RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 PLEKHG5O94827 1062 aa12.81□□□□□ -0.36
USP25-206ENST00000453553 POTEB2H3BUK9 544 aa12.8□□□□□ -0.36
USP25-206ENST00000453553 OTUD5Q96G74 571 aa12.77□□□□□ -0.37
USP25-206ENST00000453553 PAK3O75914 559 aaPredicted RBP12.74□□□□□ -0.37
USP25-206ENST00000453553 SPOCK2Q92563 424 aa12.74□□□□□ -0.37
USP25-206ENST00000453553 ZBTB47Q9UFB7 747 aaPredicted RBP12.74□□□□□ -0.37
USP25-206ENST00000453553 PELP1Q8IZL8 1130 aaKnown RBP12.73□□□□□ -0.37
USP25-206ENST00000453553 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.37
USP25-206ENST00000453553 PLSCR2Q9NRY7 297 aa12.66□□□□□ -0.38
USP25-206ENST00000453553 MS4A3Q96HJ5 214 aa12.63□□□□□ -0.39
USP25-206ENST00000453553 ASTLQ6HA08 431 aaPredicted RBP12.6□□□□□ -0.39
USP25-206ENST00000453553 ATMINO43313 823 aaPredicted RBP12.58□□□□□ -0.4
USP25-206ENST00000453553 POTEJP0CG39 1038 aa12.57□□□□□ -0.4
USP25-206ENST00000453553 PKD2Q13563 968 aa12.56□□□□□ -0.4
USP25-206ENST00000453553 METRNQ9UJH8 293 aa12.56□□□□□ -0.4
USP25-206ENST00000453553 NUBP1P53384 320 aa12.55□□□□□ -0.4
USP25-206ENST00000453553 TSPYL2Q9H2G4 693 aaPredicted RBP12.53□□□□□ -0.4
USP25-206ENST00000453553 POTEMA6NI47 508 aa12.52□□□□□ -0.41
USP25-206ENST00000453553 CCDC61Q9Y6R9 512 aa12.52□□□□□ -0.41
USP25-206ENST00000453553 SLC39A7Q92504 469 aa12.51□□□□□ -0.41
USP25-206ENST00000453553 CIZ1Q9ULV3 898 aaPredicted RBP12.51□□□□□ -0.41
USP25-206ENST00000453553 C7P10643 843 aa12.5□□□□□ -0.41
USP25-206ENST00000453553 POTEGQ6S5H5 508 aa12.48□□□□□ -0.41
USP25-206ENST00000453553 ATN1P54259 1190 aaPredicted RBP12.47□□□□□ -0.41
USP25-206ENST00000453553 GSE1Q14687 1217 aa12.46□□□□□ -0.41
USP25-206ENST00000453553 DCAF8Q5TAQ9 597 aa12.46□□□□□ -0.41
USP25-206ENST00000453553 KIF12Q96FN5 646 aa12.46□□□□□ -0.41
USP25-206ENST00000453553 ECM2O94769 699 aaPredicted RBP12.45□□□□□ -0.42
USP25-206ENST00000453553 RASEFQ8IZ41 740 aa12.43□□□□□ -0.42
USP25-206ENST00000453553 TRPC6Q9Y210 931 aa12.43□□□□□ -0.42
USP25-206ENST00000453553 FAM212AQ96EL1 285 aa12.42□□□□□ -0.42
USP25-206ENST00000453553 POTEFA5A3E0 1075 aa12.4□□□□□ -0.42
USP25-206ENST00000453553 LCE2DQ5TA82 110 aaPredicted RBP12.39□□□□□ -0.43
USP25-206ENST00000453553 TRIM41Q8WV44 630 aa12.39□□□□□ -0.43
USP25-206ENST00000453553 BMP2KQ9NSY1 1161 aaPredicted RBP12.39□□□□□ -0.43
USP25-206ENST00000453553 MAP3K13O43283 966 aa12.37□□□□□ -0.43
USP25-206ENST00000453553 MAMSTRQ6ZN01 415 aa12.36□□□□□ -0.43
USP25-206ENST00000453553 RGL2O15211 777 aa12.31□□□□□ -0.44
USP25-206ENST00000453553 DCAF8L2P0C7V8 631 aa12.31□□□□□ -0.44
USP25-206ENST00000453553 TIE1P35590 1138 aa12.3□□□□□ -0.44
USP25-206ENST00000453553 CHRM1P11229 460 aaPredicted RBP12.29□□□□□ -0.44
USP25-206ENST00000453553 SCUBE2Q9NQ36 999 aa12.29□□□□□ -0.44
USP25-206ENST00000453553 FAM163AQ96GL9 167 aaPredicted RBP12.28□□□□□ -0.44
USP25-206ENST00000453553 PCDH10Q9P2E7 1040 aa12.27□□□□□ -0.45
USP25-206ENST00000453553 COLQQ9Y215 455 aaPredicted RBP12.27□□□□□ -0.45
USP25-206ENST00000453553 TTLL13PA6NNM8 815 aa12.26□□□□□ -0.45
USP25-206ENST00000453553 PYGBP11216 843 aa12.24□□□□□ -0.45
USP25-206ENST00000453553 RNF25Q96BH1 459 aaPredicted RBP12.21□□□□□ -0.45
USP25-206ENST00000453553 RIOK3O14730 519 aaKnown RBP12.17□□□□□ -0.46
USP25-206ENST00000453553 SEC24BO95487 1268 aa12.17□□□□□ -0.46
USP25-206ENST00000453553 TRIM35Q9UPQ4 493 aa12.17□□□□□ -0.46
USP25-206ENST00000453553 PCDHB13Q9Y5F0 798 aa12.17□□□□□ -0.46
USP25-206ENST00000453553 SGIP1Q9BQI5 828 aa12.16□□□□□ -0.46
USP25-206ENST00000453553 TAOK2Q9UL54 1235 aa12.14□□□□□ -0.47
USP25-206ENST00000453553 IFNL1Q8IU54 200 aa12.13□□□□□ -0.47
USP25-206ENST00000453553 IER5LQ5T953 404 aa12.12□□□□□ -0.47
USP25-206ENST00000453553 VGFO15240 615 aaPredicted RBP12.1□□□□□ -0.47
USP25-206ENST00000453553 CHGAP10645 457 aaKnown RBP12.1□□□□□ -0.47
USP25-206ENST00000453553 ZNF467Q7Z7K2 595 aaPredicted RBP12.09□□□□□ -0.47
USP25-206ENST00000453553 BBXQ8WY36 941 aaPredicted RBP12.07□□□□□ -0.48
USP25-206ENST00000453553 HS6ST3Q8IZP7 471 aa12.05□□□□□ -0.48
USP25-206ENST00000453553 TMEM106CQ9BVX2 250 aa12.05□□□□□ -0.48
USP25-206ENST00000453553 PCDHB8Q9UN66 801 aa12.05□□□□□ -0.48
USP25-206ENST00000453553 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.02□□□□□ -0.49
USP25-206ENST00000453553 SLAIN1Q8ND83 568 aa12.02□□□□□ -0.49
USP25-206ENST00000453553 ZFP91Q96JP5 570 aaPredicted RBP12.02□□□□□ -0.49
USP25-206ENST00000453553 CDAN1Q8IWY9 1227 aa12.01□□□□□ -0.49
USP25-206ENST00000453553 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.01□□□□□ -0.49
USP25-206ENST00000453553 STK25O00506 426 aa12□□□□□ -0.49
USP25-206ENST00000453553 IRX5P78411 483 aaPredicted RBP12□□□□□ -0.49
USP25-206ENST00000453553 ST18O60284 1047 aa11.99□□□□□ -0.49
USP25-206ENST00000453553 PDAP1Q13442 181 aaKnown RBP11.99□□□□□ -0.49
USP25-206ENST00000453553 PLCB2Q00722 1185 aa11.98□□□□□ -0.49
USP25-206ENST00000453553 DNAJC5Q9H3Z4 198 aa11.98□□□□□ -0.49
USP25-206ENST00000453553 SLC24A1O60721 1099 aa11.96□□□□□ -0.49
USP25-206ENST00000453553 PLCG2P16885 1265 aa11.96□□□□□ -0.49
USP25-206ENST00000453553 PSEN1P49768 467 aa11.96□□□□□ -0.49
USP25-206ENST00000453553 BCL11BQ9C0K0 894 aaPredicted RBP11.96□□□□□ -0.49
USP25-206ENST00000453553 STK24Q9Y6E0 443 aa11.96□□□□□ -0.49
USP25-206ENST00000453553 PAXIP1Q6ZW49 1069 aaPredicted RBP11.91□□□□□ -0.5
USP25-206ENST00000453553 SPRYD3Q8NCJ5 442 aa11.9□□□□□ -0.5
USP25-206ENST00000453553 CFAP44Q96MT7 982 aa11.89□□□□□ -0.51
USP25-206ENST00000453553 OCEL1Q9H607 264 aa11.89□□□□□ -0.51
USP25-206ENST00000453553 NKX1-1Q15270 411 aaPredicted RBP11.88□□□□□ -0.51
USP25-206ENST00000453553 GTPBP6O43824 516 aaPredicted RBP11.8□□□□□ -0.52
USP25-206ENST00000453553 HAP1P54257 671 aaPredicted RBP11.8□□□□□ -0.52
USP25-206ENST00000453553 CABP2Q9NPB3 220 aa11.8□□□□□ -0.52
USP25-206ENST00000453553 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.79□□□□□ -0.52
USP25-206ENST00000453553 PDCD7Q8N8D1 485 aaKnown RBP11.78□□□□□ -0.52
USP25-206ENST00000453553 EFCAB3Q8N7B9 438 aa11.77□□□□□ -0.53
USP25-206ENST00000453553 TMEM121BQ9BXQ6 578 aaPredicted RBP11.77□□□□□ -0.53
USP25-206ENST00000453553 MARVELD3Q96A59 401 aa11.76□□□□□ -0.53
USP25-206ENST00000453553 RYDENQ9NUL5 291 aaKnown RBP11.76□□□□□ -0.53
USP25-206ENST00000453553 SPNS2Q8IVW8 549 aa11.75□□□□□ -0.53
USP25-206ENST00000453553 SNPHO15079 494 aa11.74□□□□□ -0.53
USP25-206ENST00000453553 SOX12O15370 315 aa11.74□□□□□ -0.53
USP25-206ENST00000453553 MMRN1Q13201 1228 aa11.73□□□□□ -0.53
USP25-206ENST00000453553 GOLGA2Q08379 1002 aa11.72□□□□□ -0.53
USP25-206ENST00000453553 MFRPQ9BY79 579 aa11.72□□□□□ -0.53
USP25-206ENST00000453553 TSHZ2Q9NRE2 1034 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms