RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 PPM1GO15355 546 aaPredicted RBP21.45■■□□□ 1.02
HDAC7-217ENST00000459625 KCNH8Q96L42 1107 aa21.43■■□□□ 1.02
HDAC7-217ENST00000459625 IRX6P78412 446 aaPredicted RBP21.42■■□□□ 1.02
HDAC7-217ENST00000459625 CCDC136Q96JN2 1154 aa21.38■■□□□ 1.01
HDAC7-217ENST00000459625 HIRIP3Q9BW71 556 aaPredicted RBP21.35■■□□□ 1.01
HDAC7-217ENST00000459625 CLSTN1O94985 981 aa21.33■■□□□ 1.01
HDAC7-217ENST00000459625 NCLP19338 710 aaKnown RBP21.32■■□□□ 1
HDAC7-217ENST00000459625 LAS1LQ9Y4W2 734 aaKnown RBP21.32■■□□□ 1
HDAC7-217ENST00000459625 TSPY4P0CV99 314 aa21.25■□□□□ 0.99
HDAC7-217ENST00000459625 TSPY10P0CW01 314 aa21.25■□□□□ 0.99
HDAC7-217ENST00000459625 TRHP20396 242 aaPredicted RBP21.24■□□□□ 0.99
HDAC7-217ENST00000459625 RGL3Q3MIN7 710 aa21.24■□□□□ 0.99
HDAC7-217ENST00000459625 ZRSR1Q15695 479 aaKnown RBP21.24■□□□□ 0.99
HDAC7-217ENST00000459625 CHMP7Q8WUX9 453 aaPredicted RBP21.24■□□□□ 0.99
HDAC7-217ENST00000459625 MRS2Q9HD23 443 aa21.22■□□□□ 0.99
HDAC7-217ENST00000459625 ISY1Q9ULR0 285 aaKnown RBP21.21■□□□□ 0.99
HDAC7-217ENST00000459625 NAP1L2Q9ULW6 460 aaPredicted RBP21.21■□□□□ 0.99
HDAC7-217ENST00000459625 CSRNP3Q8WYN3 585 aa21.19■□□□□ 0.98
HDAC7-217ENST00000459625 NEUROD2Q15784 382 aa21.17■□□□□ 0.98
HDAC7-217ENST00000459625 AMER1Q5JTC6 1135 aaPredicted RBP21.17■□□□□ 0.98
HDAC7-217ENST00000459625 SOX12O15370 315 aa21.16■□□□□ 0.98
HDAC7-217ENST00000459625 GOLGA2Q08379 1002 aa21.15■□□□□ 0.98
HDAC7-217ENST00000459625 GLIPR1L2Q4G1C9 344 aa21.13■□□□□ 0.97
HDAC7-217ENST00000459625 ACIN1Q9UKV3 1341 aaKnown RBP21.13■□□□□ 0.97
HDAC7-217ENST00000459625 TNNT2P45379 298 aaPredicted RBP21.12■□□□□ 0.97
HDAC7-217ENST00000459625 PTMAP06454 111 aaKnown RBP21.12■□□□□ 0.97
HDAC7-217ENST00000459625 PLCB2Q00722 1185 aa21.12■□□□□ 0.97
HDAC7-217ENST00000459625 RRP7BPQ9NSQ0 103 aa21.11■□□□□ 0.97
HDAC7-217ENST00000459625 OS9Q13438 667 aaPredicted RBP21.09■□□□□ 0.97
HDAC7-217ENST00000459625 MLECQ14165 292 aa21.07■□□□□ 0.96
HDAC7-217ENST00000459625 DNTTIP2Q5QJE6 756 aaKnown RBP21.07■□□□□ 0.96
HDAC7-217ENST00000459625 TRIM44Q96DX7 344 aaPredicted RBP21.06■□□□□ 0.96
HDAC7-217ENST00000459625 FGD1P98174 961 aa21.04■□□□□ 0.96
HDAC7-217ENST00000459625 FTSJ3Q8IY81 847 aaKnown RBP21.02■□□□□ 0.96
HDAC7-217ENST00000459625 CASC1Q6TDU7 716 aa21.01■□□□□ 0.95
HDAC7-217ENST00000459625 PRM3Q9NNZ6 103 aa21■□□□□ 0.95
HDAC7-217ENST00000459625 POGKQ9P215 609 aa21■□□□□ 0.95
HDAC7-217ENST00000459625 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.99■□□□□ 0.95
HDAC7-217ENST00000459625 GOLGA6L22H0YM25 854 aa20.97■□□□□ 0.95
HDAC7-217ENST00000459625 CFAP53Q96M91 514 aa20.97■□□□□ 0.95
HDAC7-217ENST00000459625 BECN1Q14457 450 aa20.96■□□□□ 0.95
HDAC7-217ENST00000459625 KCNJ4P48050 445 aa20.96■□□□□ 0.95
HDAC7-217ENST00000459625 MTUS2Q5JR59 1369 aa20.95■□□□□ 0.94
HDAC7-217ENST00000459625 ZNF330Q9Y3S2 320 aaPredicted RBP20.95■□□□□ 0.94
HDAC7-217ENST00000459625 FRAT1Q92837 279 aaPredicted RBP20.92■□□□□ 0.94
HDAC7-217ENST00000459625 MAPK8IP3Q9UPT6 1336 aa20.92■□□□□ 0.94
HDAC7-217ENST00000459625 U2SURPO15042 1029 aaKnown RBP20.9■□□□□ 0.94
HDAC7-217ENST00000459625 CCDC9Q9Y3X0 531 aaKnown RBP20.9■□□□□ 0.94
HDAC7-217ENST00000459625 PDE4CQ08493 712 aa20.89■□□□□ 0.93
HDAC7-217ENST00000459625 ANO8Q9HCE9 1232 aaPredicted RBP20.89■□□□□ 0.93
HDAC7-217ENST00000459625 KNSTRNQ9Y448 316 aa20.88■□□□□ 0.93
HDAC7-217ENST00000459625 SAFB2Q14151 953 aaKnown RBP eCLIP20.86■□□□□ 0.93
HDAC7-217ENST00000459625 PLEKHD1A6NEE1 506 aa20.83■□□□□ 0.92
HDAC7-217ENST00000459625 RGS3P49796 1198 aa20.83■□□□□ 0.92
HDAC7-217ENST00000459625 EIF4G2P78344 907 aaKnown RBP eCLIP20.82■□□□□ 0.923e-7■■■■□ 21.1
HDAC7-217ENST00000459625 CC2D1BQ5T0F9 858 aaKnown RBP20.81■□□□□ 0.92
HDAC7-217ENST00000459625 ERICH6BQ5W0A0 696 aa20.79■□□□□ 0.92
HDAC7-217ENST00000459625 PAK3O75914 559 aaPredicted RBP20.78■□□□□ 0.92
HDAC7-217ENST00000459625 DDRGK1Q96HY6 314 aa20.78■□□□□ 0.92
HDAC7-217ENST00000459625 APBB1O00213 710 aa20.76■□□□□ 0.91
HDAC7-217ENST00000459625 HSP90AB1P08238 724 aaKnown RBP20.75■□□□□ 0.91
HDAC7-217ENST00000459625 SPRYD3Q8NCJ5 442 aa20.75■□□□□ 0.91
HDAC7-217ENST00000459625 NUDCQ9Y266 331 aa20.74■□□□□ 0.91
HDAC7-217ENST00000459625 CSB-PGBD3P0DP91 1061 aa20.73■□□□□ 0.91
HDAC7-217ENST00000459625 RTN4Q9NQC3 1192 aaKnown RBP20.73■□□□□ 0.91
HDAC7-217ENST00000459625 CARD11Q9BXL7 1154 aa20.73■□□□□ 0.91
HDAC7-217ENST00000459625 SCRIBQ14160 1630 aa20.73■□□□□ 0.91
HDAC7-217ENST00000459625 GOLGA6L6A8MZA4 724 aa20.72■□□□□ 0.91
HDAC7-217ENST00000459625 GNL2Q13823 731 aaKnown RBP20.72■□□□□ 0.91
HDAC7-217ENST00000459625 GOLGA6L4A6NEF3 574 aa20.7■□□□□ 0.9
HDAC7-217ENST00000459625 NAP1L5Q96NT1 182 aaPredicted RBP20.7■□□□□ 0.9
HDAC7-217ENST00000459625 TMX4Q9H1E5 349 aaPredicted RBP20.69■□□□□ 0.9
HDAC7-217ENST00000459625 STK26Q9P289 416 aa20.69■□□□□ 0.9
HDAC7-217ENST00000459625 SRPK2P78362 688 aaKnown RBP20.68■□□□□ 0.9
HDAC7-217ENST00000459625 G3V3G9 751 aa20.67■□□□□ 0.9
HDAC7-217ENST00000459625 DCAF8Q5TAQ9 597 aa20.67■□□□□ 0.9
HDAC7-217ENST00000459625 MIER1Q8N108 512 aa20.66■□□□□ 0.9
HDAC7-217ENST00000459625 DRC7Q8IY82 874 aa20.66■□□□□ 0.9
HDAC7-217ENST00000459625 CFDP1Q9UEE9 299 aaPredicted RBP20.65■□□□□ 0.9
HDAC7-217ENST00000459625 CDCA8Q53HL2 280 aa20.63■□□□□ 0.89
HDAC7-217ENST00000459625 FBXO3Q9UK99 471 aa20.62■□□□□ 0.89
HDAC7-217ENST00000459625 CHMP3Q9Y3E7 222 aa20.61■□□□□ 0.89
HDAC7-217ENST00000459625 PNNQ9H307 717 aaKnown RBP20.6■□□□□ 0.89
HDAC7-217ENST00000459625 SUPT16HQ9Y5B9 1047 aaKnown RBP20.6■□□□□ 0.89
HDAC7-217ENST00000459625 RTF1Q92541 710 aaKnown RBP20.59■□□□□ 0.89
HDAC7-217ENST00000459625 ANP32EQ9BTT0 268 aa20.58■□□□□ 0.89
HDAC7-217ENST00000459625 NOC3LQ8WTT2 800 aaKnown RBP20.58■□□□□ 0.88
HDAC7-217ENST00000459625 WWC1Q8IX03 1113 aa20.57■□□□□ 0.88
HDAC7-217ENST00000459625 KRI1Q8N9T8 703 aaKnown RBP20.56■□□□□ 0.88
HDAC7-217ENST00000459625 VPS53Q5VIR6 699 aa20.54■□□□□ 0.88
HDAC7-217ENST00000459625 NRDCO43847 1150 aa20.54■□□□□ 0.88
HDAC7-217ENST00000459625 CREBRFQ8IUR6 639 aa20.53■□□□□ 0.88
HDAC7-217ENST00000459625 MSH5O43196 834 aa20.53■□□□□ 0.88
HDAC7-217ENST00000459625 GGT6Q6P531 493 aa20.52■□□□□ 0.88
HDAC7-217ENST00000459625 KIAA2012Q0VF49 1180 aa20.52■□□□□ 0.88
HDAC7-217ENST00000459625 ARID3AQ99856 593 aa20.51■□□□□ 0.87
HDAC7-217ENST00000459625 ERCC6Q03468 1493 aa20.5■□□□□ 0.87
HDAC7-217ENST00000459625 GORABQ5T7V8 394 aa20.49■□□□□ 0.87
HDAC7-217ENST00000459625 TAF7LQ5H9L4 462 aa20.49■□□□□ 0.87
HDAC7-217ENST00000459625 HSP90B1P14625 803 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms