RNA–Protein interactions for RNA: ENST00000459877.1

KCNC4-205, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 7,597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-205ENST00000459877 PPP1R15AO75807 674 aaPredicted RBP12.19□□□□□ -0.46
KCNC4-205ENST00000459877 NCLP19338 710 aaKnown RBP12.19□□□□□ -0.46
KCNC4-205ENST00000459877 GLIPR1L2Q4G1C9 344 aa12.19□□□□□ -0.46
KCNC4-205ENST00000459877 NCBP3Q53F19 620 aaKnown RBP12.18□□□□□ -0.46
KCNC4-205ENST00000459877 PPM1GO15355 546 aaPredicted RBP12.18□□□□□ -0.46
KCNC4-205ENST00000459877 CSRNP3Q8WYN3 585 aa12.18□□□□□ -0.46
KCNC4-205ENST00000459877 ARID4BQ4LE39 1312 aaPredicted RBP12.17□□□□□ -0.46
KCNC4-205ENST00000459877 MRS2Q9HD23 443 aa12.16□□□□□ -0.46
KCNC4-205ENST00000459877 KCNH8Q96L42 1107 aa12.16□□□□□ -0.46
KCNC4-205ENST00000459877 LAS1LQ9Y4W2 734 aaKnown RBP12.16□□□□□ -0.46
KCNC4-205ENST00000459877 NPHP1O15259 732 aa12.15□□□□□ -0.46
KCNC4-205ENST00000459877 LMOD2Q6P5Q4 547 aa12.11□□□□□ -0.47
KCNC4-205ENST00000459877 RRP7BPQ9NSQ0 103 aa12.1□□□□□ -0.47
KCNC4-205ENST00000459877 RGL3Q3MIN7 710 aa12.09□□□□□ -0.47
KCNC4-205ENST00000459877 TRIM44Q96DX7 344 aaPredicted RBP12.09□□□□□ -0.47
KCNC4-205ENST00000459877 CHMP7Q8WUX9 453 aaPredicted RBP12.08□□□□□ -0.48
KCNC4-205ENST00000459877 TSPY4P0CV99 314 aa12.08□□□□□ -0.48
KCNC4-205ENST00000459877 TSPY10P0CW01 314 aa12.08□□□□□ -0.48
KCNC4-205ENST00000459877 ZRSR1Q15695 479 aaKnown RBP12.08□□□□□ -0.48
KCNC4-205ENST00000459877 PTMAP06454 111 aaKnown RBP12.07□□□□□ -0.48
KCNC4-205ENST00000459877 DNTTIP2Q5QJE6 756 aaKnown RBP12.06□□□□□ -0.48
KCNC4-205ENST00000459877 NEUROD2Q15784 382 aa12.05□□□□□ -0.48
KCNC4-205ENST00000459877 NAP1L2Q9ULW6 460 aaPredicted RBP12.05□□□□□ -0.48
KCNC4-205ENST00000459877 CLSTN1O94985 981 aa12.05□□□□□ -0.48
KCNC4-205ENST00000459877 TNNT2P45379 298 aaPredicted RBP12.05□□□□□ -0.48
KCNC4-205ENST00000459877 BECN1Q14457 450 aa12.05□□□□□ -0.48
KCNC4-205ENST00000459877 CASC1Q6TDU7 716 aa12.04□□□□□ -0.48
KCNC4-205ENST00000459877 FTSJ3Q8IY81 847 aaKnown RBP12.04□□□□□ -0.48
KCNC4-205ENST00000459877 PLCB2Q00722 1185 aa12.03□□□□□ -0.48
KCNC4-205ENST00000459877 MTUS2Q5JR59 1369 aa12.03□□□□□ -0.48
KCNC4-205ENST00000459877 DDRGK1Q96HY6 314 aa12.01□□□□□ -0.49
KCNC4-205ENST00000459877 MIER1Q8N108 512 aa12□□□□□ -0.49
KCNC4-205ENST00000459877 GOLGA6L22H0YM25 854 aa12□□□□□ -0.49
KCNC4-205ENST00000459877 OS9Q13438 667 aaPredicted RBP11.99□□□□□ -0.49
KCNC4-205ENST00000459877 RTN4Q9NQC3 1192 aaKnown RBP11.98□□□□□ -0.49
KCNC4-205ENST00000459877 SOX12O15370 315 aa11.98□□□□□ -0.49
KCNC4-205ENST00000459877 GOLGA2Q08379 1002 aa11.97□□□□□ -0.49
KCNC4-205ENST00000459877 EIF4G2P78344 907 aaKnown RBP eCLIP11.96□□□□□ -0.5
KCNC4-205ENST00000459877 AMER1Q5JTC6 1135 aaPredicted RBP11.96□□□□□ -0.5
KCNC4-205ENST00000459877 CC2D1BQ5T0F9 858 aaKnown RBP11.96□□□□□ -0.5
KCNC4-205ENST00000459877 FRAT1Q92837 279 aaPredicted RBP11.96□□□□□ -0.5
KCNC4-205ENST00000459877 CFAP53Q96M91 514 aa11.96□□□□□ -0.5
KCNC4-205ENST00000459877 ISY1Q9ULR0 285 aaKnown RBP11.96□□□□□ -0.5
KCNC4-205ENST00000459877 KNSTRNQ9Y448 316 aa11.94□□□□□ -0.5
KCNC4-205ENST00000459877 FGD1P98174 961 aa11.94□□□□□ -0.5
KCNC4-205ENST00000459877 SPRYD3Q8NCJ5 442 aa11.93□□□□□ -0.5
KCNC4-205ENST00000459877 NAP1L5Q96NT1 182 aaPredicted RBP11.93□□□□□ -0.5
KCNC4-205ENST00000459877 POGKQ9P215 609 aa11.93□□□□□ -0.5
KCNC4-205ENST00000459877 MAPK8IP3Q9UPT6 1336 aa11.93□□□□□ -0.5
KCNC4-205ENST00000459877 RGS3P49796 1198 aa11.92□□□□□ -0.5
KCNC4-205ENST00000459877 HSP90AB1P08238 724 aaKnown RBP11.92□□□□□ -0.5
KCNC4-205ENST00000459877 KCNJ4P48050 445 aa11.91□□□□□ -0.5
KCNC4-205ENST00000459877 U2SURPO15042 1029 aaKnown RBP11.91□□□□□ -0.5
KCNC4-205ENST00000459877 SUPT16HQ9Y5B9 1047 aaKnown RBP11.9□□□□□ -0.5
KCNC4-205ENST00000459877 TRHP20396 242 aaPredicted RBP11.9□□□□□ -0.51
KCNC4-205ENST00000459877 MLECQ14165 292 aa11.89□□□□□ -0.51
KCNC4-205ENST00000459877 CARD11Q9BXL7 1154 aa11.88□□□□□ -0.51
KCNC4-205ENST00000459877 ZCCHC6Q5VYS8 1495 aaKnown RBP11.88□□□□□ -0.51
KCNC4-205ENST00000459877 GOLGA6L6A8MZA4 724 aa11.86□□□□□ -0.51
KCNC4-205ENST00000459877 SAFB2Q14151 953 aaKnown RBP eCLIP11.86□□□□□ -0.51
KCNC4-205ENST00000459877 PLEKHD1A6NEE1 506 aa11.85□□□□□ -0.51
KCNC4-205ENST00000459877 DRC7Q8IY82 874 aa11.83□□□□□ -0.51
KCNC4-205ENST00000459877 ERICH6BQ5W0A0 696 aa11.83□□□□□ -0.52
KCNC4-205ENST00000459877 APBB1O00213 710 aa11.83□□□□□ -0.52
KCNC4-205ENST00000459877 ANO8Q9HCE9 1232 aaPredicted RBP11.83□□□□□ -0.52
KCNC4-205ENST00000459877 ZNF330Q9Y3S2 320 aaPredicted RBP11.82□□□□□ -0.52
KCNC4-205ENST00000459877 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.82□□□□□ -0.52
KCNC4-205ENST00000459877 ANP32EQ9BTT0 268 aa11.82□□□□□ -0.52
KCNC4-205ENST00000459877 NUDCQ9Y266 331 aa11.81□□□□□ -0.52
KCNC4-205ENST00000459877 PDE4CQ08493 712 aa11.81□□□□□ -0.52
KCNC4-205ENST00000459877 PRM3Q9NNZ6 103 aa11.81□□□□□ -0.52
KCNC4-205ENST00000459877 CLIP1P30622 1438 aa11.81□□□□□ -0.52
KCNC4-205ENST00000459877 EIF4G1Q04637 1599 aaKnown RBP11.81□□□□□ -0.52
KCNC4-205ENST00000459877 GNL2Q13823 731 aaKnown RBP11.8□□□□□ -0.52
KCNC4-205ENST00000459877 CFDP1Q9UEE9 299 aaPredicted RBP11.8□□□□□ -0.52
KCNC4-205ENST00000459877 PAK3O75914 559 aaPredicted RBP11.79□□□□□ -0.52
KCNC4-205ENST00000459877 ERCC6Q03468 1493 aa11.79□□□□□ -0.52
KCNC4-205ENST00000459877 CDCA8Q53HL2 280 aa11.79□□□□□ -0.52
KCNC4-205ENST00000459877 GOLGA6L4A6NEF3 574 aa11.79□□□□□ -0.52
KCNC4-205ENST00000459877 DCAF1Q9Y4B6 1507 aa11.78□□□□□ -0.52
KCNC4-205ENST00000459877 ARID3AQ99856 593 aa11.78□□□□□ -0.52
KCNC4-205ENST00000459877 SRPK2P78362 688 aaKnown RBP11.78□□□□□ -0.52
KCNC4-205ENST00000459877 RSF1Q96T23 1441 aaPredicted RBP11.78□□□□□ -0.52
KCNC4-205ENST00000459877 STK26Q9P289 416 aa11.77□□□□□ -0.52
KCNC4-205ENST00000459877 B4GALNT3Q6L9W6 998 aa11.75□□□□□ -0.53
KCNC4-205ENST00000459877 HSCBQ8IWL3 235 aa11.75□□□□□ -0.53
KCNC4-205ENST00000459877 SIN3AQ96ST3 1273 aa11.75□□□□□ -0.53
KCNC4-205ENST00000459877 CCDC9Q9Y3X0 531 aaKnown RBP11.74□□□□□ -0.53
KCNC4-205ENST00000459877 RTF1Q92541 710 aaKnown RBP11.73□□□□□ -0.53
KCNC4-205ENST00000459877 NOP58Q9Y2X3 529 aaKnown RBP11.73□□□□□ -0.53
KCNC4-205ENST00000459877 NOC3LQ8WTT2 800 aaKnown RBP11.72□□□□□ -0.53
KCNC4-205ENST00000459877 DCAF11Q8TEB1 546 aa11.72□□□□□ -0.53
KCNC4-205ENST00000459877 CHMP3Q9Y3E7 222 aa11.71□□□□□ -0.53
KCNC4-205ENST00000459877 MCCP23508 829 aa11.71□□□□□ -0.53
KCNC4-205ENST00000459877 PNNQ9H307 717 aaKnown RBP11.71□□□□□ -0.53
KCNC4-205ENST00000459877 CSB-PGBD3P0DP91 1061 aa11.71□□□□□ -0.54
KCNC4-205ENST00000459877 HSP90B1P14625 803 aaKnown RBP11.71□□□□□ -0.54
KCNC4-205ENST00000459877 CHAF1AQ13111 956 aaPredicted RBP11.7□□□□□ -0.54
KCNC4-205ENST00000459877 MSNP26038 577 aaKnown RBP11.7□□□□□ -0.54
KCNC4-205ENST00000459877 KIAA2012Q0VF49 1180 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms