RNA–Protein interactions for RNA: ENST00000456459.1

PCDH9-AS4-201, PCDH9 antisense RNA 4, humanhuman

TSL 3 BASIC

Gene PCDH9-AS4, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS4-201ENST00000456459 CCDC61Q9Y6R9 512 aa15.18■□□□□ 0.02
PCDH9-AS4-201ENST00000456459 POTEIP0CG38 1075 aa15.14■□□□□ 0.01
PCDH9-AS4-201ENST00000456459 KLHL34Q8N239 644 aa15.09■□□□□ 0.01
PCDH9-AS4-201ENST00000456459 DCBLD2Q96PD2 775 aa15.08■□□□□ 0
PCDH9-AS4-201ENST00000456459 KIF12Q96FN5 646 aa15.07■□□□□ 0
PCDH9-AS4-201ENST00000456459 MS4A3Q96HJ5 214 aa15.07■□□□□ 0
PCDH9-AS4-201ENST00000456459 FAM212AQ96EL1 285 aa15.04■□□□□ -0
PCDH9-AS4-201ENST00000456459 IFNLR1Q8IU57 520 aaPredicted RBP15.03■□□□□ -0
PCDH9-AS4-201ENST00000456459 MAP3K13O43283 966 aa15□□□□□ -0.01
PCDH9-AS4-201ENST00000456459 DCAF8Q5TAQ9 597 aa14.98□□□□□ -0.01
PCDH9-AS4-201ENST00000456459 SPOCK2Q92563 424 aa14.9□□□□□ -0.02
PCDH9-AS4-201ENST00000456459 TRPC6Q9Y210 931 aa14.9□□□□□ -0.02
PCDH9-AS4-201ENST00000456459 SGIP1Q9BQI5 828 aa14.88□□□□□ -0.03
PCDH9-AS4-201ENST00000456459 PCDHB13Q9Y5F0 798 aa14.88□□□□□ -0.03
PCDH9-AS4-201ENST00000456459 PYGBP11216 843 aa14.87□□□□□ -0.03
PCDH9-AS4-201ENST00000456459 ASTLQ6HA08 431 aaPredicted RBP14.87□□□□□ -0.03
PCDH9-AS4-201ENST00000456459 PELP1Q8IZL8 1130 aaKnown RBP14.87□□□□□ -0.03
PCDH9-AS4-201ENST00000456459 ATMINO43313 823 aaPredicted RBP14.86□□□□□ -0.03
PCDH9-AS4-201ENST00000456459 GSE1Q14687 1217 aa14.86□□□□□ -0.03
PCDH9-AS4-201ENST00000456459 IFNL1Q8IU54 200 aa14.83□□□□□ -0.04
PCDH9-AS4-201ENST00000456459 LHX8Q68G74 356 aa14.82□□□□□ -0.04
PCDH9-AS4-201ENST00000456459 BMP2KQ9NSY1 1161 aaPredicted RBP14.82□□□□□ -0.04
PCDH9-AS4-201ENST00000456459 TIE1P35590 1138 aa14.79□□□□□ -0.04
PCDH9-AS4-201ENST00000456459 ATN1P54259 1190 aaPredicted RBP14.79□□□□□ -0.04
PCDH9-AS4-201ENST00000456459 CIZ1Q9ULV3 898 aaPredicted RBP14.76□□□□□ -0.05
PCDH9-AS4-201ENST00000456459 TTLL13PA6NNM8 815 aa14.74□□□□□ -0.05
PCDH9-AS4-201ENST00000456459 PCDHB8Q9UN66 801 aa14.72□□□□□ -0.05
PCDH9-AS4-201ENST00000456459 CHRM1P11229 460 aaPredicted RBP14.71□□□□□ -0.05
PCDH9-AS4-201ENST00000456459 SLC39A7Q92504 469 aa14.71□□□□□ -0.05
PCDH9-AS4-201ENST00000456459 METRNQ9UJH8 293 aa14.7□□□□□ -0.06
PCDH9-AS4-201ENST00000456459 C7P10643 843 aa14.69□□□□□ -0.06
PCDH9-AS4-201ENST00000456459 POTEB2H3BUK9 544 aa14.66□□□□□ -0.06
PCDH9-AS4-201ENST00000456459 TMEM106CQ9BVX2 250 aa14.66□□□□□ -0.06
PCDH9-AS4-201ENST00000456459 TRIM35Q9UPQ4 493 aa14.65□□□□□ -0.06
PCDH9-AS4-201ENST00000456459 ZNF467Q7Z7K2 595 aaPredicted RBP14.63□□□□□ -0.07
PCDH9-AS4-201ENST00000456459 POTEFA5A3E0 1075 aa14.58□□□□□ -0.08
PCDH9-AS4-201ENST00000456459 TRIM41Q8WV44 630 aa14.54□□□□□ -0.08
PCDH9-AS4-201ENST00000456459 IER5LQ5T953 404 aa14.53□□□□□ -0.08
PCDH9-AS4-201ENST00000456459 COLQQ9Y215 455 aaPredicted RBP14.53□□□□□ -0.08
PCDH9-AS4-201ENST00000456459 POTEJP0CG39 1038 aa14.52□□□□□ -0.09
PCDH9-AS4-201ENST00000456459 PSEN1P49768 467 aa14.51□□□□□ -0.09
PCDH9-AS4-201ENST00000456459 SEC24BO95487 1268 aa14.5□□□□□ -0.09
PCDH9-AS4-201ENST00000456459 OTUD5Q96G74 571 aa14.5□□□□□ -0.09
PCDH9-AS4-201ENST00000456459 PDAP1Q13442 181 aaKnown RBP14.47□□□□□ -0.09
PCDH9-AS4-201ENST00000456459 IRX5P78411 483 aaPredicted RBP14.43□□□□□ -0.1
PCDH9-AS4-201ENST00000456459 RNF25Q96BH1 459 aaPredicted RBP14.42□□□□□ -0.1
PCDH9-AS4-201ENST00000456459 PLCG2P16885 1265 aa14.39□□□□□ -0.11
PCDH9-AS4-201ENST00000456459 GOLGA2Q08379 1002 aa14.38□□□□□ -0.11
PCDH9-AS4-201ENST00000456459 RIOK3O14730 519 aaKnown RBP14.36□□□□□ -0.11
PCDH9-AS4-201ENST00000456459 MAMSTRQ6ZN01 415 aa14.36□□□□□ -0.11
PCDH9-AS4-201ENST00000456459 OCEL1Q9H607 264 aa14.36□□□□□ -0.11
PCDH9-AS4-201ENST00000456459 MKRN3Q13064 507 aaKnown RBP14.35□□□□□ -0.11
PCDH9-AS4-201ENST00000456459 PKD2Q13563 968 aa14.35□□□□□ -0.11
PCDH9-AS4-201ENST00000456459 CABP2Q9NPB3 220 aa14.34□□□□□ -0.11
PCDH9-AS4-201ENST00000456459 ECM2O94769 699 aaPredicted RBP14.32□□□□□ -0.12
PCDH9-AS4-201ENST00000456459 SCUBE2Q9NQ36 999 aa14.32□□□□□ -0.12
PCDH9-AS4-201ENST00000456459 PDCD7Q8N8D1 485 aaKnown RBP14.29□□□□□ -0.12
PCDH9-AS4-201ENST00000456459 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.28□□□□□ -0.12
PCDH9-AS4-201ENST00000456459 VGFO15240 615 aaPredicted RBP14.28□□□□□ -0.12
PCDH9-AS4-201ENST00000456459 ZFP91Q96JP5 570 aaPredicted RBP14.28□□□□□ -0.12
PCDH9-AS4-201ENST00000456459 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.27□□□□□ -0.13
PCDH9-AS4-201ENST00000456459 ILDR1Q86SU0 546 aaPredicted RBP14.23□□□□□ -0.13
PCDH9-AS4-201ENST00000456459 EFCAB3Q8N7B9 438 aa14.22□□□□□ -0.13
PCDH9-AS4-201ENST00000456459 RGL2O15211 777 aa14.21□□□□□ -0.13
PCDH9-AS4-201ENST00000456459 DPY19L2Q6NUT2 758 aa14.16□□□□□ -0.14
PCDH9-AS4-201ENST00000456459 TAOK2Q9UL54 1235 aa14.16□□□□□ -0.14
PCDH9-AS4-201ENST00000456459 BCL11BQ9C0K0 894 aaPredicted RBP14.14□□□□□ -0.15
PCDH9-AS4-201ENST00000456459 SLAIN1Q8ND83 568 aa14.13□□□□□ -0.15
PCDH9-AS4-201ENST00000456459 L3MBTL3Q96JM7 780 aaPredicted RBP14.13□□□□□ -0.15
PCDH9-AS4-201ENST00000456459 STK24Q9Y6E0 443 aa14.11□□□□□ -0.15
PCDH9-AS4-201ENST00000456459 STK25O00506 426 aa14.09□□□□□ -0.15
PCDH9-AS4-201ENST00000456459 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.09□□□□□ -0.15
PCDH9-AS4-201ENST00000456459 SOX12O15370 315 aa14.08□□□□□ -0.16
PCDH9-AS4-201ENST00000456459 PHF8Q9UPP1 1060 aa14.06□□□□□ -0.16
PCDH9-AS4-201ENST00000456459 C3orf67Q6ZVT6 689 aa14.05□□□□□ -0.16
PCDH9-AS4-201ENST00000456459 BOLA1Q9Y3E2 137 aa14.05□□□□□ -0.16
PCDH9-AS4-201ENST00000456459 MS4A4AQ96JQ5 239 aa14.03□□□□□ -0.16
PCDH9-AS4-201ENST00000456459 FAM163AQ96GL9 167 aaPredicted RBP14.02□□□□□ -0.17
PCDH9-AS4-201ENST00000456459 LCE2DQ5TA82 110 aaPredicted RBP14.01□□□□□ -0.17
PCDH9-AS4-201ENST00000456459 G3V3G9 751 aa13.99□□□□□ -0.17
PCDH9-AS4-201ENST00000456459 TMEM121BQ9BXQ6 578 aaPredicted RBP13.97□□□□□ -0.17
PCDH9-AS4-201ENST00000456459 NLRP6P59044 892 aa13.96□□□□□ -0.17
PCDH9-AS4-201ENST00000456459 FBXO22Q8NEZ5 403 aa13.96□□□□□ -0.17
PCDH9-AS4-201ENST00000456459 MFRPQ9BY79 579 aa13.96□□□□□ -0.17
PCDH9-AS4-201ENST00000456459 POTEMA6NI47 508 aa13.93□□□□□ -0.18
PCDH9-AS4-201ENST00000456459 MICALL2Q8IY33 904 aa13.93□□□□□ -0.18
PCDH9-AS4-201ENST00000456459 POTEGQ6S5H5 508 aa13.91□□□□□ -0.18
PCDH9-AS4-201ENST00000456459 HS6ST3Q8IZP7 471 aa13.9□□□□□ -0.18
PCDH9-AS4-201ENST00000456459 ST18O60284 1047 aa13.87□□□□□ -0.19
PCDH9-AS4-201ENST00000456459 CHGAP10645 457 aaKnown RBP13.86□□□□□ -0.19
PCDH9-AS4-201ENST00000456459 SNPHO15079 494 aa13.85□□□□□ -0.19
PCDH9-AS4-201ENST00000456459 TMEM92Q6UXU6 159 aa13.83□□□□□ -0.2
PCDH9-AS4-201ENST00000456459 PPP1R37O75864 691 aa13.76□□□□□ -0.21
PCDH9-AS4-201ENST00000456459 NKX1-1Q15270 411 aaPredicted RBP13.74□□□□□ -0.21
PCDH9-AS4-201ENST00000456459 DNAJC5Q9H3Z4 198 aa13.74□□□□□ -0.21
PCDH9-AS4-201ENST00000456459 HOXB3P14651 431 aaPredicted RBP13.73□□□□□ -0.21
PCDH9-AS4-201ENST00000456459 DCAF8L2P0C7V8 631 aa13.71□□□□□ -0.21
PCDH9-AS4-201ENST00000456459 MARVELD3Q96A59 401 aa13.69□□□□□ -0.22
PCDH9-AS4-201ENST00000456459 DOK7Q18PE1 504 aa13.65□□□□□ -0.22
PCDH9-AS4-201ENST00000456459 PCDH10Q9P2E7 1040 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms