RNA–Protein interactions for RNA: ENST00000458992.1

RNU1-98P-201, Transcript of RNA, U1 small nuclear 98, pseudogene, humanhuman

BASIC

Gene RNU1-98P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-98P-201ENST00000458992 NPM1P06748 294 aaKnown RBP eCLIP4.83□□□□□ -1.64
RNU1-98P-201ENST00000458992 POTEJP0CG39 1038 aa4.83□□□□□ -1.64
RNU1-98P-201ENST00000458992 LCE2DQ5TA82 110 aaPredicted RBP4.83□□□□□ -1.64
RNU1-98P-201ENST00000458992 ATMINO43313 823 aaPredicted RBP4.81□□□□□ -1.64
RNU1-98P-201ENST00000458992 CDAN1Q8IWY9 1227 aa4.81□□□□□ -1.64
RNU1-98P-201ENST00000458992 PHF12Q96QT6 1004 aa4.81□□□□□ -1.64
RNU1-98P-201ENST00000458992 MS4A3Q96HJ5 214 aa4.75□□□□□ -1.65
RNU1-98P-201ENST00000458992 MNX1P50219 401 aaPredicted RBP4.72□□□□□ -1.65
RNU1-98P-201ENST00000458992 ATN1P54259 1190 aaPredicted RBP4.72□□□□□ -1.65
RNU1-98P-201ENST00000458992 MMRN1Q13201 1228 aa4.71□□□□□ -1.66
RNU1-98P-201ENST00000458992 POTEFA5A3E0 1075 aa4.7□□□□□ -1.66
RNU1-98P-201ENST00000458992 SEC24BO95487 1268 aa4.69□□□□□ -1.66
RNU1-98P-201ENST00000458992 SPNS2Q8IVW8 549 aa4.69□□□□□ -1.66
RNU1-98P-201ENST00000458992 TIE1P35590 1138 aa4.68□□□□□ -1.66
RNU1-98P-201ENST00000458992 ST18O60284 1047 aa4.67□□□□□ -1.66
RNU1-98P-201ENST00000458992 KIF12Q96FN5 646 aa4.67□□□□□ -1.66
RNU1-98P-201ENST00000458992 TMEM121BQ9BXQ6 578 aaPredicted RBP4.66□□□□□ -1.66
RNU1-98P-201ENST00000458992 BMP2KQ9NSY1 1161 aaPredicted RBP4.66□□□□□ -1.66
RNU1-98P-201ENST00000458992 IER5LQ5T953 404 aa4.65□□□□□ -1.67
RNU1-98P-201ENST00000458992 SLAIN1Q8ND83 568 aa4.65□□□□□ -1.67
RNU1-98P-201ENST00000458992 TSPYL2Q9H2G4 693 aaPredicted RBP4.65□□□□□ -1.67
RNU1-98P-201ENST00000458992 CCDC61Q9Y6R9 512 aa4.65□□□□□ -1.67
RNU1-98P-201ENST00000458992 SNPHO15079 494 aa4.63□□□□□ -1.67
RNU1-98P-201ENST00000458992 COLQQ9Y215 455 aaPredicted RBP4.63□□□□□ -1.67
RNU1-98P-201ENST00000458992 SPDYE4A6NLX3 237 aa4.62□□□□□ -1.67
RNU1-98P-201ENST00000458992 TTLL13PA6NNM8 815 aa4.6□□□□□ -1.67
RNU1-98P-201ENST00000458992 MAP3K13O43283 966 aa4.6□□□□□ -1.67
RNU1-98P-201ENST00000458992 SGIP1Q9BQI5 828 aa4.6□□□□□ -1.67
RNU1-98P-201ENST00000458992 TRPC6Q9Y210 931 aa4.59□□□□□ -1.67
RNU1-98P-201ENST00000458992 TRIM35Q9UPQ4 493 aa4.57□□□□□ -1.68
RNU1-98P-201ENST00000458992 PLCG2P16885 1265 aa4.56□□□□□ -1.68
RNU1-98P-201ENST00000458992 PLEKHG5O94827 1062 aa4.55□□□□□ -1.68
RNU1-98P-201ENST00000458992 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.53□□□□□ -1.68
RNU1-98P-201ENST00000458992 MARVELD3Q96A59 401 aa4.52□□□□□ -1.69
RNU1-98P-201ENST00000458992 OCEL1Q9H607 264 aa4.52□□□□□ -1.69
RNU1-98P-201ENST00000458992 IRX5P78411 483 aaPredicted RBP4.51□□□□□ -1.69
RNU1-98P-201ENST00000458992 PCDHB13Q9Y5F0 798 aa4.51□□□□□ -1.69
RNU1-98P-201ENST00000458992 EMP3P54852 163 aa4.49□□□□□ -1.69
RNU1-98P-201ENST00000458992 RASEFQ8IZ41 740 aa4.49□□□□□ -1.69
RNU1-98P-201ENST00000458992 MIER1Q8N108 512 aa4.49□□□□□ -1.69
RNU1-98P-201ENST00000458992 TMEM106CQ9BVX2 250 aa4.49□□□□□ -1.69
RNU1-98P-201ENST00000458992 KRTAP3-3Q9BYR6 98 aa4.48□□□□□ -1.69
RNU1-98P-201ENST00000458992 KRTAP3-2Q9BYR7 98 aa4.48□□□□□ -1.69
RNU1-98P-201ENST00000458992 HS3ST6Q96QI5 342 aa4.47□□□□□ -1.69
RNU1-98P-201ENST00000458992 FAM205CA6NFA0 338 aa4.46□□□□□ -1.7
RNU1-98P-201ENST00000458992 IFNL1Q8IU54 200 aa4.46□□□□□ -1.7
RNU1-98P-201ENST00000458992 PROM2Q8N271 834 aa4.45□□□□□ -1.7
RNU1-98P-201ENST00000458992 L3MBTL3Q96JM7 780 aaPredicted RBP4.45□□□□□ -1.7
RNU1-98P-201ENST00000458992 POTEB3A0JP26 581 aa4.44□□□□□ -1.7
RNU1-98P-201ENST00000458992 POTEBQ6S5H4 581 aa4.44□□□□□ -1.7
RNU1-98P-201ENST00000458992 ZBTB47Q9UFB7 747 aaPredicted RBP4.44□□□□□ -1.7
RNU1-98P-201ENST00000458992 C3orf67Q6ZVT6 689 aa4.42□□□□□ -1.7
RNU1-98P-201ENST00000458992 RNF166Q96A37 237 aaPredicted RBP4.42□□□□□ -1.7
RNU1-98P-201ENST00000458992 NUBP1P53384 320 aa4.4□□□□□ -1.71
RNU1-98P-201ENST00000458992 PLCD3Q8N3E9 789 aa4.39□□□□□ -1.71
RNU1-98P-201ENST00000458992 FAM212AQ96EL1 285 aa4.39□□□□□ -1.71
RNU1-98P-201ENST00000458992 CSRNP3Q8WYN3 585 aa4.38□□□□□ -1.71
RNU1-98P-201ENST00000458992 MYT1LQ9UL68 1186 aa4.38□□□□□ -1.71
RNU1-98P-201ENST00000458992 PTGER2P43116 358 aa4.37□□□□□ -1.71
RNU1-98P-201ENST00000458992 HOXB1P14653 301 aaPredicted RBP4.36□□□□□ -1.71
RNU1-98P-201ENST00000458992 MKRN3Q13064 507 aaKnown RBP4.36□□□□□ -1.71
RNU1-98P-201ENST00000458992 ERBB3P21860 1342 aa4.36□□□□□ -1.71
RNU1-98P-201ENST00000458992 GOLGA2Q08379 1002 aa4.35□□□□□ -1.71
RNU1-98P-201ENST00000458992 ZNF710Q8N1W2 664 aa4.35□□□□□ -1.71
RNU1-98P-201ENST00000458992 PDCD7Q8N8D1 485 aaKnown RBP4.35□□□□□ -1.71
RNU1-98P-201ENST00000458992 HOXB3P14651 431 aaPredicted RBP4.32□□□□□ -1.72
RNU1-98P-201ENST00000458992 DOK7Q18PE1 504 aa4.32□□□□□ -1.72
RNU1-98P-201ENST00000458992 DCAF8Q5TAQ9 597 aa4.32□□□□□ -1.72
RNU1-98P-201ENST00000458992 ZNF687Q8N1G0 1237 aa4.32□□□□□ -1.72
RNU1-98P-201ENST00000458992 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.32□□□□□ -1.72
RNU1-98P-201ENST00000458992 G3V3G9 751 aa4.31□□□□□ -1.72
RNU1-98P-201ENST00000458992 RIMBP2O15034 1052 aa4.31□□□□□ -1.72
RNU1-98P-201ENST00000458992 PCDHB8Q9UN66 801 aa4.31□□□□□ -1.72
RNU1-98P-201ENST00000458992 PYGBP11216 843 aa4.3□□□□□ -1.72
RNU1-98P-201ENST00000458992 VARS2Q5ST30 1063 aaKnown RBP4.29□□□□□ -1.72
RNU1-98P-201ENST00000458992 ZNF467Q7Z7K2 595 aaPredicted RBP4.29□□□□□ -1.72
RNU1-98P-201ENST00000458992 ILDR1Q86SU0 546 aaPredicted RBP4.29□□□□□ -1.72
RNU1-98P-201ENST00000458992 ZSWIM6Q9HCJ5 1215 aa4.28□□□□□ -1.72
RNU1-98P-201ENST00000458992 BOLA1Q9Y3E2 137 aa4.27□□□□□ -1.73
RNU1-98P-201ENST00000458992 PLA2G2EQ9NZK7 142 aa4.26□□□□□ -1.73
RNU1-98P-201ENST00000458992 CHRM1P11229 460 aaPredicted RBP4.25□□□□□ -1.73
RNU1-98P-201ENST00000458992 ANKRD13DQ6ZTN6 518 aa4.25□□□□□ -1.73
RNU1-98P-201ENST00000458992 GSE1Q14687 1217 aa4.24□□□□□ -1.73
RNU1-98P-201ENST00000458992 DPY19L2Q6NUT2 758 aa4.24□□□□□ -1.73
RNU1-98P-201ENST00000458992 HCSTQ9UBK5 93 aa4.24□□□□□ -1.73
RNU1-98P-201ENST00000458992 PSEN1P49768 467 aa4.23□□□□□ -1.73
RNU1-98P-201ENST00000458992 GPR153Q6NV75 609 aa4.21□□□□□ -1.74
RNU1-98P-201ENST00000458992 RGS20O76081 388 aa4.2□□□□□ -1.74
RNU1-98P-201ENST00000458992 LSM11P83369 360 aaKnown RBP eCLIP4.2□□□□□ -1.74
RNU1-98P-201ENST00000458992 PDAP1Q13442 181 aaKnown RBP4.2□□□□□ -1.74
RNU1-98P-201ENST00000458992 PBX2P40425 430 aa4.18□□□□□ -1.74
RNU1-98P-201ENST00000458992 ZNF316A6NFI3 1004 aaPredicted RBP4.17□□□□□ -1.74
RNU1-98P-201ENST00000458992 CABP2Q9NPB3 220 aa4.16□□□□□ -1.74
RNU1-98P-201ENST00000458992 ARSIQ5FYB1 569 aa4.15□□□□□ -1.75
RNU1-98P-201ENST00000458992 IRX2Q9BZI1 471 aaPredicted RBP4.15□□□□□ -1.75
RNU1-98P-201ENST00000458992 FBXO3Q9UK99 471 aa4.13□□□□□ -1.75
RNU1-98P-201ENST00000458992 KLHL34Q8N239 644 aa4.12□□□□□ -1.75
RNU1-98P-201ENST00000458992 IFFO2Q5TF58 517 aa4.11□□□□□ -1.75
RNU1-98P-201ENST00000458992 TMEM92Q6UXU6 159 aa4.11□□□□□ -1.75
RNU1-98P-201ENST00000458992 MICALL2Q8IY33 904 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms