
FAM228B-201ENST00000460686 PKD2Q13563 968 aa13.77□□□□□ -0.21
FAM228B-201ENST00000460686 RNF25Q96BH1 459 aaPredicted RBP13.77□□□□□ -0.21
FAM228B-201ENST00000460686 COLQQ9Y215 455 aaPredicted RBP13.77□□□□□ -0.21
FAM228B-201ENST00000460686 POTEFA5A3E0 1075 aa13.75□□□□□ -0.21
FAM228B-201ENST00000460686 PLCG2P16885 1265 aa13.75□□□□□ -0.21
FAM228B-201ENST00000460686 MKRN3Q13064 507 aaKnown RBP13.75□□□□□ -0.21
FAM228B-201ENST00000460686 CABP2Q9NPB3 220 aa13.73□□□□□ -0.21
FAM228B-201ENST00000460686 VGFO15240 615 aaPredicted RBP13.72□□□□□ -0.21
FAM228B-201ENST00000460686 IRX5P78411 483 aaPredicted RBP13.69□□□□□ -0.22
FAM228B-201ENST00000460686 TAOK2Q9UL54 1235 aa13.69□□□□□ -0.22
FAM228B-201ENST00000460686 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.68□□□□□ -0.22
FAM228B-201ENST00000460686 ZFP91Q96JP5 570 aaPredicted RBP13.68□□□□□ -0.22
FAM228B-201ENST00000460686 OCEL1Q9H607 264 aa13.68□□□□□ -0.22
FAM228B-201ENST00000460686 RGL2O15211 777 aa13.66□□□□□ -0.22
FAM228B-201ENST00000460686 POTEJP0CG39 1038 aa13.66□□□□□ -0.22
FAM228B-201ENST00000460686 MAMSTRQ6ZN01 415 aa13.65□□□□□ -0.22
FAM228B-201ENST00000460686 OTUD5Q96G74 571 aa13.65□□□□□ -0.22
FAM228B-201ENST00000460686 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.64□□□□□ -0.23
FAM228B-201ENST00000460686 SCUBE2Q9NQ36 999 aa13.62□□□□□ -0.23
FAM228B-201ENST00000460686 EFCAB3Q8N7B9 438 aa13.59□□□□□ -0.23
FAM228B-201ENST00000460686 BCL11BQ9C0K0 894 aaPredicted RBP13.58□□□□□ -0.24
FAM228B-201ENST00000460686 STK25O00506 426 aa13.57□□□□□ -0.24
FAM228B-201ENST00000460686 STK24Q9Y6E0 443 aa13.57□□□□□ -0.24
FAM228B-201ENST00000460686 PDCD7Q8N8D1 485 aaKnown RBP13.56□□□□□ -0.24
FAM228B-201ENST00000460686 L3MBTL3Q96JM7 780 aaPredicted RBP13.49□□□□□ -0.25
FAM228B-201ENST00000460686 SOX12O15370 315 aa13.48□□□□□ -0.25
FAM228B-201ENST00000460686 DPY19L2Q6NUT2 758 aa13.48□□□□□ -0.25
FAM228B-201ENST00000460686 ILDR1Q86SU0 546 aaPredicted RBP13.48□□□□□ -0.25
FAM228B-201ENST00000460686 G3V3G9 751 aa13.47□□□□□ -0.25
FAM228B-201ENST00000460686 PHF8Q9UPP1 1060 aa13.45□□□□□ -0.26
FAM228B-201ENST00000460686 C3orf67Q6ZVT6 689 aa13.44□□□□□ -0.26
FAM228B-201ENST00000460686 SLAIN1Q8ND83 568 aa13.44□□□□□ -0.26
FAM228B-201ENST00000460686 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.44□□□□□ -0.26
FAM228B-201ENST00000460686 BOLA1Q9Y3E2 137 aa13.41□□□□□ -0.26
FAM228B-201ENST00000460686 DCAF8L2P0C7V8 631 aa13.39□□□□□ -0.27
FAM228B-201ENST00000460686 CHGAP10645 457 aaKnown RBP13.39□□□□□ -0.27
FAM228B-201ENST00000460686 NLRP6P59044 892 aa13.39□□□□□ -0.27
FAM228B-201ENST00000460686 HS6ST3Q8IZP7 471 aa13.36□□□□□ -0.27
FAM228B-201ENST00000460686 MS4A4AQ96JQ5 239 aa13.36□□□□□ -0.27
FAM228B-201ENST00000460686 MFRPQ9BY79 579 aa13.34□□□□□ -0.27
FAM228B-201ENST00000460686 FBXO22Q8NEZ5 403 aa13.32□□□□□ -0.28
FAM228B-201ENST00000460686 AMER1Q5JTC6 1135 aaPredicted RBP13.3□□□□□ -0.28
FAM228B-201ENST00000460686 MICALL2Q8IY33 904 aa13.29□□□□□ -0.28
FAM228B-201ENST00000460686 FAM163AQ96GL9 167 aaPredicted RBP13.29□□□□□ -0.28
FAM228B-201ENST00000460686 TMEM121BQ9BXQ6 578 aaPredicted RBP13.27□□□□□ -0.29
FAM228B-201ENST00000460686 RTN4Q9NQC3 1192 aaKnown RBP13.24□□□□□ -0.29
FAM228B-201ENST00000460686 SNPHO15079 494 aa13.2□□□□□ -0.3
FAM228B-201ENST00000460686 NKX1-1Q15270 411 aaPredicted RBP13.16□□□□□ -0.3
FAM228B-201ENST00000460686 DNAJC5Q9H3Z4 198 aa13.15□□□□□ -0.3
FAM228B-201ENST00000460686 PPP1R37O75864 691 aa13.14□□□□□ -0.31
FAM228B-201ENST00000460686 LCE2DQ5TA82 110 aaPredicted RBP13.13□□□□□ -0.31
FAM228B-201ENST00000460686 TMEM92Q6UXU6 159 aa13.13□□□□□ -0.31
FAM228B-201ENST00000460686 POTEMA6NI47 508 aa13.12□□□□□ -0.31
FAM228B-201ENST00000460686 ST18O60284 1047 aa13.12□□□□□ -0.31
FAM228B-201ENST00000460686 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
FAM228B-201ENST00000460686 RYDENQ9NUL5 291 aaKnown RBP13.12□□□□□ -0.31
FAM228B-201ENST00000460686 DOK7Q18PE1 504 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms