RNA–Protein interactions for RNA: ENST00000452716.5

LINC01828-203, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5 BASIC

Gene LINC01828, Length 3,250 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-203ENST00000452716 RBM42Q9BTD8 480 aaKnown RBP6.77□□□□□ -1.33
LINC01828-203ENST00000452716 SPDYE1Q8NFV5 336 aaPredicted RBP6.76□□□□□ -1.33
LINC01828-203ENST00000452716 BBXQ8WY36 941 aaPredicted RBP6.76□□□□□ -1.33
LINC01828-203ENST00000452716 TMEM132AQ24JP5 1023 aa6.76□□□□□ -1.33
LINC01828-203ENST00000452716 PRR29P0C7W0 189 aa6.74□□□□□ -1.33
LINC01828-203ENST00000452716 AKT1S1Q96B36 256 aa6.74□□□□□ -1.33
LINC01828-203ENST00000452716 DCAF8Q5TAQ9 597 aa6.72□□□□□ -1.33
LINC01828-203ENST00000452716 HOMEZQ8IX15 550 aa6.72□□□□□ -1.33
LINC01828-203ENST00000452716 REM2Q8IYK8 340 aaPredicted RBP6.71□□□□□ -1.33
LINC01828-203ENST00000452716 SPRYD3Q8NCJ5 442 aa6.7□□□□□ -1.34
LINC01828-203ENST00000452716 RNF25Q96BH1 459 aaPredicted RBP6.7□□□□□ -1.34
LINC01828-203ENST00000452716 NUBP1P53384 320 aa6.69□□□□□ -1.34
LINC01828-203ENST00000452716 GSE1Q14687 1217 aa6.69□□□□□ -1.34
LINC01828-203ENST00000452716 CREBZFQ9NS37 354 aa6.68□□□□□ -1.34
LINC01828-203ENST00000452716 TRIM41Q8WV44 630 aa6.68□□□□□ -1.34
LINC01828-203ENST00000452716 FAM212AQ96EL1 285 aa6.67□□□□□ -1.34
LINC01828-203ENST00000452716 PITPNM1O00562 1244 aa6.65□□□□□ -1.34
LINC01828-203ENST00000452716 MNX1P50219 401 aaPredicted RBP6.65□□□□□ -1.35
LINC01828-203ENST00000452716 RASEFQ8IZ41 740 aa6.64□□□□□ -1.35
LINC01828-203ENST00000452716 SUPT5HO00267 1087 aaKnown RBP6.64□□□□□ -1.35
LINC01828-203ENST00000452716 PODXL2Q9NZ53 605 aa6.64□□□□□ -1.35
LINC01828-203ENST00000452716 HS6ST3Q8IZP7 471 aa6.63□□□□□ -1.35
LINC01828-203ENST00000452716 RIOK3O14730 519 aaKnown RBP6.63□□□□□ -1.35
LINC01828-203ENST00000452716 STK25O00506 426 aa6.62□□□□□ -1.35
LINC01828-203ENST00000452716 PYGBP11216 843 aa6.61□□□□□ -1.35
LINC01828-203ENST00000452716 C14orf37Q86TY3 774 aa6.61□□□□□ -1.35
LINC01828-203ENST00000452716 CHADLQ6NUI6 762 aa6.61□□□□□ -1.35
LINC01828-203ENST00000452716 DNAJC5Q9H3Z4 198 aa6.59□□□□□ -1.35
LINC01828-203ENST00000452716 NKX1-1Q15270 411 aaPredicted RBP6.58□□□□□ -1.36
LINC01828-203ENST00000452716 UBTFP17480 764 aaKnown RBP6.58□□□□□ -1.36
LINC01828-203ENST00000452716 TSPYL2Q9H2G4 693 aaPredicted RBP6.57□□□□□ -1.36
LINC01828-203ENST00000452716 VGFO15240 615 aaPredicted RBP6.56□□□□□ -1.36
LINC01828-203ENST00000452716 BCL11BQ9C0K0 894 aaPredicted RBP6.56□□□□□ -1.36
LINC01828-203ENST00000452716 STK24Q9Y6E0 443 aa6.56□□□□□ -1.36
LINC01828-203ENST00000452716 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.55□□□□□ -1.36
LINC01828-203ENST00000452716 ZFP91Q96JP5 570 aaPredicted RBP6.55□□□□□ -1.36
LINC01828-203ENST00000452716 TRIM26Q12899 539 aaPredicted RBP6.55□□□□□ -1.36
LINC01828-203ENST00000452716 HRCP23327 699 aa6.54□□□□□ -1.36
LINC01828-203ENST00000452716 NBR1Q14596 966 aa6.54□□□□□ -1.36
LINC01828-203ENST00000452716 GTPBP6O43824 516 aaPredicted RBP6.52□□□□□ -1.36
LINC01828-203ENST00000452716 CHRM1P11229 460 aaPredicted RBP6.51□□□□□ -1.37
LINC01828-203ENST00000452716 FARP1Q9Y4F1 1045 aaPredicted RBP6.51□□□□□ -1.37
LINC01828-203ENST00000452716 PRKAR2AP13861 404 aaKnown RBP6.5□□□□□ -1.37
LINC01828-203ENST00000452716 SHROOM4Q9ULL8 1493 aa6.49□□□□□ -1.37
LINC01828-203ENST00000452716 PCDHB8Q9UN66 801 aa6.48□□□□□ -1.37
LINC01828-203ENST00000452716 PCDHB13Q9Y5F0 798 aa6.48□□□□□ -1.37
LINC01828-203ENST00000452716 ZNF467Q7Z7K2 595 aaPredicted RBP6.46□□□□□ -1.38
LINC01828-203ENST00000452716 BRPF1P55201 1214 aaPredicted RBP6.44□□□□□ -1.38
LINC01828-203ENST00000452716 SGIP1Q9BQI5 828 aa6.44□□□□□ -1.38
LINC01828-203ENST00000452716 RYDENQ9NUL5 291 aaKnown RBP6.43□□□□□ -1.38
LINC01828-203ENST00000452716 CCDC61Q9Y6R9 512 aa6.43□□□□□ -1.38
LINC01828-203ENST00000452716 PDAP1Q13442 181 aaKnown RBP6.43□□□□□ -1.38
LINC01828-203ENST00000452716 PAK3O75914 559 aaPredicted RBP6.41□□□□□ -1.38
LINC01828-203ENST00000452716 CHRDL2Q6WN34 429 aa6.41□□□□□ -1.38
LINC01828-203ENST00000452716 PSEN1P49768 467 aa6.4□□□□□ -1.38
LINC01828-203ENST00000452716 FXR2P51116 673 aaKnown RBP eCLIP6.4□□□□□ -1.38
LINC01828-203ENST00000452716 NPM2Q86SE8 214 aaKnown RBP6.4□□□□□ -1.38
LINC01828-203ENST00000452716 ERICH6Q7L0X2 663 aa6.39□□□□□ -1.39
LINC01828-203ENST00000452716 IFNL1Q8IU54 200 aa6.39□□□□□ -1.39
LINC01828-203ENST00000452716 MAP3K13O43283 966 aa6.38□□□□□ -1.39
LINC01828-203ENST00000452716 RANGAP1P46060 587 aaPredicted RBP6.38□□□□□ -1.39
LINC01828-203ENST00000452716 PIP4P2Q8N4L2 257 aa6.38□□□□□ -1.39
LINC01828-203ENST00000452716 MYO15BQ96JP2 1530 aa6.37□□□□□ -1.39
LINC01828-203ENST00000452716 ZNF579Q8NAF0 562 aaKnown RBP6.37□□□□□ -1.39
LINC01828-203ENST00000452716 MFRPQ9BY79 579 aa6.37□□□□□ -1.39
LINC01828-203ENST00000452716 CABP2Q9NPB3 220 aa6.37□□□□□ -1.39
LINC01828-203ENST00000452716 CADPS2Q86UW7 1296 aa6.36□□□□□ -1.39
LINC01828-203ENST00000452716 EFCAB3Q8N7B9 438 aa6.34□□□□□ -1.39
LINC01828-203ENST00000452716 KIF12Q96FN5 646 aa6.34□□□□□ -1.39
LINC01828-203ENST00000452716 C1orf115Q9H7X2 142 aa6.34□□□□□ -1.39
LINC01828-203ENST00000452716 WDR70Q9NW82 654 aa6.34□□□□□ -1.39
LINC01828-203ENST00000452716 ZRANB1Q9UGI0 708 aa6.34□□□□□ -1.39
LINC01828-203ENST00000452716 CD44P16070 742 aaKnown RBP6.33□□□□□ -1.4
LINC01828-203ENST00000452716 PHF12Q96QT6 1004 aa6.33□□□□□ -1.4
LINC01828-203ENST00000452716 PPP1R37O75864 691 aa6.32□□□□□ -1.4
LINC01828-203ENST00000452716 PHF8Q9UPP1 1060 aa6.32□□□□□ -1.4
LINC01828-203ENST00000452716 P3H3Q8IVL6 736 aa6.31□□□□□ -1.4
LINC01828-203ENST00000452716 KCNV2Q8TDN2 545 aa6.31□□□□□ -1.4
LINC01828-203ENST00000452716 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.3□□□□□ -1.4
LINC01828-203ENST00000452716 PCGF6Q9BYE7 350 aa6.3□□□□□ -1.4
LINC01828-203ENST00000452716 PPARGC1BQ86YN6 1023 aaKnown RBP6.3□□□□□ -1.4
LINC01828-203ENST00000452716 NLRP6P59044 892 aa6.28□□□□□ -1.4
LINC01828-203ENST00000452716 GOLGA2Q08379 1002 aa6.28□□□□□ -1.4
LINC01828-203ENST00000452716 LMOD2Q6P5Q4 547 aa6.28□□□□□ -1.4
LINC01828-203ENST00000452716 FBXO22Q8NEZ5 403 aa6.28□□□□□ -1.4
LINC01828-203ENST00000452716 ZCCHC6Q5VYS8 1495 aaKnown RBP6.27□□□□□ -1.41
LINC01828-203ENST00000452716 LOC105371045A0A1W2PR82 267 aa6.27□□□□□ -1.41
LINC01828-203ENST00000452716 ARID3AQ99856 593 aa6.27□□□□□ -1.41
LINC01828-203ENST00000452716 TMEM106CQ9BVX2 250 aa6.26□□□□□ -1.41
LINC01828-203ENST00000452716 TRPC6Q9Y210 931 aa6.26□□□□□ -1.41
LINC01828-203ENST00000452716 SOX12O15370 315 aa6.26□□□□□ -1.41
LINC01828-203ENST00000452716 NECTIN2Q92692 538 aa6.25□□□□□ -1.41
LINC01828-203ENST00000452716 SLC24A3Q9HC58 644 aa6.25□□□□□ -1.41
LINC01828-203ENST00000452716 MS4A3Q96HJ5 214 aa6.24□□□□□ -1.41
LINC01828-203ENST00000452716 NEUROD2Q15784 382 aa6.24□□□□□ -1.41
LINC01828-203ENST00000452716 MS4A4AQ96JQ5 239 aa6.23□□□□□ -1.41
LINC01828-203ENST00000452716 ARID3CA6NKF2 412 aa6.22□□□□□ -1.41
LINC01828-203ENST00000452716 E2F4Q16254 413 aa6.22□□□□□ -1.41
LINC01828-203ENST00000452716 LARP6Q9BRS8 491 aaKnown RBP6.22□□□□□ -1.41
LINC01828-203ENST00000452716 MKRN3Q13064 507 aaKnown RBP6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms