RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 METRNQ9UJH8 293 aa15.73■□□□□ 0.11
CUL3-208ENST00000454323 MAMSTRQ6ZN01 415 aa15.72■□□□□ 0.11
CUL3-208ENST00000454323 ATMINO43313 823 aaPredicted RBP15.7■□□□□ 0.1
CUL3-208ENST00000454323 CCDC61Q9Y6R9 512 aa15.69■□□□□ 0.1
CUL3-208ENST00000454323 PELP1Q8IZL8 1130 aaKnown RBP15.67■□□□□ 0.1
CUL3-208ENST00000454323 MIER1Q8N108 512 aa15.67■□□□□ 0.1
CUL3-208ENST00000454323 POTEB2H3BUK9 544 aa15.65■□□□□ 0.1
CUL3-208ENST00000454323 ZBTB47Q9UFB7 747 aaPredicted RBP15.64■□□□□ 0.09
CUL3-208ENST00000454323 PLSCR2Q9NRY7 297 aa15.62■□□□□ 0.09
CUL3-208ENST00000454323 KIF12Q96FN5 646 aa15.61■□□□□ 0.09
CUL3-208ENST00000454323 SCUBE2Q9NQ36 999 aa15.58■□□□□ 0.08
CUL3-208ENST00000454323 PLCD3Q8N3E9 789 aa15.57■□□□□ 0.08
CUL3-208ENST00000454323 TIE1P35590 1138 aa15.56■□□□□ 0.08
CUL3-208ENST00000454323 ATN1P54259 1190 aaPredicted RBP15.53■□□□□ 0.08
CUL3-208ENST00000454323 POTEMA6NI47 508 aa15.52■□□□□ 0.08
CUL3-208ENST00000454323 SGIP1Q9BQI5 828 aa15.5■□□□□ 0.07
CUL3-208ENST00000454323 PCDH10Q9P2E7 1040 aa15.5■□□□□ 0.07
CUL3-208ENST00000454323 MAP3K13O43283 966 aa15.48■□□□□ 0.07
CUL3-208ENST00000454323 RASEFQ8IZ41 740 aa15.48■□□□□ 0.07
CUL3-208ENST00000454323 BMP2KQ9NSY1 1161 aaPredicted RBP15.48■□□□□ 0.07
CUL3-208ENST00000454323 POTEGQ6S5H5 508 aa15.47■□□□□ 0.07
CUL3-208ENST00000454323 SEC24BO95487 1268 aa15.41■□□□□ 0.06
CUL3-208ENST00000454323 IER5LQ5T953 404 aa15.39■□□□□ 0.05
CUL3-208ENST00000454323 FAM212AQ96EL1 285 aa15.39■□□□□ 0.05
CUL3-208ENST00000454323 PCDHB13Q9Y5F0 798 aa15.38■□□□□ 0.05
CUL3-208ENST00000454323 POTEJP0CG39 1038 aa15.37■□□□□ 0.05
CUL3-208ENST00000454323 TTLL13PA6NNM8 815 aa15.36■□□□□ 0.05
CUL3-208ENST00000454323 TRPC6Q9Y210 931 aa15.33■□□□□ 0.04
CUL3-208ENST00000454323 NUBP1P53384 320 aa15.3■□□□□ 0.04
CUL3-208ENST00000454323 TRIM35Q9UPQ4 493 aa15.29■□□□□ 0.04
CUL3-208ENST00000454323 POTEFA5A3E0 1075 aa15.27■□□□□ 0.04
CUL3-208ENST00000454323 FAM163AQ96GL9 167 aaPredicted RBP15.27■□□□□ 0.04
CUL3-208ENST00000454323 FBXO3Q9UK99 471 aa15.24■□□□□ 0.03
CUL3-208ENST00000454323 FKBP8Q14318 412 aa15.23■□□□□ 0.03
CUL3-208ENST00000454323 COLQQ9Y215 455 aaPredicted RBP15.2■□□□□ 0.02
CUL3-208ENST00000454323 IFNL1Q8IU54 200 aa15.19■□□□□ 0.02
CUL3-208ENST00000454323 TMEM106CQ9BVX2 250 aa15.19■□□□□ 0.02
CUL3-208ENST00000454323 PLCG2P16885 1265 aa15.18■□□□□ 0.02
CUL3-208ENST00000454323 LCE2DQ5TA82 110 aaPredicted RBP15.12■□□□□ 0.01
CUL3-208ENST00000454323 DCAF8Q5TAQ9 597 aa15.12■□□□□ 0.01
CUL3-208ENST00000454323 SLAIN1Q8ND83 568 aa15.08■□□□□ 0
CUL3-208ENST00000454323 OCEL1Q9H607 264 aa15.03■□□□□ -0
CUL3-208ENST00000454323 IRX5P78411 483 aaPredicted RBP15.02■□□□□ -0
CUL3-208ENST00000454323 GSE1Q14687 1217 aa15.02■□□□□ -0
CUL3-208ENST00000454323 PYGBP11216 843 aa15□□□□□ -0.01
CUL3-208ENST00000454323 SNPHO15079 494 aa14.99□□□□□ -0.01
CUL3-208ENST00000454323 ZNF467Q7Z7K2 595 aaPredicted RBP14.98□□□□□ -0.01
CUL3-208ENST00000454323 KLHL34Q8N239 644 aa14.97□□□□□ -0.01
CUL3-208ENST00000454323 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.95□□□□□ -0.02
CUL3-208ENST00000454323 GOLGA2Q08379 1002 aa14.94□□□□□ -0.02
CUL3-208ENST00000454323 CDAN1Q8IWY9 1227 aa14.94□□□□□ -0.02
CUL3-208ENST00000454323 TMEM121BQ9BXQ6 578 aaPredicted RBP14.93□□□□□ -0.02
CUL3-208ENST00000454323 ST18O60284 1047 aa14.9□□□□□ -0.02
CUL3-208ENST00000454323 VASPP50552 380 aaPredicted RBP14.89□□□□□ -0.03
CUL3-208ENST00000454323 PCDHB8Q9UN66 801 aa14.89□□□□□ -0.03
CUL3-208ENST00000454323 MKRN3Q13064 507 aaKnown RBP14.87□□□□□ -0.03
CUL3-208ENST00000454323 CHRM1P11229 460 aaPredicted RBP14.85□□□□□ -0.03
CUL3-208ENST00000454323 L3MBTL3Q96JM7 780 aaPredicted RBP14.85□□□□□ -0.03
CUL3-208ENST00000454323 C3orf67Q6ZVT6 689 aa14.84□□□□□ -0.03
CUL3-208ENST00000454323 PSEN1P49768 467 aa14.73□□□□□ -0.05
CUL3-208ENST00000454323 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.73□□□□□ -0.052e-16■■■□□ 17
CUL3-208ENST00000454323 PDCD7Q8N8D1 485 aaKnown RBP14.72□□□□□ -0.05
CUL3-208ENST00000454323 PDAP1Q13442 181 aaKnown RBP14.71□□□□□ -0.05
CUL3-208ENST00000454323 G3V3G9 751 aa14.69□□□□□ -0.06
CUL3-208ENST00000454323 SPOCK2Q92563 424 aa14.67□□□□□ -0.06
CUL3-208ENST00000454323 EMP3P54852 163 aa14.61□□□□□ -0.07
CUL3-208ENST00000454323 CIZ1Q9ULV3 898 aaPredicted RBP14.6□□□□□ -0.07
CUL3-208ENST00000454323 MARVELD3Q96A59 401 aa14.59□□□□□ -0.07
CUL3-208ENST00000454323 TRIM41Q8WV44 630 aa14.58□□□□□ -0.08
CUL3-208ENST00000454323 ILDR1Q86SU0 546 aaPredicted RBP14.57□□□□□ -0.08
CUL3-208ENST00000454323 SPNS2Q8IVW8 549 aa14.56□□□□□ -0.08
CUL3-208ENST00000454323 MMRN1Q13201 1228 aa14.55□□□□□ -0.08
CUL3-208ENST00000454323 CABP2Q9NPB3 220 aa14.54□□□□□ -0.08
CUL3-208ENST00000454323 BOLA1Q9Y3E2 137 aa14.52□□□□□ -0.09
CUL3-208ENST00000454323 IFNLR1Q8IU57 520 aaPredicted RBP14.48□□□□□ -0.09
CUL3-208ENST00000454323 HS3ST6Q96QI5 342 aa14.45□□□□□ -0.1
CUL3-208ENST00000454323 FAM205CA6NFA0 338 aa14.43□□□□□ -0.1
CUL3-208ENST00000454323 DOK7Q18PE1 504 aa14.43□□□□□ -0.1
CUL3-208ENST00000454323 ZNF710Q8N1W2 664 aa14.43□□□□□ -0.1
CUL3-208ENST00000454323 RIMBP2O15034 1052 aa14.42□□□□□ -0.1
CUL3-208ENST00000454323 DPY19L2Q6NUT2 758 aa14.4□□□□□ -0.1
CUL3-208ENST00000454323 HOXB1P14653 301 aaPredicted RBP14.34□□□□□ -0.11
CUL3-208ENST00000454323 HOXB3P14651 431 aaPredicted RBP14.31□□□□□ -0.12
CUL3-208ENST00000454323 KRTAP3-3Q9BYR6 98 aa14.31□□□□□ -0.12
CUL3-208ENST00000454323 KRTAP3-2Q9BYR7 98 aa14.31□□□□□ -0.12
CUL3-208ENST00000454323 EFCAB3Q8N7B9 438 aa14.3□□□□□ -0.12
CUL3-208ENST00000454323 ERBB3P21860 1342 aa14.29□□□□□ -0.12
CUL3-208ENST00000454323 SOX12O15370 315 aa14.28□□□□□ -0.12
CUL3-208ENST00000454323 ZSWIM6Q9HCJ5 1215 aa14.28□□□□□ -0.12
CUL3-208ENST00000454323 POTEB3A0JP26 581 aa14.24□□□□□ -0.13
CUL3-208ENST00000454323 RIOK3O14730 519 aaKnown RBP14.24□□□□□ -0.13
CUL3-208ENST00000454323 POTEBQ6S5H4 581 aa14.24□□□□□ -0.13
CUL3-208ENST00000454323 TAOK2Q9UL54 1235 aa14.24□□□□□ -0.13
CUL3-208ENST00000454323 VGFO15240 615 aaPredicted RBP14.22□□□□□ -0.13
CUL3-208ENST00000454323 MICALL2Q8IY33 904 aa14.21□□□□□ -0.13
CUL3-208ENST00000454323 VARS2Q5ST30 1063 aaKnown RBP14.13□□□□□ -0.15
CUL3-208ENST00000454323 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.12□□□□□ -0.15
CUL3-208ENST00000454323 PTGER2P43116 358 aa14.12□□□□□ -0.15
CUL3-208ENST00000454323 ZFP91Q96JP5 570 aaPredicted RBP14.12□□□□□ -0.15
CUL3-208ENST00000454323 RNF166Q96A37 237 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms