RNA–Protein interactions for RNA: ENST00000453257.1

TRGVB-201, Transcript of T cell receptor gamma variable B (pseudogene), humanhuman

BASIC

Gene TRGVB, Length 471 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRGVB-201ENST00000453257 MNX1P50219 401 aaPredicted RBP9.54□□□□□ -0.88
TRGVB-201ENST00000453257 CFAP44Q96MT7 982 aa9.53□□□□□ -0.88
TRGVB-201ENST00000453257 PAXIP1Q6ZW49 1069 aaPredicted RBP9.52□□□□□ -0.89
TRGVB-201ENST00000453257 RASEFQ8IZ41 740 aa9.52□□□□□ -0.89
TRGVB-201ENST00000453257 TAOK2Q9UL54 1235 aa9.49□□□□□ -0.89
TRGVB-201ENST00000453257 RIOK3O14730 519 aaKnown RBP9.47□□□□□ -0.89
TRGVB-201ENST00000453257 PRKAR2AP13861 404 aaKnown RBP9.47□□□□□ -0.89
TRGVB-201ENST00000453257 PYGBP11216 843 aa9.46□□□□□ -0.9
TRGVB-201ENST00000453257 RNF25Q96BH1 459 aaPredicted RBP9.46□□□□□ -0.9
TRGVB-201ENST00000453257 TSPYL2Q9H2G4 693 aaPredicted RBP9.46□□□□□ -0.9
TRGVB-201ENST00000453257 FARP1Q9Y4F1 1045 aaPredicted RBP9.45□□□□□ -0.9
TRGVB-201ENST00000453257 SPRYD3Q8NCJ5 442 aa9.44□□□□□ -0.9
TRGVB-201ENST00000453257 HS6ST3Q8IZP7 471 aa9.42□□□□□ -0.9
TRGVB-201ENST00000453257 STK25O00506 426 aa9.41□□□□□ -0.9
TRGVB-201ENST00000453257 CHRDL2Q6WN34 429 aa9.41□□□□□ -0.9
TRGVB-201ENST00000453257 VGFO15240 615 aaPredicted RBP9.4□□□□□ -0.9
TRGVB-201ENST00000453257 CHRM1P11229 460 aaPredicted RBP9.39□□□□□ -0.91
TRGVB-201ENST00000453257 PAK3O75914 559 aaPredicted RBP9.38□□□□□ -0.91
TRGVB-201ENST00000453257 FXR2P51116 673 aaKnown RBP eCLIP9.38□□□□□ -0.91
TRGVB-201ENST00000453257 STK24Q9Y6E0 443 aa9.36□□□□□ -0.91
TRGVB-201ENST00000453257 VSIG10Q8N0Z9 540 aa9.35□□□□□ -0.91
TRGVB-201ENST00000453257 PIP4P2Q8N4L2 257 aa9.35□□□□□ -0.91
TRGVB-201ENST00000453257 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.34□□□□□ -0.91
TRGVB-201ENST00000453257 ZFP91Q96JP5 570 aaPredicted RBP9.34□□□□□ -0.91
TRGVB-201ENST00000453257 BCL11BQ9C0K0 894 aaPredicted RBP9.33□□□□□ -0.92
TRGVB-201ENST00000453257 ZNF467Q7Z7K2 595 aaPredicted RBP9.31□□□□□ -0.92
TRGVB-201ENST00000453257 TSHZ2Q9NRE2 1034 aa9.3□□□□□ -0.92
TRGVB-201ENST00000453257 PCDHB8Q9UN66 801 aa9.28□□□□□ -0.92
TRGVB-201ENST00000453257 PCDHB13Q9Y5F0 798 aa9.28□□□□□ -0.92
TRGVB-201ENST00000453257 CCDC61Q9Y6R9 512 aa9.27□□□□□ -0.93
TRGVB-201ENST00000453257 NKX1-1Q15270 411 aaPredicted RBP9.26□□□□□ -0.93
TRGVB-201ENST00000453257 PDAP1Q13442 181 aaKnown RBP9.25□□□□□ -0.93
TRGVB-201ENST00000453257 SGIP1Q9BQI5 828 aa9.25□□□□□ -0.93
TRGVB-201ENST00000453257 DNAJC5Q9H3Z4 198 aa9.25□□□□□ -0.93
TRGVB-201ENST00000453257 ZRANB1Q9UGI0 708 aa9.24□□□□□ -0.93
TRGVB-201ENST00000453257 KDM2AQ9Y2K7 1162 aa9.24□□□□□ -0.93
TRGVB-201ENST00000453257 GTPBP6O43824 516 aaPredicted RBP9.22□□□□□ -0.93
TRGVB-201ENST00000453257 CD44P16070 742 aaKnown RBP9.22□□□□□ -0.93
TRGVB-201ENST00000453257 RYDENQ9NUL5 291 aaKnown RBP9.22□□□□□ -0.93
TRGVB-201ENST00000453257 PSEN1P49768 467 aa9.21□□□□□ -0.94
TRGVB-201ENST00000453257 ZNF579Q8NAF0 562 aaKnown RBP9.21□□□□□ -0.94
TRGVB-201ENST00000453257 BCANQ96GW7 911 aa9.21□□□□□ -0.94
TRGVB-201ENST00000453257 MAP3K13O43283 966 aa9.2□□□□□ -0.94
TRGVB-201ENST00000453257 IFNL1Q8IU54 200 aa9.18□□□□□ -0.94
TRGVB-201ENST00000453257 KIF12Q96FN5 646 aa9.17□□□□□ -0.94
TRGVB-201ENST00000453257 PHF12Q96QT6 1004 aa9.16□□□□□ -0.94
TRGVB-201ENST00000453257 CABP2Q9NPB3 220 aa9.13□□□□□ -0.95
TRGVB-201ENST00000453257 GOLGA2Q08379 1002 aa9.09□□□□□ -0.95
TRGVB-201ENST00000453257 SP7Q8TDD2 431 aaPredicted RBP9.09□□□□□ -0.95
TRGVB-201ENST00000453257 EFCAB3Q8N7B9 438 aa9.08□□□□□ -0.96
TRGVB-201ENST00000453257 NBR1Q14596 966 aa9.07□□□□□ -0.96
TRGVB-201ENST00000453257 MFRPQ9BY79 579 aa9.06□□□□□ -0.96
TRGVB-201ENST00000453257 C19orf67A6NJJ6 358 aa9.05□□□□□ -0.96
TRGVB-201ENST00000453257 MS4A3Q96HJ5 214 aa9.05□□□□□ -0.96
TRGVB-201ENST00000453257 TMEM106CQ9BVX2 250 aa9.05□□□□□ -0.96
TRGVB-201ENST00000453257 NLRP6P59044 892 aa9.04□□□□□ -0.96
TRGVB-201ENST00000453257 HAX1O00165 279 aa9.03□□□□□ -0.96
TRGVB-201ENST00000453257 PHF8Q9UPP1 1060 aa9.03□□□□□ -0.96
TRGVB-201ENST00000453257 SOX12O15370 315 aa9.02□□□□□ -0.97
TRGVB-201ENST00000453257 WDR70Q9NW82 654 aa9.01□□□□□ -0.97
TRGVB-201ENST00000453257 MKRN3Q13064 507 aaKnown RBP9□□□□□ -0.97
TRGVB-201ENST00000453257 TRPC6Q9Y210 931 aa8.99□□□□□ -0.97
TRGVB-201ENST00000453257 PPP1R37O75864 691 aa8.97□□□□□ -0.97
TRGVB-201ENST00000453257 FBXO22Q8NEZ5 403 aa8.97□□□□□ -0.97
TRGVB-201ENST00000453257 CADPS2Q86UW7 1296 aa8.96□□□□□ -0.98
TRGVB-201ENST00000453257 PRKCSHP14314 528 aaPredicted RBP8.94□□□□□ -0.98
TRGVB-201ENST00000453257 TIE1P35590 1138 aa8.93□□□□□ -0.98
TRGVB-201ENST00000453257 TPRNQ4KMQ1 711 aa8.93□□□□□ -0.98
TRGVB-201ENST00000453257 P3H3Q8IVL6 736 aa8.93□□□□□ -0.98
TRGVB-201ENST00000453257 TTLL13PA6NNM8 815 aa8.92□□□□□ -0.98
TRGVB-201ENST00000453257 GALR2O43603 387 aaPredicted RBP8.92□□□□□ -0.98
TRGVB-201ENST00000453257 BMP2KQ9NSY1 1161 aaPredicted RBP8.9□□□□□ -0.98
TRGVB-201ENST00000453257 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.9□□□□□ -0.98
TRGVB-201ENST00000453257 MS4A4AQ96JQ5 239 aa8.89□□□□□ -0.99
TRGVB-201ENST00000453257 TRIM35Q9UPQ4 493 aa8.89□□□□□ -0.99
TRGVB-201ENST00000453257 EVX2Q03828 476 aa8.88□□□□□ -0.99
TRGVB-201ENST00000453257 CLCN6P51797 869 aa8.86□□□□□ -0.99
TRGVB-201ENST00000453257 KCNV2Q8TDN2 545 aa8.85□□□□□ -0.99
TRGVB-201ENST00000453257 LARP6Q9BRS8 491 aaKnown RBP8.84□□□□□ -0.99
TRGVB-201ENST00000453257 PDE4AP27815 886 aa8.83□□□□□ -1
TRGVB-201ENST00000453257 ATN1P54259 1190 aaPredicted RBP8.81□□□□□ -1
TRGVB-201ENST00000453257 E2F4Q16254 413 aa8.81□□□□□ -1
TRGVB-201ENST00000453257 G3V3G9 751 aa8.8□□□□□ -1
TRGVB-201ENST00000453257 NCKAP5LQ9HCH0 1330 aa8.8□□□□□ -1
TRGVB-201ENST00000453257 DDX27Q96GQ7 796 aaKnown RBP8.79□□□□□ -1
TRGVB-201ENST00000453257 ATMINO43313 823 aaPredicted RBP8.78□□□□□ -1
TRGVB-201ENST00000453257 DPY19L2Q6NUT2 758 aa8.78□□□□□ -1
TRGVB-201ENST00000453257 DCBLD2Q96PD2 775 aa8.78□□□□□ -1
TRGVB-201ENST00000453257 TULP1O00294 542 aaPredicted RBP8.77□□□□□ -1.01
TRGVB-201ENST00000453257 GABBR2O75899 941 aa8.76□□□□□ -1.01
TRGVB-201ENST00000453257 PLCG2P16885 1265 aa8.76□□□□□ -1.01
TRGVB-201ENST00000453257 ARHGEF1Q92888 912 aaKnown RBP8.75□□□□□ -1.01
TRGVB-201ENST00000453257 CRISPLD2Q9H0B8 497 aa8.75□□□□□ -1.01
TRGVB-201ENST00000453257 ASTLQ6HA08 431 aaPredicted RBP8.74□□□□□ -1.01
TRGVB-201ENST00000453257 OCEL1Q9H607 264 aa8.74□□□□□ -1.01
TRGVB-201ENST00000453257 SEC24BO95487 1268 aa8.73□□□□□ -1.01
TRGVB-201ENST00000453257 IER5LQ5T953 404 aa8.73□□□□□ -1.01
TRGVB-201ENST00000453257 ILDR1Q86SU0 546 aaPredicted RBP8.73□□□□□ -1.01
TRGVB-201ENST00000453257 MICALL2Q8IY33 904 aa8.73□□□□□ -1.01
TRGVB-201ENST00000453257 TMC2Q8TDI7 906 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms