RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 POTEDQ86YR6 584 aa8.96□□□□□ -0.98
HMGN3P1-201ENST00000453847 GSE1Q14687 1217 aa8.94□□□□□ -0.98
HMGN3P1-201ENST00000453847 RIOK3O14730 519 aaKnown RBP8.92□□□□□ -0.98
HMGN3P1-201ENST00000453847 MNX1P50219 401 aaPredicted RBP8.91□□□□□ -0.98
HMGN3P1-201ENST00000453847 NBR1Q14596 966 aa8.91□□□□□ -0.98
HMGN3P1-201ENST00000453847 DCAF8Q5TAQ9 597 aa8.9□□□□□ -0.98
HMGN3P1-201ENST00000453847 CREBZFQ9NS37 354 aa8.89□□□□□ -0.99
HMGN3P1-201ENST00000453847 CHRM1P11229 460 aaPredicted RBP8.86□□□□□ -0.99
HMGN3P1-201ENST00000453847 STK25O00506 426 aa8.84□□□□□ -0.99
HMGN3P1-201ENST00000453847 VGFO15240 615 aaPredicted RBP8.83□□□□□ -1
HMGN3P1-201ENST00000453847 RASEFQ8IZ41 740 aa8.83□□□□□ -1
HMGN3P1-201ENST00000453847 SGIP1Q9BQI5 828 aa8.83□□□□□ -1
HMGN3P1-201ENST00000453847 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.8□□□□□ -1
HMGN3P1-201ENST00000453847 ZFP91Q96JP5 570 aaPredicted RBP8.8□□□□□ -1
HMGN3P1-201ENST00000453847 SPDYE1Q8NFV5 336 aaPredicted RBP8.79□□□□□ -1
HMGN3P1-201ENST00000453847 TIMELESSQ9UNS1 1208 aa8.79□□□□□ -1
HMGN3P1-201ENST00000453847 FAM212AQ96EL1 285 aa8.78□□□□□ -1
HMGN3P1-201ENST00000453847 BCL11BQ9C0K0 894 aaPredicted RBP8.78□□□□□ -1
HMGN3P1-201ENST00000453847 STK24Q9Y6E0 443 aa8.76□□□□□ -1.01
HMGN3P1-201ENST00000453847 AKT1S1Q96B36 256 aa8.75□□□□□ -1.01
HMGN3P1-201ENST00000453847 PRR29P0C7W0 189 aa8.74□□□□□ -1.01
HMGN3P1-201ENST00000453847 PYGBP11216 843 aa8.74□□□□□ -1.01
HMGN3P1-201ENST00000453847 TULP1O00294 542 aaPredicted RBP8.73□□□□□ -1.01
HMGN3P1-201ENST00000453847 CADPS2Q86UW7 1296 aa8.73□□□□□ -1.01
HMGN3P1-201ENST00000453847 CLEC11AQ9Y240 323 aa8.73□□□□□ -1.01
HMGN3P1-201ENST00000453847 CACNB1Q02641 598 aaPredicted RBP8.72□□□□□ -1.01
HMGN3P1-201ENST00000453847 REM2Q8IYK8 340 aaPredicted RBP8.72□□□□□ -1.01
HMGN3P1-201ENST00000453847 GTF3C3Q9Y5Q9 886 aa8.72□□□□□ -1.01
HMGN3P1-201ENST00000453847 RYDENQ9NUL5 291 aaKnown RBP8.66□□□□□ -1.02
HMGN3P1-201ENST00000453847 KCNV2Q8TDN2 545 aa8.65□□□□□ -1.02
HMGN3P1-201ENST00000453847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.64□□□□□ -1.03
HMGN3P1-201ENST00000453847 TMEM132AQ24JP5 1023 aa8.63□□□□□ -1.03
HMGN3P1-201ENST00000453847 RBM42Q9BTD8 480 aaKnown RBP8.63□□□□□ -1.03
HMGN3P1-201ENST00000453847 PITPNM1O00562 1244 aa8.61□□□□□ -1.03
HMGN3P1-201ENST00000453847 P3H3Q8IVL6 736 aa8.6□□□□□ -1.03
HMGN3P1-201ENST00000453847 LMOD2Q6P5Q4 547 aa8.59□□□□□ -1.03
HMGN3P1-201ENST00000453847 MFRPQ9BY79 579 aa8.58□□□□□ -1.04
HMGN3P1-201ENST00000453847 PCDHB8Q9UN66 801 aa8.58□□□□□ -1.04
HMGN3P1-201ENST00000453847 PCDHB13Q9Y5F0 798 aa8.58□□□□□ -1.04
HMGN3P1-201ENST00000453847 PPP1R37O75864 691 aa8.56□□□□□ -1.04
HMGN3P1-201ENST00000453847 TSPYL2Q9H2G4 693 aaPredicted RBP8.56□□□□□ -1.04
HMGN3P1-201ENST00000453847 PDAP1Q13442 181 aaKnown RBP8.55□□□□□ -1.04
HMGN3P1-201ENST00000453847 CHADLQ6NUI6 762 aa8.55□□□□□ -1.04
HMGN3P1-201ENST00000453847 ZNF467Q7Z7K2 595 aaPredicted RBP8.55□□□□□ -1.04
HMGN3P1-201ENST00000453847 WDR70Q9NW82 654 aa8.55□□□□□ -1.04
HMGN3P1-201ENST00000453847 BRPF1P55201 1214 aaPredicted RBP8.52□□□□□ -1.05
HMGN3P1-201ENST00000453847 PSEN1P49768 467 aa8.51□□□□□ -1.05
HMGN3P1-201ENST00000453847 CCDC61Q9Y6R9 512 aa8.51□□□□□ -1.05
HMGN3P1-201ENST00000453847 FBXO22Q8NEZ5 403 aa8.5□□□□□ -1.05
HMGN3P1-201ENST00000453847 FARP1Q9Y4F1 1045 aaPredicted RBP8.5□□□□□ -1.05
HMGN3P1-201ENST00000453847 ZC3H15Q8WU90 426 aaKnown RBP8.49□□□□□ -1.05
HMGN3P1-201ENST00000453847 ZNF579Q8NAF0 562 aaKnown RBP8.48□□□□□ -1.05
HMGN3P1-201ENST00000453847 ARHGEF1Q92888 912 aaKnown RBP8.48□□□□□ -1.05
HMGN3P1-201ENST00000453847 TESPA1A2RU30 521 aaPredicted RBP8.46□□□□□ -1.06
HMGN3P1-201ENST00000453847 SEMA3EO15041 775 aa8.46□□□□□ -1.06
HMGN3P1-201ENST00000453847 ERICH6Q7L0X2 663 aa8.45□□□□□ -1.06
HMGN3P1-201ENST00000453847 EFCAB3Q8N7B9 438 aa8.45□□□□□ -1.06
HMGN3P1-201ENST00000453847 E2F4Q16254 413 aa8.44□□□□□ -1.06
HMGN3P1-201ENST00000453847 IFNL1Q8IU54 200 aa8.44□□□□□ -1.06
HMGN3P1-201ENST00000453847 PHF8Q9UPP1 1060 aa8.44□□□□□ -1.06
HMGN3P1-201ENST00000453847 SLC24A3Q9HC58 644 aa8.43□□□□□ -1.06
HMGN3P1-201ENST00000453847 NCKAP5LQ9HCH0 1330 aa8.43□□□□□ -1.06
HMGN3P1-201ENST00000453847 ARXQ96QS3 562 aa8.42□□□□□ -1.06
HMGN3P1-201ENST00000453847 C14orf37Q86TY3 774 aa8.41□□□□□ -1.06
HMGN3P1-201ENST00000453847 MAP3K13O43283 966 aa8.4□□□□□ -1.06
HMGN3P1-201ENST00000453847 NLRP6P59044 892 aa8.4□□□□□ -1.06
HMGN3P1-201ENST00000453847 SOX12O15370 315 aa8.39□□□□□ -1.07
HMGN3P1-201ENST00000453847 KIF12Q96FN5 646 aa8.39□□□□□ -1.07
HMGN3P1-201ENST00000453847 MS4A4AQ96JQ5 239 aa8.39□□□□□ -1.07
HMGN3P1-201ENST00000453847 CABP2Q9NPB3 220 aa8.39□□□□□ -1.07
HMGN3P1-201ENST00000453847 ZMYND10O75800 440 aa8.38□□□□□ -1.07
HMGN3P1-201ENST00000453847 PRKAR2AP13861 404 aaKnown RBP8.36□□□□□ -1.07
HMGN3P1-201ENST00000453847 MFSD10Q14728 455 aa8.36□□□□□ -1.07
HMGN3P1-201ENST00000453847 NEUROD2Q15784 382 aa8.36□□□□□ -1.07
HMGN3P1-201ENST00000453847 LARP6Q9BRS8 491 aaKnown RBP8.35□□□□□ -1.07
HMGN3P1-201ENST00000453847 ARIH1Q9Y4X5 557 aaPredicted RBP8.35□□□□□ -1.07
HMGN3P1-201ENST00000453847 FXR2P51116 673 aaKnown RBP eCLIP8.34□□□□□ -1.07
HMGN3P1-201ENST00000453847 CRISPLD2Q9H0B8 497 aa8.34□□□□□ -1.07
HMGN3P1-201ENST00000453847 PDE4AP27815 886 aa8.31□□□□□ -1.08
HMGN3P1-201ENST00000453847 CAMK2BQ13554 666 aa8.31□□□□□ -1.08
HMGN3P1-201ENST00000453847 BARGINQ6ZT62 677 aa8.31□□□□□ -1.08
HMGN3P1-201ENST00000453847 MLLT3P42568 568 aaPredicted RBP8.27□□□□□ -1.09
HMGN3P1-201ENST00000453847 SUPT5HO00267 1087 aaKnown RBP8.26□□□□□ -1.09
HMGN3P1-201ENST00000453847 RBM26Q5T8P6 1007 aaKnown RBP8.26□□□□□ -1.09
HMGN3P1-201ENST00000453847 DDX27Q96GQ7 796 aaKnown RBP8.26□□□□□ -1.09
HMGN3P1-201ENST00000453847 SMYD5Q6GMV2 418 aa8.25□□□□□ -1.09
HMGN3P1-201ENST00000453847 HOMEZQ8IX15 550 aa8.25□□□□□ -1.09
HMGN3P1-201ENST00000453847 GPBP1L1Q9HC44 474 aaPredicted RBP8.24□□□□□ -1.09
HMGN3P1-201ENST00000453847 TRPC6Q9Y210 931 aa8.24□□□□□ -1.09
HMGN3P1-201ENST00000453847 PHF12Q96QT6 1004 aa8.23□□□□□ -1.09
HMGN3P1-201ENST00000453847 DAXXQ9UER7 740 aaPredicted RBP8.23□□□□□ -1.09
HMGN3P1-201ENST00000453847 PAK3O75914 559 aaPredicted RBP8.22□□□□□ -1.09
HMGN3P1-201ENST00000453847 PIP4P2Q8N4L2 257 aa8.21□□□□□ -1.1
HMGN3P1-201ENST00000453847 AK7Q96M32 723 aa8.21□□□□□ -1.1
HMGN3P1-201ENST00000453847 ILDR1Q86SU0 546 aaPredicted RBP8.2□□□□□ -1.1
HMGN3P1-201ENST00000453847 ZRANB1Q9UGI0 708 aa8.2□□□□□ -1.1
HMGN3P1-201ENST00000453847 TMEM106CQ9BVX2 250 aa8.19□□□□□ -1.1
HMGN3P1-201ENST00000453847 EMILIN3Q9NT22 766 aa8.18□□□□□ -1.1
HMGN3P1-201ENST00000453847 IL27Q8NEV9 243 aa8.17□□□□□ -1.1
HMGN3P1-201ENST00000453847 GPHNQ9NQX3 736 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms