RNA–Protein interactions for RNA: ENST00000460669.5

RBBP4-207, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-207ENST00000460669 PHF12Q96QT6 1004 aa9.29□□□□□ -0.92
RBBP4-207ENST00000460669 NPM1P06748 294 aaKnown RBP eCLIP9.26□□□□□ -0.93
RBBP4-207ENST00000460669 CLCN6P51797 869 aa9.26□□□□□ -0.93
RBBP4-207ENST00000460669 DCBLD2Q96PD2 775 aa9.24□□□□□ -0.93
RBBP4-207ENST00000460669 PAK3O75914 559 aaPredicted RBP9.22□□□□□ -0.93
RBBP4-207ENST00000460669 PKD2Q13563 968 aa9.2□□□□□ -0.94
RBBP4-207ENST00000460669 NUBP1P53384 320 aa9.19□□□□□ -0.94
RBBP4-207ENST00000460669 TSPYL2Q9H2G4 693 aaPredicted RBP9.17□□□□□ -0.94
RBBP4-207ENST00000460669 PELP1Q8IZL8 1130 aaKnown RBP9.15□□□□□ -0.94
RBBP4-207ENST00000460669 MS4A3Q96HJ5 214 aa9.15□□□□□ -0.94
RBBP4-207ENST00000460669 GSE1Q14687 1217 aa9.12□□□□□ -0.95
RBBP4-207ENST00000460669 RASEFQ8IZ41 740 aa9.12□□□□□ -0.95
RBBP4-207ENST00000460669 CIZ1Q9ULV3 898 aaPredicted RBP9.12□□□□□ -0.95
RBBP4-207ENST00000460669 CCDC61Q9Y6R9 512 aa9.12□□□□□ -0.95
RBBP4-207ENST00000460669 POTEB2H3BUK9 544 aa9.11□□□□□ -0.95
RBBP4-207ENST00000460669 FAM212AQ96EL1 285 aa9.11□□□□□ -0.95
RBBP4-207ENST00000460669 DCAF8Q5TAQ9 597 aa9.1□□□□□ -0.95
RBBP4-207ENST00000460669 ECM2O94769 699 aaPredicted RBP9.09□□□□□ -0.95
RBBP4-207ENST00000460669 TRIM41Q8WV44 630 aa9.09□□□□□ -0.95
RBBP4-207ENST00000460669 KIF12Q96FN5 646 aa9.07□□□□□ -0.96
RBBP4-207ENST00000460669 ATMINO43313 823 aaPredicted RBP9.06□□□□□ -0.96
RBBP4-207ENST00000460669 ASTLQ6HA08 431 aaPredicted RBP9.05□□□□□ -0.96
RBBP4-207ENST00000460669 TRPC6Q9Y210 931 aa9.05□□□□□ -0.96
RBBP4-207ENST00000460669 MAP3K13O43283 966 aa9.03□□□□□ -0.96
RBBP4-207ENST00000460669 OTUD5Q96G74 571 aa9.03□□□□□ -0.96
RBBP4-207ENST00000460669 RGL2O15211 777 aa9.01□□□□□ -0.97
RBBP4-207ENST00000460669 CHRM1P11229 460 aaPredicted RBP9□□□□□ -0.97
RBBP4-207ENST00000460669 ATN1P54259 1190 aaPredicted RBP9□□□□□ -0.97
RBBP4-207ENST00000460669 POTEJP0CG39 1038 aa8.99□□□□□ -0.97
RBBP4-207ENST00000460669 METRNQ9UJH8 293 aa8.99□□□□□ -0.97
RBBP4-207ENST00000460669 PYGBP11216 843 aa8.98□□□□□ -0.97
RBBP4-207ENST00000460669 BMP2KQ9NSY1 1161 aaPredicted RBP8.98□□□□□ -0.97
RBBP4-207ENST00000460669 RNF25Q96BH1 459 aaPredicted RBP8.97□□□□□ -0.97
RBBP4-207ENST00000460669 DCAF8L2P0C7V8 631 aa8.96□□□□□ -0.98
RBBP4-207ENST00000460669 SLC39A7Q92504 469 aa8.96□□□□□ -0.98
RBBP4-207ENST00000460669 C7P10643 843 aa8.95□□□□□ -0.98
RBBP4-207ENST00000460669 POTEFA5A3E0 1075 aa8.93□□□□□ -0.98
RBBP4-207ENST00000460669 RIOK3O14730 519 aaKnown RBP8.92□□□□□ -0.98
RBBP4-207ENST00000460669 TIE1P35590 1138 aa8.9□□□□□ -0.98
RBBP4-207ENST00000460669 PCDHB13Q9Y5F0 798 aa8.9□□□□□ -0.98
RBBP4-207ENST00000460669 TTLL13PA6NNM8 815 aa8.89□□□□□ -0.99
RBBP4-207ENST00000460669 IFNL1Q8IU54 200 aa8.89□□□□□ -0.99
RBBP4-207ENST00000460669 TAOK2Q9UL54 1235 aa8.88□□□□□ -0.99
RBBP4-207ENST00000460669 ZNF467Q7Z7K2 595 aaPredicted RBP8.87□□□□□ -0.99
RBBP4-207ENST00000460669 VGFO15240 615 aaPredicted RBP8.86□□□□□ -0.99
RBBP4-207ENST00000460669 SGIP1Q9BQI5 828 aa8.86□□□□□ -0.99
RBBP4-207ENST00000460669 COLQQ9Y215 455 aaPredicted RBP8.86□□□□□ -0.99
RBBP4-207ENST00000460669 HS6ST3Q8IZP7 471 aa8.85□□□□□ -0.99
RBBP4-207ENST00000460669 CHGAP10645 457 aaKnown RBP8.83□□□□□ -1
RBBP4-207ENST00000460669 PCDHB8Q9UN66 801 aa8.83□□□□□ -1
RBBP4-207ENST00000460669 TRIM35Q9UPQ4 493 aa8.83□□□□□ -1
RBBP4-207ENST00000460669 BBXQ8WY36 941 aaPredicted RBP8.81□□□□□ -1
RBBP4-207ENST00000460669 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.8□□□□□ -1
RBBP4-207ENST00000460669 ZFP91Q96JP5 570 aaPredicted RBP8.8□□□□□ -1
RBBP4-207ENST00000460669 TMEM106CQ9BVX2 250 aa8.8□□□□□ -1
RBBP4-207ENST00000460669 PDAP1Q13442 181 aaKnown RBP8.79□□□□□ -1
RBBP4-207ENST00000460669 DNAJC5Q9H3Z4 198 aa8.79□□□□□ -1
RBBP4-207ENST00000460669 STK25O00506 426 aa8.78□□□□□ -1
RBBP4-207ENST00000460669 MAMSTRQ6ZN01 415 aa8.78□□□□□ -1
RBBP4-207ENST00000460669 SEC24BO95487 1268 aa8.77□□□□□ -1.01
RBBP4-207ENST00000460669 PSEN1P49768 467 aa8.76□□□□□ -1.01
RBBP4-207ENST00000460669 BCL11BQ9C0K0 894 aaPredicted RBP8.76□□□□□ -1.01
RBBP4-207ENST00000460669 POTEMA6NI47 508 aa8.75□□□□□ -1.01
RBBP4-207ENST00000460669 PLCB2Q00722 1185 aa8.75□□□□□ -1.01
RBBP4-207ENST00000460669 IER5LQ5T953 404 aa8.75□□□□□ -1.01
RBBP4-207ENST00000460669 LCE2DQ5TA82 110 aaPredicted RBP8.75□□□□□ -1.01
RBBP4-207ENST00000460669 SCUBE2Q9NQ36 999 aa8.75□□□□□ -1.01
RBBP4-207ENST00000460669 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.75□□□□□ -1.01
RBBP4-207ENST00000460669 STK24Q9Y6E0 443 aa8.74□□□□□ -1.01
RBBP4-207ENST00000460669 POTEGQ6S5H5 508 aa8.73□□□□□ -1.01
RBBP4-207ENST00000460669 SLC24A1O60721 1099 aa8.72□□□□□ -1.01
RBBP4-207ENST00000460669 FAM163AQ96GL9 167 aaPredicted RBP8.71□□□□□ -1.02
RBBP4-207ENST00000460669 IRX5P78411 483 aaPredicted RBP8.7□□□□□ -1.02
RBBP4-207ENST00000460669 NKX1-1Q15270 411 aaPredicted RBP8.7□□□□□ -1.02
RBBP4-207ENST00000460669 PLSCR2Q9NRY7 297 aa8.7□□□□□ -1.02
RBBP4-207ENST00000460669 PLCG2P16885 1265 aa8.67□□□□□ -1.02
RBBP4-207ENST00000460669 GOLGA2Q08379 1002 aa8.67□□□□□ -1.02
RBBP4-207ENST00000460669 PAXIP1Q6ZW49 1069 aaPredicted RBP8.67□□□□□ -1.02
RBBP4-207ENST00000460669 SPRYD3Q8NCJ5 442 aa8.66□□□□□ -1.02
RBBP4-207ENST00000460669 CABP2Q9NPB3 220 aa8.66□□□□□ -1.02
RBBP4-207ENST00000460669 CFAP44Q96MT7 982 aa8.64□□□□□ -1.03
RBBP4-207ENST00000460669 GTPBP6O43824 516 aaPredicted RBP8.63□□□□□ -1.03
RBBP4-207ENST00000460669 OCEL1Q9H607 264 aa8.63□□□□□ -1.03
RBBP4-207ENST00000460669 SLAIN1Q8ND83 568 aa8.62□□□□□ -1.03
RBBP4-207ENST00000460669 RYDENQ9NUL5 291 aaKnown RBP8.62□□□□□ -1.03
RBBP4-207ENST00000460669 EFCAB3Q8N7B9 438 aa8.61□□□□□ -1.03
RBBP4-207ENST00000460669 MKRN3Q13064 507 aaKnown RBP8.6□□□□□ -1.03
RBBP4-207ENST00000460669 MFRPQ9BY79 579 aa8.6□□□□□ -1.03
RBBP4-207ENST00000460669 SOX12O15370 315 aa8.59□□□□□ -1.03
RBBP4-207ENST00000460669 HAP1P54257 671 aaPredicted RBP8.59□□□□□ -1.03
RBBP4-207ENST00000460669 PDCD7Q8N8D1 485 aaKnown RBP8.59□□□□□ -1.03
RBBP4-207ENST00000460669 FBXO22Q8NEZ5 403 aa8.56□□□□□ -1.04
RBBP4-207ENST00000460669 NLRP6P59044 892 aa8.55□□□□□ -1.04
RBBP4-207ENST00000460669 ST18O60284 1047 aa8.54□□□□□ -1.04
RBBP4-207ENST00000460669 PHF8Q9UPP1 1060 aa8.54□□□□□ -1.04
RBBP4-207ENST00000460669 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.53□□□□□ -1.045e-7■□□□□ 9.7
RBBP4-207ENST00000460669 DPY19L2Q6NUT2 758 aa8.52□□□□□ -1.05
RBBP4-207ENST00000460669 ILDR1Q86SU0 546 aaPredicted RBP8.52□□□□□ -1.05
RBBP4-207ENST00000460669 TSHZ2Q9NRE2 1034 aa8.52□□□□□ -1.05
RBBP4-207ENST00000460669 PCDH10Q9P2E7 1040 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms