RNA–Protein interactions for RNA: ENST00000453944.1

DDX59-208, Transcript of DEAD-box helicase 59, humanhuman

TSL 3

Gene DDX59, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59-208ENST00000453944 TRIM41Q8WV44 630 aa8.86□□□□□ -0.99
DDX59-208ENST00000453944 CREBZFQ9NS37 354 aa8.86□□□□□ -0.99
DDX59-208ENST00000453944 PRR29P0C7W0 189 aa8.84□□□□□ -0.99
DDX59-208ENST00000453944 HS6ST3Q8IZP7 471 aa8.84□□□□□ -0.99
DDX59-208ENST00000453944 AKT1S1Q96B36 256 aa8.84□□□□□ -0.99
DDX59-208ENST00000453944 MNX1P50219 401 aaPredicted RBP8.83□□□□□ -1
DDX59-208ENST00000453944 REM2Q8IYK8 340 aaPredicted RBP8.82□□□□□ -1
DDX59-208ENST00000453944 NKX1-1Q15270 411 aaPredicted RBP8.81□□□□□ -1
DDX59-208ENST00000453944 RIOK3O14730 519 aaKnown RBP8.8□□□□□ -1
DDX59-208ENST00000453944 RBM42Q9BTD8 480 aaKnown RBP8.8□□□□□ -1
DDX59-208ENST00000453944 TPRNQ4KMQ1 711 aa8.79□□□□□ -1
DDX59-208ENST00000453944 RASEFQ8IZ41 740 aa8.79□□□□□ -1
DDX59-208ENST00000453944 FAM212AQ96EL1 285 aa8.76□□□□□ -1.01
DDX59-208ENST00000453944 DNAJC5Q9H3Z4 198 aa8.75□□□□□ -1.01
DDX59-208ENST00000453944 STK25O00506 426 aa8.74□□□□□ -1.01
DDX59-208ENST00000453944 GTPBP6O43824 516 aaPredicted RBP8.74□□□□□ -1.01
DDX59-208ENST00000453944 PYGBP11216 843 aa8.72□□□□□ -1.01
DDX59-208ENST00000453944 CHRM1P11229 460 aaPredicted RBP8.72□□□□□ -1.01
DDX59-208ENST00000453944 PITPNM1O00562 1244 aa8.71□□□□□ -1.02
DDX59-208ENST00000453944 VGFO15240 615 aaPredicted RBP8.71□□□□□ -1.02
DDX59-208ENST00000453944 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.69□□□□□ -1.02
DDX59-208ENST00000453944 ZFP91Q96JP5 570 aaPredicted RBP8.69□□□□□ -1.02
DDX59-208ENST00000453944 BCL11BQ9C0K0 894 aaPredicted RBP8.68□□□□□ -1.02
DDX59-208ENST00000453944 STK24Q9Y6E0 443 aa8.68□□□□□ -1.02
DDX59-208ENST00000453944 CHADLQ6NUI6 762 aa8.67□□□□□ -1.02
DDX59-208ENST00000453944 SGIP1Q9BQI5 828 aa8.64□□□□□ -1.03
DDX59-208ENST00000453944 TSPYL2Q9H2G4 693 aaPredicted RBP8.63□□□□□ -1.03
DDX59-208ENST00000453944 NBR1Q14596 966 aa8.62□□□□□ -1.03
DDX59-208ENST00000453944 PCDHB8Q9UN66 801 aa8.56□□□□□ -1.04
DDX59-208ENST00000453944 FARP1Q9Y4F1 1045 aaPredicted RBP8.56□□□□□ -1.04
DDX59-208ENST00000453944 PCDHB13Q9Y5F0 798 aa8.56□□□□□ -1.04
DDX59-208ENST00000453944 CADPS2Q86UW7 1296 aa8.52□□□□□ -1.05
DDX59-208ENST00000453944 RYDENQ9NUL5 291 aaKnown RBP8.51□□□□□ -1.05
DDX59-208ENST00000453944 PRKAR2AP13861 404 aaKnown RBP8.5□□□□□ -1.05
DDX59-208ENST00000453944 ZNF467Q7Z7K2 595 aaPredicted RBP8.5□□□□□ -1.05
DDX59-208ENST00000453944 PDAP1Q13442 181 aaKnown RBP8.49□□□□□ -1.05
DDX59-208ENST00000453944 PSEN1P49768 467 aa8.48□□□□□ -1.05
DDX59-208ENST00000453944 CCDC61Q9Y6R9 512 aa8.48□□□□□ -1.05
DDX59-208ENST00000453944 MFRPQ9BY79 579 aa8.45□□□□□ -1.06
DDX59-208ENST00000453944 FXR2P51116 673 aaKnown RBP eCLIP8.44□□□□□ -1.06
DDX59-208ENST00000453944 IFNL1Q8IU54 200 aa8.44□□□□□ -1.06
DDX59-208ENST00000453944 PPP1R37O75864 691 aa8.43□□□□□ -1.06
DDX59-208ENST00000453944 ZNF579Q8NAF0 562 aaKnown RBP8.43□□□□□ -1.06
DDX59-208ENST00000453944 MAP3K13O43283 966 aa8.42□□□□□ -1.06
DDX59-208ENST00000453944 WDR70Q9NW82 654 aa8.42□□□□□ -1.06
DDX59-208ENST00000453944 KCNV2Q8TDN2 545 aa8.41□□□□□ -1.06
DDX59-208ENST00000453944 EFCAB3Q8N7B9 438 aa8.4□□□□□ -1.06
DDX59-208ENST00000453944 KIF12Q96FN5 646 aa8.39□□□□□ -1.07
DDX59-208ENST00000453944 CABP2Q9NPB3 220 aa8.38□□□□□ -1.07
DDX59-208ENST00000453944 P3H3Q8IVL6 736 aa8.37□□□□□ -1.07
DDX59-208ENST00000453944 PIP4P2Q8N4L2 257 aa8.37□□□□□ -1.07
DDX59-208ENST00000453944 PHF8Q9UPP1 1060 aa8.37□□□□□ -1.07
DDX59-208ENST00000453944 FBXO22Q8NEZ5 403 aa8.36□□□□□ -1.07
DDX59-208ENST00000453944 PAK3O75914 559 aaPredicted RBP8.35□□□□□ -1.07
DDX59-208ENST00000453944 CHRDL2Q6WN34 429 aa8.33□□□□□ -1.08
DDX59-208ENST00000453944 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.33□□□□□ -1.08
DDX59-208ENST00000453944 SOX12O15370 315 aa8.32□□□□□ -1.08
DDX59-208ENST00000453944 NLRP6P59044 892 aa8.32□□□□□ -1.08
DDX59-208ENST00000453944 ZRANB1Q9UGI0 708 aa8.32□□□□□ -1.08
DDX59-208ENST00000453944 PHF12Q96QT6 1004 aa8.31□□□□□ -1.08
DDX59-208ENST00000453944 LMOD2Q6P5Q4 547 aa8.3□□□□□ -1.08
DDX59-208ENST00000453944 MS4A4AQ96JQ5 239 aa8.28□□□□□ -1.08
DDX59-208ENST00000453944 CD44P16070 742 aaKnown RBP8.27□□□□□ -1.09
DDX59-208ENST00000453944 E2F4Q16254 413 aa8.27□□□□□ -1.09
DDX59-208ENST00000453944 TRPC6Q9Y210 931 aa8.27□□□□□ -1.09
DDX59-208ENST00000453944 NCKAP5LQ9HCH0 1330 aa8.27□□□□□ -1.09
DDX59-208ENST00000453944 ARHGEF1Q92888 912 aaKnown RBP8.26□□□□□ -1.09
DDX59-208ENST00000453944 SEMA3EO15041 775 aa8.25□□□□□ -1.09
DDX59-208ENST00000453944 LARP6Q9BRS8 491 aaKnown RBP8.25□□□□□ -1.09
DDX59-208ENST00000453944 TMEM106CQ9BVX2 250 aa8.24□□□□□ -1.09
DDX59-208ENST00000453944 GTF3C3Q9Y5Q9 886 aa8.22□□□□□ -1.09
DDX59-208ENST00000453944 TULP1O00294 542 aaPredicted RBP8.21□□□□□ -1.1
DDX59-208ENST00000453944 PDE4AP27815 886 aa8.2□□□□□ -1.1
DDX59-208ENST00000453944 ZC3H15Q8WU90 426 aaKnown RBP8.2□□□□□ -1.1
DDX59-208ENST00000453944 TIMELESSQ9UNS1 1208 aa8.2□□□□□ -1.1
DDX59-208ENST00000453944 TESPA1A2RU30 521 aaPredicted RBP8.19□□□□□ -1.1
DDX59-208ENST00000453944 GOLGA2Q08379 1002 aa8.19□□□□□ -1.1
DDX59-208ENST00000453944 MS4A3Q96HJ5 214 aa8.19□□□□□ -1.1
DDX59-208ENST00000453944 TMEM132AQ24JP5 1023 aa8.17□□□□□ -1.1
DDX59-208ENST00000453944 CRISPLD2Q9H0B8 497 aa8.17□□□□□ -1.1
DDX59-208ENST00000453944 MKRN3Q13064 507 aaKnown RBP8.16□□□□□ -1.1
DDX59-208ENST00000453944 MFSD10Q14728 455 aa8.16□□□□□ -1.1
DDX59-208ENST00000453944 DDX27Q96GQ7 796 aaKnown RBP8.16□□□□□ -1.1
DDX59-208ENST00000453944 SLC24A3Q9HC58 644 aa8.14□□□□□ -1.11
DDX59-208ENST00000453944 C19orf67A6NJJ6 358 aa8.13□□□□□ -1.11
DDX59-208ENST00000453944 BRPF1P55201 1214 aaPredicted RBP8.13□□□□□ -1.11
DDX59-208ENST00000453944 TTLL13PA6NNM8 815 aa8.12□□□□□ -1.11
DDX59-208ENST00000453944 CAMK2BQ13554 666 aa8.11□□□□□ -1.11
DDX59-208ENST00000453944 DPY19L2Q6NUT2 758 aa8.11□□□□□ -1.11
DDX59-208ENST00000453944 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.11□□□□□ -1.11
DDX59-208ENST00000453944 BMP2KQ9NSY1 1161 aaPredicted RBP8.1□□□□□ -1.11
DDX59-208ENST00000453944 MLLT3P42568 568 aaPredicted RBP8.09□□□□□ -1.11
DDX59-208ENST00000453944 ARIH1Q9Y4X5 557 aaPredicted RBP8.09□□□□□ -1.11
DDX59-208ENST00000453944 ZMYND10O75800 440 aa8.08□□□□□ -1.12
DDX59-208ENST00000453944 TIE1P35590 1138 aa8.08□□□□□ -1.12
DDX59-208ENST00000453944 NEUROD2Q15784 382 aa8.08□□□□□ -1.12
DDX59-208ENST00000453944 ILDR1Q86SU0 546 aaPredicted RBP8.08□□□□□ -1.12
DDX59-208ENST00000453944 PPP1R15BQ5SWA1 713 aa8.07□□□□□ -1.12
DDX59-208ENST00000453944 RBM26Q5T8P6 1007 aaKnown RBP8.07□□□□□ -1.12
DDX59-208ENST00000453944 SMYD5Q6GMV2 418 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms