RNA–Protein interactions for RNA: ENST00000456646.1

CFTRP1-201, Transcript of cystic fibrosis transmembrane conductance regulator pseudogene 1, humanhuman

BASIC

Gene CFTRP1, Length 183 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP1-201ENST00000456646 IFNLR1Q8IU57 520 aaPredicted RBP12.24□□□□□ -0.45
CFTRP1-201ENST00000456646 TSPYL2Q9H2G4 693 aaPredicted RBP12.22□□□□□ -0.45
CFTRP1-201ENST00000456646 CCDC61Q9Y6R9 512 aa12.22□□□□□ -0.45
CFTRP1-201ENST00000456646 KLHL34Q8N239 644 aa12.2□□□□□ -0.46
CFTRP1-201ENST00000456646 PHF12Q96QT6 1004 aa12.19□□□□□ -0.46
CFTRP1-201ENST00000456646 FAM212AQ96EL1 285 aa12.14□□□□□ -0.47
CFTRP1-201ENST00000456646 DCBLD2Q96PD2 775 aa12.14□□□□□ -0.47
CFTRP1-201ENST00000456646 GALR2O43603 387 aaPredicted RBP12.11□□□□□ -0.47
CFTRP1-201ENST00000456646 SPOCK2Q92563 424 aa12.11□□□□□ -0.47
CFTRP1-201ENST00000456646 KIF12Q96FN5 646 aa12.11□□□□□ -0.47
CFTRP1-201ENST00000456646 POTEMA6NI47 508 aa12.08□□□□□ -0.48
CFTRP1-201ENST00000456646 OTUD5Q96G74 571 aa12.08□□□□□ -0.48
CFTRP1-201ENST00000456646 DCAF8Q5TAQ9 597 aa12.07□□□□□ -0.48
CFTRP1-201ENST00000456646 GSE1Q14687 1217 aa12.05□□□□□ -0.48
CFTRP1-201ENST00000456646 MS4A3Q96HJ5 214 aa12.05□□□□□ -0.48
CFTRP1-201ENST00000456646 MAP3K13O43283 966 aa12.04□□□□□ -0.48
CFTRP1-201ENST00000456646 SGIP1Q9BQI5 828 aa12.03□□□□□ -0.48
CFTRP1-201ENST00000456646 PCDH10Q9P2E7 1040 aa12.03□□□□□ -0.48
CFTRP1-201ENST00000456646 POTEGQ6S5H5 508 aa12.01□□□□□ -0.49
CFTRP1-201ENST00000456646 CHRM1P11229 460 aaPredicted RBP11.97□□□□□ -0.49
CFTRP1-201ENST00000456646 PYGBP11216 843 aa11.96□□□□□ -0.49
CFTRP1-201ENST00000456646 PCDHB13Q9Y5F0 798 aa11.96□□□□□ -0.49
CFTRP1-201ENST00000456646 POTEB2H3BUK9 544 aa11.94□□□□□ -0.5
CFTRP1-201ENST00000456646 ASTLQ6HA08 431 aaPredicted RBP11.93□□□□□ -0.5
CFTRP1-201ENST00000456646 IFNL1Q8IU54 200 aa11.93□□□□□ -0.5
CFTRP1-201ENST00000456646 TRPC6Q9Y210 931 aa11.93□□□□□ -0.5
CFTRP1-201ENST00000456646 CIZ1Q9ULV3 898 aaPredicted RBP11.92□□□□□ -0.5
CFTRP1-201ENST00000456646 ATMINO43313 823 aaPredicted RBP11.89□□□□□ -0.51
CFTRP1-201ENST00000456646 TIE1P35590 1138 aa11.89□□□□□ -0.51
CFTRP1-201ENST00000456646 TRIM41Q8WV44 630 aa11.87□□□□□ -0.51
CFTRP1-201ENST00000456646 BMP2KQ9NSY1 1161 aaPredicted RBP11.87□□□□□ -0.51
CFTRP1-201ENST00000456646 PELP1Q8IZL8 1130 aaKnown RBP11.86□□□□□ -0.51
CFTRP1-201ENST00000456646 PCDHB8Q9UN66 801 aa11.84□□□□□ -0.51
CFTRP1-201ENST00000456646 ATN1P54259 1190 aaPredicted RBP11.83□□□□□ -0.52
CFTRP1-201ENST00000456646 ZNF467Q7Z7K2 595 aaPredicted RBP11.83□□□□□ -0.52
CFTRP1-201ENST00000456646 TTLL13PA6NNM8 815 aa11.82□□□□□ -0.52
CFTRP1-201ENST00000456646 SLC39A7Q92504 469 aa11.76□□□□□ -0.53
CFTRP1-201ENST00000456646 TMEM106CQ9BVX2 250 aa11.76□□□□□ -0.53
CFTRP1-201ENST00000456646 C7P10643 843 aa11.75□□□□□ -0.53
CFTRP1-201ENST00000456646 PKD2Q13563 968 aa11.74□□□□□ -0.53
CFTRP1-201ENST00000456646 TRIM35Q9UPQ4 493 aa11.73□□□□□ -0.53
CFTRP1-201ENST00000456646 METRNQ9UJH8 293 aa11.72□□□□□ -0.53
CFTRP1-201ENST00000456646 RNF25Q96BH1 459 aaPredicted RBP11.71□□□□□ -0.53
CFTRP1-201ENST00000456646 PSEN1P49768 467 aa11.7□□□□□ -0.54
CFTRP1-201ENST00000456646 PDAP1Q13442 181 aaKnown RBP11.7□□□□□ -0.54
CFTRP1-201ENST00000456646 LCE2DQ5TA82 110 aaPredicted RBP11.69□□□□□ -0.54
CFTRP1-201ENST00000456646 IER5LQ5T953 404 aa11.68□□□□□ -0.54
CFTRP1-201ENST00000456646 MAMSTRQ6ZN01 415 aa11.68□□□□□ -0.54
CFTRP1-201ENST00000456646 POTEFA5A3E0 1075 aa11.67□□□□□ -0.54
CFTRP1-201ENST00000456646 RIOK3O14730 519 aaKnown RBP11.67□□□□□ -0.54
CFTRP1-201ENST00000456646 ECM2O94769 699 aaPredicted RBP11.66□□□□□ -0.54
CFTRP1-201ENST00000456646 POTEJP0CG39 1038 aa11.65□□□□□ -0.54
CFTRP1-201ENST00000456646 COLQQ9Y215 455 aaPredicted RBP11.61□□□□□ -0.55
CFTRP1-201ENST00000456646 VGFO15240 615 aaPredicted RBP11.6□□□□□ -0.55
CFTRP1-201ENST00000456646 IRX5P78411 483 aaPredicted RBP11.6□□□□□ -0.55
CFTRP1-201ENST00000456646 RGL2O15211 777 aa11.58□□□□□ -0.56
CFTRP1-201ENST00000456646 FAM163AQ96GL9 167 aaPredicted RBP11.57□□□□□ -0.56
CFTRP1-201ENST00000456646 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.56□□□□□ -0.56
CFTRP1-201ENST00000456646 SEC24BO95487 1268 aa11.56□□□□□ -0.56
CFTRP1-201ENST00000456646 ZFP91Q96JP5 570 aaPredicted RBP11.56□□□□□ -0.56
CFTRP1-201ENST00000456646 TAOK2Q9UL54 1235 aa11.55□□□□□ -0.56
CFTRP1-201ENST00000456646 GOLGA2Q08379 1002 aa11.54□□□□□ -0.56
CFTRP1-201ENST00000456646 MKRN3Q13064 507 aaKnown RBP11.54□□□□□ -0.56
CFTRP1-201ENST00000456646 ILDR1Q86SU0 546 aaPredicted RBP11.54□□□□□ -0.56
CFTRP1-201ENST00000456646 OCEL1Q9H607 264 aa11.54□□□□□ -0.56
CFTRP1-201ENST00000456646 CABP2Q9NPB3 220 aa11.54□□□□□ -0.56
CFTRP1-201ENST00000456646 SCUBE2Q9NQ36 999 aa11.54□□□□□ -0.56
CFTRP1-201ENST00000456646 PLCG2P16885 1265 aa11.51□□□□□ -0.57
CFTRP1-201ENST00000456646 PDCD7Q8N8D1 485 aaKnown RBP11.5□□□□□ -0.57
CFTRP1-201ENST00000456646 EFCAB3Q8N7B9 438 aa11.47□□□□□ -0.57
CFTRP1-201ENST00000456646 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.46□□□□□ -0.57
CFTRP1-201ENST00000456646 BCL11BQ9C0K0 894 aaPredicted RBP11.45□□□□□ -0.58
CFTRP1-201ENST00000456646 CDAN1Q8IWY9 1227 aa11.44□□□□□ -0.58
CFTRP1-201ENST00000456646 STK25O00506 426 aa11.42□□□□□ -0.58
CFTRP1-201ENST00000456646 SOX12O15370 315 aa11.42□□□□□ -0.58
CFTRP1-201ENST00000456646 STK24Q9Y6E0 443 aa11.41□□□□□ -0.58
CFTRP1-201ENST00000456646 DPY19L2Q6NUT2 758 aa11.37□□□□□ -0.59
CFTRP1-201ENST00000456646 L3MBTL3Q96JM7 780 aaPredicted RBP11.37□□□□□ -0.59
CFTRP1-201ENST00000456646 HS6ST3Q8IZP7 471 aa11.36□□□□□ -0.59
CFTRP1-201ENST00000456646 PHF8Q9UPP1 1060 aa11.35□□□□□ -0.59
CFTRP1-201ENST00000456646 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
CFTRP1-201ENST00000456646 MS4A4AQ96JQ5 239 aa11.34□□□□□ -0.59
CFTRP1-201ENST00000456646 FBXO22Q8NEZ5 403 aa11.33□□□□□ -0.6
CFTRP1-201ENST00000456646 MFRPQ9BY79 579 aa11.32□□□□□ -0.6
CFTRP1-201ENST00000456646 DNAJC5Q9H3Z4 198 aa11.32□□□□□ -0.6
CFTRP1-201ENST00000456646 NLRP6P59044 892 aa11.31□□□□□ -0.6
CFTRP1-201ENST00000456646 TMEM121BQ9BXQ6 578 aaPredicted RBP11.3□□□□□ -0.6
CFTRP1-201ENST00000456646 CHGAP10645 457 aaKnown RBP11.29□□□□□ -0.6
CFTRP1-201ENST00000456646 BOLA1Q9Y3E2 137 aa11.29□□□□□ -0.6
CFTRP1-201ENST00000456646 RTN4Q9NQC3 1192 aaKnown RBP11.28□□□□□ -0.6
CFTRP1-201ENST00000456646 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.27□□□□□ -0.61
CFTRP1-201ENST00000456646 SLAIN1Q8ND83 568 aa11.25□□□□□ -0.61
CFTRP1-201ENST00000456646 MMRN1Q13201 1228 aa11.24□□□□□ -0.61
CFTRP1-201ENST00000456646 C3orf67Q6ZVT6 689 aa11.23□□□□□ -0.61
CFTRP1-201ENST00000456646 MICALL2Q8IY33 904 aa11.22□□□□□ -0.61
CFTRP1-201ENST00000456646 G3V3G9 751 aa11.21□□□□□ -0.61
CFTRP1-201ENST00000456646 NKX1-1Q15270 411 aaPredicted RBP11.21□□□□□ -0.61
CFTRP1-201ENST00000456646 ST18O60284 1047 aa11.19□□□□□ -0.62
CFTRP1-201ENST00000456646 SPNS2Q8IVW8 549 aa11.19□□□□□ -0.62
CFTRP1-201ENST00000456646 DCAF8L2P0C7V8 631 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 1018.1 ms