RNA–Protein interactions for RNA: ENST00000458638.1

PCDH15-220, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 448 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-220ENST00000458638 PHF12Q96QT6 1004 aa8.1□□□□□ -1.11
PCDH15-220ENST00000458638 CLCN6P51797 869 aa8.08□□□□□ -1.12
PCDH15-220ENST00000458638 SPOCK2Q92563 424 aa8.08□□□□□ -1.12
PCDH15-220ENST00000458638 FAM212AQ96EL1 285 aa8.08□□□□□ -1.12
PCDH15-220ENST00000458638 KIF12Q96FN5 646 aa8.04□□□□□ -1.12
PCDH15-220ENST00000458638 GALR2O43603 387 aaPredicted RBP8.03□□□□□ -1.12
PCDH15-220ENST00000458638 DCAF8Q5TAQ9 597 aa8.02□□□□□ -1.13
PCDH15-220ENST00000458638 GSE1Q14687 1217 aa8.01□□□□□ -1.13
PCDH15-220ENST00000458638 MS4A3Q96HJ5 214 aa8.01□□□□□ -1.13
PCDH15-220ENST00000458638 MAP3K13O43283 966 aa8□□□□□ -1.13
PCDH15-220ENST00000458638 POTEIP0CG38 1075 aa7.97□□□□□ -1.13
PCDH15-220ENST00000458638 PYGBP11216 843 aa7.97□□□□□ -1.13
PCDH15-220ENST00000458638 SGIP1Q9BQI5 828 aa7.97□□□□□ -1.13
PCDH15-220ENST00000458638 CHRM1P11229 460 aaPredicted RBP7.95□□□□□ -1.14
PCDH15-220ENST00000458638 CIZ1Q9ULV3 898 aaPredicted RBP7.95□□□□□ -1.14
PCDH15-220ENST00000458638 TRPC6Q9Y210 931 aa7.94□□□□□ -1.14
PCDH15-220ENST00000458638 PCDHB13Q9Y5F0 798 aa7.94□□□□□ -1.14
PCDH15-220ENST00000458638 IFNL1Q8IU54 200 aa7.93□□□□□ -1.14
PCDH15-220ENST00000458638 DCBLD2Q96PD2 775 aa7.92□□□□□ -1.14
PCDH15-220ENST00000458638 ASTLQ6HA08 431 aaPredicted RBP7.91□□□□□ -1.14
PCDH15-220ENST00000458638 TRIM41Q8WV44 630 aa7.9□□□□□ -1.14
PCDH15-220ENST00000458638 ATMINO43313 823 aaPredicted RBP7.89□□□□□ -1.15
PCDH15-220ENST00000458638 BMP2KQ9NSY1 1161 aaPredicted RBP7.89□□□□□ -1.15
PCDH15-220ENST00000458638 TIE1P35590 1138 aa7.88□□□□□ -1.15
PCDH15-220ENST00000458638 PCDHB8Q9UN66 801 aa7.88□□□□□ -1.15
PCDH15-220ENST00000458638 PKD2Q13563 968 aa7.86□□□□□ -1.15
PCDH15-220ENST00000458638 ZNF467Q7Z7K2 595 aaPredicted RBP7.86□□□□□ -1.15
PCDH15-220ENST00000458638 PELP1Q8IZL8 1130 aaKnown RBP7.86□□□□□ -1.15
PCDH15-220ENST00000458638 TTLL13PA6NNM8 815 aa7.85□□□□□ -1.15
PCDH15-220ENST00000458638 ATN1P54259 1190 aaPredicted RBP7.85□□□□□ -1.15
PCDH15-220ENST00000458638 RNF25Q96BH1 459 aaPredicted RBP7.83□□□□□ -1.16
PCDH15-220ENST00000458638 TMEM106CQ9BVX2 250 aa7.82□□□□□ -1.16
PCDH15-220ENST00000458638 ECM2O94769 699 aaPredicted RBP7.79□□□□□ -1.16
PCDH15-220ENST00000458638 PSEN1P49768 467 aa7.79□□□□□ -1.16
PCDH15-220ENST00000458638 PDAP1Q13442 181 aaKnown RBP7.79□□□□□ -1.16
PCDH15-220ENST00000458638 TRIM35Q9UPQ4 493 aa7.79□□□□□ -1.16
PCDH15-220ENST00000458638 RIOK3O14730 519 aaKnown RBP7.78□□□□□ -1.16
PCDH15-220ENST00000458638 SLC39A7Q92504 469 aa7.78□□□□□ -1.16
PCDH15-220ENST00000458638 METRNQ9UJH8 293 aa7.77□□□□□ -1.17
PCDH15-220ENST00000458638 C7P10643 843 aa7.76□□□□□ -1.17
PCDH15-220ENST00000458638 RGL2O15211 777 aa7.75□□□□□ -1.17
PCDH15-220ENST00000458638 POTEFA5A3E0 1075 aa7.74□□□□□ -1.17
PCDH15-220ENST00000458638 IER5LQ5T953 404 aa7.74□□□□□ -1.17
PCDH15-220ENST00000458638 VGFO15240 615 aaPredicted RBP7.73□□□□□ -1.17
PCDH15-220ENST00000458638 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.71□□□□□ -1.18
PCDH15-220ENST00000458638 POTEB2H3BUK9 544 aa7.71□□□□□ -1.18
PCDH15-220ENST00000458638 LHX8Q68G74 356 aa7.71□□□□□ -1.18
PCDH15-220ENST00000458638 ZFP91Q96JP5 570 aaPredicted RBP7.71□□□□□ -1.18
PCDH15-220ENST00000458638 COLQQ9Y215 455 aaPredicted RBP7.71□□□□□ -1.18
PCDH15-220ENST00000458638 IRX5P78411 483 aaPredicted RBP7.7□□□□□ -1.18
PCDH15-220ENST00000458638 CABP2Q9NPB3 220 aa7.68□□□□□ -1.18
PCDH15-220ENST00000458638 ILDR1Q86SU0 546 aaPredicted RBP7.67□□□□□ -1.18
PCDH15-220ENST00000458638 TAOK2Q9UL54 1235 aa7.67□□□□□ -1.18
PCDH15-220ENST00000458638 POTEJP0CG39 1038 aa7.66□□□□□ -1.18
PCDH15-220ENST00000458638 MKRN3Q13064 507 aaKnown RBP7.66□□□□□ -1.18
PCDH15-220ENST00000458638 SEC24BO95487 1268 aa7.65□□□□□ -1.18
PCDH15-220ENST00000458638 GOLGA2Q08379 1002 aa7.65□□□□□ -1.18
PCDH15-220ENST00000458638 AMER1Q5JTC6 1135 aaPredicted RBP7.65□□□□□ -1.18
PCDH15-220ENST00000458638 PDCD7Q8N8D1 485 aaKnown RBP7.65□□□□□ -1.18
PCDH15-220ENST00000458638 BCL11BQ9C0K0 894 aaPredicted RBP7.65□□□□□ -1.18
PCDH15-220ENST00000458638 OCEL1Q9H607 264 aa7.65□□□□□ -1.18
PCDH15-220ENST00000458638 PLCG2P16885 1265 aa7.64□□□□□ -1.19
PCDH15-220ENST00000458638 EFCAB3Q8N7B9 438 aa7.64□□□□□ -1.19
PCDH15-220ENST00000458638 STK25O00506 426 aa7.63□□□□□ -1.19
PCDH15-220ENST00000458638 RTN4Q9NQC3 1192 aaKnown RBP7.62□□□□□ -1.19
PCDH15-220ENST00000458638 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.62□□□□□ -1.19
PCDH15-220ENST00000458638 STK24Q9Y6E0 443 aa7.62□□□□□ -1.19
PCDH15-220ENST00000458638 OTUD5Q96G74 571 aa7.61□□□□□ -1.19
PCDH15-220ENST00000458638 HS6ST3Q8IZP7 471 aa7.6□□□□□ -1.19
PCDH15-220ENST00000458638 SOX12O15370 315 aa7.58□□□□□ -1.2
PCDH15-220ENST00000458638 DPY19L2Q6NUT2 758 aa7.57□□□□□ -1.2
PCDH15-220ENST00000458638 MS4A4AQ96JQ5 239 aa7.57□□□□□ -1.2
PCDH15-220ENST00000458638 PHF8Q9UPP1 1060 aa7.57□□□□□ -1.2
PCDH15-220ENST00000458638 MAMSTRQ6ZN01 415 aa7.56□□□□□ -1.2
PCDH15-220ENST00000458638 FBXO22Q8NEZ5 403 aa7.56□□□□□ -1.2
PCDH15-220ENST00000458638 CHGAP10645 457 aaKnown RBP7.55□□□□□ -1.2
PCDH15-220ENST00000458638 MFRPQ9BY79 579 aa7.55□□□□□ -1.2
PCDH15-220ENST00000458638 DNAJC5Q9H3Z4 198 aa7.55□□□□□ -1.2
PCDH15-220ENST00000458638 SLC24A1O60721 1099 aa7.54□□□□□ -1.2
PCDH15-220ENST00000458638 SCUBE2Q9NQ36 999 aa7.54□□□□□ -1.2
PCDH15-220ENST00000458638 NLRP6P59044 892 aa7.52□□□□□ -1.21
PCDH15-220ENST00000458638 L3MBTL3Q96JM7 780 aaPredicted RBP7.52□□□□□ -1.21
PCDH15-220ENST00000458638 TMEM121BQ9BXQ6 578 aaPredicted RBP7.51□□□□□ -1.21
PCDH15-220ENST00000458638 BOLA1Q9Y3E2 137 aa7.51□□□□□ -1.21
PCDH15-220ENST00000458638 NKX1-1Q15270 411 aaPredicted RBP7.5□□□□□ -1.21
PCDH15-220ENST00000458638 DCAF8L2P0C7V8 631 aa7.48□□□□□ -1.21
PCDH15-220ENST00000458638 MICALL2Q8IY33 904 aa7.47□□□□□ -1.21
PCDH15-220ENST00000458638 C3orf67Q6ZVT6 689 aa7.46□□□□□ -1.22
PCDH15-220ENST00000458638 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.46□□□□□ -1.22
PCDH15-220ENST00000458638 SLAIN1Q8ND83 568 aa7.45□□□□□ -1.22
PCDH15-220ENST00000458638 PPP1R37O75864 691 aa7.44□□□□□ -1.22
PCDH15-220ENST00000458638 G3V3G9 751 aa7.43□□□□□ -1.22
PCDH15-220ENST00000458638 TMEM92Q6UXU6 159 aa7.41□□□□□ -1.22
PCDH15-220ENST00000458638 GTPBP6O43824 516 aaPredicted RBP7.4□□□□□ -1.22
PCDH15-220ENST00000458638 RYDENQ9NUL5 291 aaKnown RBP7.39□□□□□ -1.23
PCDH15-220ENST00000458638 BBXQ8WY36 941 aaPredicted RBP7.38□□□□□ -1.23
PCDH15-220ENST00000458638 LCE2DQ5TA82 110 aaPredicted RBP7.37□□□□□ -1.23
PCDH15-220ENST00000458638 KIF3CO14782 793 aa7.35□□□□□ -1.23
PCDH15-220ENST00000458638 SNPHO15079 494 aa7.32□□□□□ -1.24
PCDH15-220ENST00000458638 HOXB3P14651 431 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms