RNA–Protein interactions for RNA: ENST00000459706.1

DDX1-204, Transcript of DEAD-box helicase 1, humanhuman

TSL 3

Gene DDX1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-204ENST00000459706 DCAF8Q5TAQ9 597 aa12.11□□□□□ -0.47
DDX1-204ENST00000459706 CREBZFQ9NS37 354 aa12.11□□□□□ -0.47
DDX1-204ENST00000459706 HS6ST3Q8IZP7 471 aa12.1□□□□□ -0.47
DDX1-204ENST00000459706 FAM212AQ96EL1 285 aa12.1□□□□□ -0.47
DDX1-204ENST00000459706 CFAP44Q96MT7 982 aa12.1□□□□□ -0.47
DDX1-204ENST00000459706 CHRM1P11229 460 aaPredicted RBP12.09□□□□□ -0.47
DDX1-204ENST00000459706 BCANQ96GW7 911 aa12.09□□□□□ -0.47
DDX1-204ENST00000459706 MNX1P50219 401 aaPredicted RBP12.06□□□□□ -0.48
DDX1-204ENST00000459706 RIOK3O14730 519 aaKnown RBP12.03□□□□□ -0.48
DDX1-204ENST00000459706 SGIP1Q9BQI5 828 aa11.99□□□□□ -0.49
DDX1-204ENST00000459706 VGFO15240 615 aaPredicted RBP11.98□□□□□ -0.49
DDX1-204ENST00000459706 RNF25Q96BH1 459 aaPredicted RBP11.98□□□□□ -0.49
DDX1-204ENST00000459706 PITPNM1O00562 1244 aa11.97□□□□□ -0.49
DDX1-204ENST00000459706 KDM2AQ9Y2K7 1162 aa11.96□□□□□ -0.49
DDX1-204ENST00000459706 RASEFQ8IZ41 740 aa11.92□□□□□ -0.5
DDX1-204ENST00000459706 RYDENQ9NUL5 291 aaKnown RBP11.92□□□□□ -0.5
DDX1-204ENST00000459706 TSHZ2Q9NRE2 1034 aa11.91□□□□□ -0.5
DDX1-204ENST00000459706 STK25O00506 426 aa11.87□□□□□ -0.51
DDX1-204ENST00000459706 GTPBP6O43824 516 aaPredicted RBP11.82□□□□□ -0.52
DDX1-204ENST00000459706 NKX1-1Q15270 411 aaPredicted RBP11.81□□□□□ -0.52
DDX1-204ENST00000459706 ZNF467Q7Z7K2 595 aaPredicted RBP11.81□□□□□ -0.52
DDX1-204ENST00000459706 PYGBP11216 843 aa11.8□□□□□ -0.52
DDX1-204ENST00000459706 FARP1Q9Y4F1 1045 aaPredicted RBP11.8□□□□□ -0.52
DDX1-204ENST00000459706 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.78□□□□□ -0.52
DDX1-204ENST00000459706 ZFP91Q96JP5 570 aaPredicted RBP11.78□□□□□ -0.52
DDX1-204ENST00000459706 BCL11BQ9C0K0 894 aaPredicted RBP11.77□□□□□ -0.53
DDX1-204ENST00000459706 STK24Q9Y6E0 443 aa11.77□□□□□ -0.53
DDX1-204ENST00000459706 POTEHQ6S545 545 aa11.73□□□□□ -0.53
DDX1-204ENST00000459706 FXR2P51116 673 aaKnown RBP eCLIP11.72□□□□□ -0.53
DDX1-204ENST00000459706 CHADLQ6NUI6 762 aa11.72□□□□□ -0.53
DDX1-204ENST00000459706 TSPYL2Q9H2G4 693 aaPredicted RBP11.71□□□□□ -0.53
DDX1-204ENST00000459706 PRKAR2AP13861 404 aaKnown RBP11.7□□□□□ -0.54
DDX1-204ENST00000459706 PDAP1Q13442 181 aaKnown RBP11.7□□□□□ -0.54
DDX1-204ENST00000459706 PAK3O75914 559 aaPredicted RBP11.69□□□□□ -0.54
DDX1-204ENST00000459706 NBR1Q14596 966 aa11.68□□□□□ -0.54
DDX1-204ENST00000459706 ZNF579Q8NAF0 562 aaKnown RBP11.68□□□□□ -0.54
DDX1-204ENST00000459706 CCDC61Q9Y6R9 512 aa11.67□□□□□ -0.54
DDX1-204ENST00000459706 PSEN1P49768 467 aa11.58□□□□□ -0.56
DDX1-204ENST00000459706 TPRNQ4KMQ1 711 aa11.57□□□□□ -0.56
DDX1-204ENST00000459706 CHRDL2Q6WN34 429 aa11.57□□□□□ -0.56
DDX1-204ENST00000459706 PCDHB8Q9UN66 801 aa11.57□□□□□ -0.56
DDX1-204ENST00000459706 PCDHB13Q9Y5F0 798 aa11.57□□□□□ -0.56
DDX1-204ENST00000459706 PRKCSHP14314 528 aaPredicted RBP11.55□□□□□ -0.56
DDX1-204ENST00000459706 P3H3Q8IVL6 736 aa11.55□□□□□ -0.56
DDX1-204ENST00000459706 SOX12O15370 315 aa11.52□□□□□ -0.57
DDX1-204ENST00000459706 PIP4P2Q8N4L2 257 aa11.52□□□□□ -0.57
DDX1-204ENST00000459706 KIF12Q96FN5 646 aa11.52□□□□□ -0.57
DDX1-204ENST00000459706 WDR70Q9NW82 654 aa11.5□□□□□ -0.57
DDX1-204ENST00000459706 NLRP6P59044 892 aa11.48□□□□□ -0.57
DDX1-204ENST00000459706 IFNL1Q8IU54 200 aa11.48□□□□□ -0.57
DDX1-204ENST00000459706 MAP3K13O43283 966 aa11.47□□□□□ -0.57
DDX1-204ENST00000459706 MFRPQ9BY79 579 aa11.47□□□□□ -0.57
DDX1-204ENST00000459706 ZRANB1Q9UGI0 708 aa11.42□□□□□ -0.58
DDX1-204ENST00000459706 CD44P16070 742 aaKnown RBP11.4□□□□□ -0.58
DDX1-204ENST00000459706 EFCAB3Q8N7B9 438 aa11.4□□□□□ -0.58
DDX1-204ENST00000459706 FBXO22Q8NEZ5 403 aa11.4□□□□□ -0.58
DDX1-204ENST00000459706 CABP2Q9NPB3 220 aa11.4□□□□□ -0.58
DDX1-204ENST00000459706 CADPS2Q86UW7 1296 aa11.36□□□□□ -0.59
DDX1-204ENST00000459706 CCDC180Q9P1Z9 1646 aa11.34□□□□□ -0.59
DDX1-204ENST00000459706 GOLGA2Q08379 1002 aa11.33□□□□□ -0.6
DDX1-204ENST00000459706 ARHGEF1Q92888 912 aaKnown RBP11.33□□□□□ -0.6
DDX1-204ENST00000459706 PHF8Q9UPP1 1060 aa11.33□□□□□ -0.6
DDX1-204ENST00000459706 CLCN6P51797 869 aa11.31□□□□□ -0.6
DDX1-204ENST00000459706 TULP1O00294 542 aaPredicted RBP11.3□□□□□ -0.6
DDX1-204ENST00000459706 PPP1R37O75864 691 aa11.3□□□□□ -0.6
DDX1-204ENST00000459706 KCNV2Q8TDN2 545 aa11.3□□□□□ -0.6
DDX1-204ENST00000459706 C19orf67A6NJJ6 358 aa11.29□□□□□ -0.6
DDX1-204ENST00000459706 PDE4AP27815 886 aa11.29□□□□□ -0.6
DDX1-204ENST00000459706 PHF12Q96QT6 1004 aa11.29□□□□□ -0.6
DDX1-204ENST00000459706 E2F4Q16254 413 aa11.28□□□□□ -0.6
DDX1-204ENST00000459706 TMEM106CQ9BVX2 250 aa11.27□□□□□ -0.61
DDX1-204ENST00000459706 TIE1P35590 1138 aa11.26□□□□□ -0.61
DDX1-204ENST00000459706 MKRN3Q13064 507 aaKnown RBP11.26□□□□□ -0.61
DDX1-204ENST00000459706 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.22□□□□□ -0.61
DDX1-204ENST00000459706 MFSD10Q14728 455 aa11.21□□□□□ -0.61
DDX1-204ENST00000459706 MS4A3Q96HJ5 214 aa11.21□□□□□ -0.61
DDX1-204ENST00000459706 MS4A4AQ96JQ5 239 aa11.21□□□□□ -0.61
DDX1-204ENST00000459706 ARIH1Q9Y4X5 557 aaPredicted RBP11.21□□□□□ -0.61
DDX1-204ENST00000459706 ILDR1Q86SU0 546 aaPredicted RBP11.18□□□□□ -0.62
DDX1-204ENST00000459706 CRISPLD2Q9H0B8 497 aa11.18□□□□□ -0.62
DDX1-204ENST00000459706 LMOD2Q6P5Q4 547 aa11.17□□□□□ -0.62
DDX1-204ENST00000459706 LARP6Q9BRS8 491 aaKnown RBP11.17□□□□□ -0.62
DDX1-204ENST00000459706 NCKAP5LQ9HCH0 1330 aa11.16□□□□□ -0.62
DDX1-204ENST00000459706 SMYD5Q6GMV2 418 aa11.16□□□□□ -0.62
DDX1-204ENST00000459706 DDX27Q96GQ7 796 aaKnown RBP11.15□□□□□ -0.62
DDX1-204ENST00000459706 TTLL13PA6NNM8 815 aa11.14□□□□□ -0.63
DDX1-204ENST00000459706 TESPA1A2RU30 521 aaPredicted RBP11.12□□□□□ -0.63
DDX1-204ENST00000459706 CAMK2BQ13554 666 aa11.12□□□□□ -0.63
DDX1-204ENST00000459706 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.11□□□□□ -0.632e-7■■□□□ 11.6
DDX1-204ENST00000459706 TRPC6Q9Y210 931 aa11.11□□□□□ -0.63
DDX1-204ENST00000459706 GPHNQ9NQX3 736 aaPredicted RBP11.08□□□□□ -0.64
DDX1-204ENST00000459706 BMP2KQ9NSY1 1161 aaPredicted RBP11.08□□□□□ -0.64
DDX1-204ENST00000459706 TRIM35Q9UPQ4 493 aa11.06□□□□□ -0.64
DDX1-204ENST00000459706 SEMA3EO15041 775 aa11.04□□□□□ -0.64
DDX1-204ENST00000459706 IER5LQ5T953 404 aa11.04□□□□□ -0.64
DDX1-204ENST00000459706 TMEM132AQ24JP5 1023 aa11.02□□□□□ -0.65
DDX1-204ENST00000459706 HAX1O00165 279 aa11.01□□□□□ -0.65
DDX1-204ENST00000459706 PPP1R15BQ5SWA1 713 aa11.01□□□□□ -0.65
DDX1-204ENST00000459706 GALR2O43603 387 aaPredicted RBP11□□□□□ -0.65
DDX1-204ENST00000459706 ERICH6Q7L0X2 663 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms