RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 NCLP19338 710 aaKnown RBP26.15■■□□□ 1.78
SNX27-204ENST00000458013 MYH16Q9H6N6 1097 aa26.11■■□□□ 1.77
SNX27-204ENST00000458013 RRP7BPQ9NSQ0 103 aa26.11■■□□□ 1.77
SNX27-204ENST00000458013 RTN4Q9NQC3 1192 aaKnown RBP26.1■■□□□ 1.77
SNX27-204ENST00000458013 NPM1P06748 294 aaKnown RBP eCLIP26.07■■□□□ 1.76
SNX27-204ENST00000458013 CDK11BP21127 795 aaKnown RBP26.05■■□□□ 1.76
SNX27-204ENST00000458013 PPM1GO15355 546 aaPredicted RBP26.01■■□□□ 1.75
SNX27-204ENST00000458013 RGL3Q3MIN7 710 aa26■■□□□ 1.75
SNX27-204ENST00000458013 LAS1LQ9Y4W2 734 aaKnown RBP25.97■■□□□ 1.75
SNX27-204ENST00000458013 TRIM44Q96DX7 344 aaPredicted RBP25.96■■□□□ 1.75
SNX27-204ENST00000458013 KCNH8Q96L42 1107 aa25.95■■□□□ 1.75
SNX27-204ENST00000458013 NEUROD2Q15784 382 aa25.94■■□□□ 1.74
SNX27-204ENST00000458013 SUPT16HQ9Y5B9 1047 aaKnown RBP25.9■■□□□ 1.74
SNX27-204ENST00000458013 TSPY4P0CV99 314 aa25.88■■□□□ 1.73
SNX27-204ENST00000458013 TSPY10P0CW01 314 aa25.88■■□□□ 1.73
SNX27-204ENST00000458013 PPP1R15AO75807 674 aaPredicted RBP25.88■■□□□ 1.73
SNX27-204ENST00000458013 PTMAP06454 111 aaKnown RBP25.88■■□□□ 1.73
SNX27-204ENST00000458013 BECN1Q14457 450 aa25.87■■□□□ 1.73
SNX27-204ENST00000458013 MTUS2Q5JR59 1369 aa25.86■■□□□ 1.73
SNX27-204ENST00000458013 TNNT2P45379 298 aaPredicted RBP25.85■■□□□ 1.73
SNX27-204ENST00000458013 EIF4G2P78344 907 aaKnown RBP eCLIP25.84■■□□□ 1.73
SNX27-204ENST00000458013 DNTTIP2Q5QJE6 756 aaKnown RBP25.84■■□□□ 1.73
SNX27-204ENST00000458013 DDRGK1Q96HY6 314 aa25.84■■□□□ 1.73
SNX27-204ENST00000458013 PLCB2Q00722 1185 aa25.81■■□□□ 1.72
SNX27-204ENST00000458013 DCAF1Q9Y4B6 1507 aa25.8■■□□□ 1.72
SNX27-204ENST00000458013 RGS3P49796 1198 aa25.79■■□□□ 1.72
SNX27-204ENST00000458013 HAP1P54257 671 aaPredicted RBP25.78■■□□□ 1.72
SNX27-204ENST00000458013 NAP1L5Q96NT1 182 aaPredicted RBP25.76■■□□□ 1.71
SNX27-204ENST00000458013 FTSJ3Q8IY81 847 aaKnown RBP25.76■■□□□ 1.71
SNX27-204ENST00000458013 CHMP7Q8WUX9 453 aaPredicted RBP25.74■■□□□ 1.71
SNX27-204ENST00000458013 FRAT1Q92837 279 aaPredicted RBP25.74■■□□□ 1.71
SNX27-204ENST00000458013 SPRYD3Q8NCJ5 442 aa25.73■■□□□ 1.71
SNX27-204ENST00000458013 CC2D1BQ5T0F9 858 aaKnown RBP25.72■■□□□ 1.71
SNX27-204ENST00000458013 GOLGA6L22H0YM25 854 aa25.72■■□□□ 1.71
SNX27-204ENST00000458013 LMOD2Q6P5Q4 547 aa25.69■■□□□ 1.7
SNX27-204ENST00000458013 ZRSR1Q15695 479 aaKnown RBP25.69■■□□□ 1.7
SNX27-204ENST00000458013 AMER1Q5JTC6 1135 aaPredicted RBP25.69■■□□□ 1.7
SNX27-204ENST00000458013 ARID4BQ4LE39 1312 aaPredicted RBP25.68■■□□□ 1.7
SNX27-204ENST00000458013 NAP1L2Q9ULW6 460 aaPredicted RBP25.66■■□□□ 1.7
SNX27-204ENST00000458013 CASC1Q6TDU7 716 aa25.65■■□□□ 1.7
SNX27-204ENST00000458013 MYO15BQ96JP2 1530 aa25.64■■□□□ 1.7
SNX27-204ENST00000458013 ANP32EQ9BTT0 268 aa25.63■■□□□ 1.69
SNX27-204ENST00000458013 KNSTRNQ9Y448 316 aa25.63■■□□□ 1.69
SNX27-204ENST00000458013 NCBP3Q53F19 620 aaKnown RBP25.61■■□□□ 1.69
SNX27-204ENST00000458013 SIN3AQ96ST3 1273 aa25.6■■□□□ 1.69
SNX27-204ENST00000458013 CLIP1P30622 1438 aa25.6■■□□□ 1.69
SNX27-204ENST00000458013 B4GALNT3Q6L9W6 998 aa25.59■■□□□ 1.69
SNX27-204ENST00000458013 CARD11Q9BXL7 1154 aa25.59■■□□□ 1.69
SNX27-204ENST00000458013 SOX12O15370 315 aa25.58■■□□□ 1.69
SNX27-204ENST00000458013 CFAP53Q96M91 514 aa25.57■■□□□ 1.68
SNX27-204ENST00000458013 ZCCHC6Q5VYS8 1495 aaKnown RBP25.57■■□□□ 1.68
SNX27-204ENST00000458013 HSP90AB1P08238 724 aaKnown RBP25.56■■□□□ 1.68
SNX27-204ENST00000458013 NPHP1O15259 732 aa25.55■■□□□ 1.68
SNX27-204ENST00000458013 OS9Q13438 667 aaPredicted RBP25.54■■□□□ 1.68
SNX27-204ENST00000458013 U2SURPO15042 1029 aaKnown RBP25.52■■□□□ 1.68
SNX27-204ENST00000458013 MAPK8IP3Q9UPT6 1336 aa25.52■■□□□ 1.68
SNX27-204ENST00000458013 NOP58Q9Y2X3 529 aaKnown RBP25.5■■□□□ 1.67
SNX27-204ENST00000458013 ARID3AQ99856 593 aa25.46■■□□□ 1.67
SNX27-204ENST00000458013 FGD1P98174 961 aa25.44■■□□□ 1.66
SNX27-204ENST00000458013 POGKQ9P215 609 aa25.43■■□□□ 1.66
SNX27-204ENST00000458013 KCNJ4P48050 445 aa25.41■■□□□ 1.66
SNX27-204ENST00000458013 CLSTN1O94985 981 aa25.41■■□□□ 1.66
SNX27-204ENST00000458013 SAFB2Q14151 953 aaKnown RBP eCLIP25.41■■□□□ 1.66
SNX27-204ENST00000458013 APBB1O00213 710 aa25.4■■□□□ 1.66
SNX27-204ENST00000458013 PLEKHD1A6NEE1 506 aa25.39■■□□□ 1.66
SNX27-204ENST00000458013 CEP162Q5TB80 1403 aa25.38■■□□□ 1.65
SNX27-204ENST00000458013 PPP4R2Q9NY27 417 aa25.37■■□□□ 1.65
SNX27-204ENST00000458013 CFDP1Q9UEE9 299 aaPredicted RBP25.36■■□□□ 1.65
SNX27-204ENST00000458013 ERICH6BQ5W0A0 696 aa25.3■■□□□ 1.64
SNX27-204ENST00000458013 GOLGA2Q08379 1002 aa25.29■■□□□ 1.64
SNX27-204ENST00000458013 MLECQ14165 292 aa25.29■■□□□ 1.64
SNX27-204ENST00000458013 ISY1Q9ULR0 285 aaKnown RBP25.29■■□□□ 1.64
SNX27-204ENST00000458013 DRC7Q8IY82 874 aa25.29■■□□□ 1.64
SNX27-204ENST00000458013 NUDCQ9Y266 331 aa25.28■■□□□ 1.64
SNX27-204ENST00000458013 DEKP35659 375 aaKnown RBP25.26■■□□□ 1.63
SNX27-204ENST00000458013 HSCBQ8IWL3 235 aa25.25■■□□□ 1.63
SNX27-204ENST00000458013 RSF1Q96T23 1441 aaPredicted RBP25.25■■□□□ 1.63
SNX27-204ENST00000458013 CDCA8Q53HL2 280 aa25.25■■□□□ 1.63
SNX27-204ENST00000458013 GOLGA3Q08378 1498 aa25.24■■□□□ 1.63
SNX27-204ENST00000458013 GOLGA6L6A8MZA4 724 aa25.24■■□□□ 1.63
SNX27-204ENST00000458013 GZF1Q9H116 711 aaPredicted RBP25.24■■□□□ 1.63
SNX27-204ENST00000458013 DCAF11Q8TEB1 546 aa25.23■■□□□ 1.63
SNX27-204ENST00000458013 GOLGA6L4A6NEF3 574 aa25.21■■□□□ 1.63
SNX27-204ENST00000458013 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.21■■□□□ 1.63
SNX27-204ENST00000458013 FOXD1Q16676 465 aa25.2■■□□□ 1.62
SNX27-204ENST00000458013 SRPK2P78362 688 aaKnown RBP25.17■■□□□ 1.62
SNX27-204ENST00000458013 STK26Q9P289 416 aa25.17■■□□□ 1.62
SNX27-204ENST00000458013 MSNP26038 577 aaKnown RBP25.16■■□□□ 1.62
SNX27-204ENST00000458013 ZNF330Q9Y3S2 320 aaPredicted RBP25.14■■□□□ 1.62
SNX27-204ENST00000458013 CCDC180Q9P1Z9 1646 aa25.11■■□□□ 1.61
SNX27-204ENST00000458013 EIF4G1Q04637 1599 aaKnown RBP25.11■■□□□ 1.61
SNX27-204ENST00000458013 PDE4CQ08493 712 aa25.1■■□□□ 1.61
SNX27-204ENST00000458013 FOXD4L1Q9NU39 408 aa25.1■■□□□ 1.61
SNX27-204ENST00000458013 MORC1Q86VD1 984 aa25.09■■□□□ 1.61
SNX27-204ENST00000458013 SLKQ9H2G2 1235 aaPredicted RBP25.09■■□□□ 1.61
SNX27-204ENST00000458013 GNL2Q13823 731 aaKnown RBP25.08■■□□□ 1.61
SNX27-204ENST00000458013 ANO8Q9HCE9 1232 aaPredicted RBP25.08■■□□□ 1.61
SNX27-204ENST00000458013 RBM19Q9Y4C8 960 aaKnown RBP25.07■■□□□ 1.6
SNX27-204ENST00000458013 TMF1P82094 1093 aa25.06■■□□□ 1.6
SNX27-204ENST00000458013 CHAF1AQ13111 956 aaPredicted RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms