RNA–Protein interactions for RNA: ENST00000452666.3

VPS8-212, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-212ENST00000452666 MNX1P50219 401 aaPredicted RBP13.06□□□□□ -0.32
VPS8-212ENST00000452666 MAMSTRQ6ZN01 415 aa13.06□□□□□ -0.32
VPS8-212ENST00000452666 ATMINO43313 823 aaPredicted RBP13.04□□□□□ -0.32
VPS8-212ENST00000452666 MS4A3Q96HJ5 214 aa13.04□□□□□ -0.32
VPS8-212ENST00000452666 CSRNP3Q8WYN3 585 aa13□□□□□ -0.33
VPS8-212ENST00000452666 POTEJP0CG39 1038 aa12.98□□□□□ -0.33
VPS8-212ENST00000452666 SCUBE2Q9NQ36 999 aa12.95□□□□□ -0.34
VPS8-212ENST00000452666 FAM163AQ96GL9 167 aaPredicted RBP12.91□□□□□ -0.34
VPS8-212ENST00000452666 ATN1P54259 1190 aaPredicted RBP12.88□□□□□ -0.35
VPS8-212ENST00000452666 LCE2DQ5TA82 110 aaPredicted RBP12.88□□□□□ -0.35
VPS8-212ENST00000452666 TSPYL2Q9H2G4 693 aaPredicted RBP12.88□□□□□ -0.35
VPS8-212ENST00000452666 CCDC61Q9Y6R9 512 aa12.84□□□□□ -0.35
VPS8-212ENST00000452666 KIF12Q96FN5 646 aa12.8□□□□□ -0.36
VPS8-212ENST00000452666 BMP2KQ9NSY1 1161 aaPredicted RBP12.78□□□□□ -0.36
VPS8-212ENST00000452666 POTEFA5A3E0 1075 aa12.76□□□□□ -0.37
VPS8-212ENST00000452666 TIE1P35590 1138 aa12.74□□□□□ -0.37
VPS8-212ENST00000452666 TRPC6Q9Y210 931 aa12.71□□□□□ -0.37
VPS8-212ENST00000452666 SEC24BO95487 1268 aa12.7□□□□□ -0.38
VPS8-212ENST00000452666 MAP3K13O43283 966 aa12.69□□□□□ -0.38
VPS8-212ENST00000452666 PLEKHG5O94827 1062 aa12.68□□□□□ -0.38
VPS8-212ENST00000452666 PROM2Q8N271 834 aa12.67□□□□□ -0.38
VPS8-212ENST00000452666 CDAN1Q8IWY9 1227 aa12.66□□□□□ -0.38
VPS8-212ENST00000452666 COLQQ9Y215 455 aaPredicted RBP12.64□□□□□ -0.39
VPS8-212ENST00000452666 TTLL13PA6NNM8 815 aa12.63□□□□□ -0.39
VPS8-212ENST00000452666 IER5LQ5T953 404 aa12.6□□□□□ -0.39
VPS8-212ENST00000452666 RASEFQ8IZ41 740 aa12.59□□□□□ -0.39
VPS8-212ENST00000452666 EHMT2Q96KQ7 1210 aa12.58□□□□□ -0.4
VPS8-212ENST00000452666 MIER1Q8N108 512 aa12.57□□□□□ -0.4
VPS8-212ENST00000452666 TRIM35Q9UPQ4 493 aa12.57□□□□□ -0.4
VPS8-212ENST00000452666 SGIP1Q9BQI5 828 aa12.55□□□□□ -0.4
VPS8-212ENST00000452666 SLAIN1Q8ND83 568 aa12.53□□□□□ -0.4
VPS8-212ENST00000452666 PCDHB13Q9Y5F0 798 aa12.52□□□□□ -0.41
VPS8-212ENST00000452666 ST18O60284 1047 aa12.51□□□□□ -0.41
VPS8-212ENST00000452666 PLCG2P16885 1265 aa12.44□□□□□ -0.42
VPS8-212ENST00000452666 PLCD3Q8N3E9 789 aa12.42□□□□□ -0.42
VPS8-212ENST00000452666 TMEM106CQ9BVX2 250 aa12.41□□□□□ -0.42
VPS8-212ENST00000452666 ZBTB47Q9UFB7 747 aaPredicted RBP12.41□□□□□ -0.42
VPS8-212ENST00000452666 IFNL1Q8IU54 200 aa12.4□□□□□ -0.42
VPS8-212ENST00000452666 TMEM121BQ9BXQ6 578 aaPredicted RBP12.39□□□□□ -0.43
VPS8-212ENST00000452666 MMRN1Q13201 1228 aa12.38□□□□□ -0.43
VPS8-212ENST00000452666 SPNS2Q8IVW8 549 aa12.36□□□□□ -0.43
VPS8-212ENST00000452666 NUBP1P53384 320 aa12.35□□□□□ -0.43
VPS8-212ENST00000452666 IRX5P78411 483 aaPredicted RBP12.35□□□□□ -0.43
VPS8-212ENST00000452666 SNPHO15079 494 aa12.34□□□□□ -0.43
VPS8-212ENST00000452666 FAM212AQ96EL1 285 aa12.34□□□□□ -0.43
VPS8-212ENST00000452666 OCEL1Q9H607 264 aa12.3□□□□□ -0.44
VPS8-212ENST00000452666 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.29□□□□□ -0.44
VPS8-212ENST00000452666 MARVELD3Q96A59 401 aa12.24□□□□□ -0.45
VPS8-212ENST00000452666 EMP3P54852 163 aa12.15□□□□□ -0.46
VPS8-212ENST00000452666 PYGBP11216 843 aa12.14□□□□□ -0.47
VPS8-212ENST00000452666 DCAF8Q5TAQ9 597 aa12.13□□□□□ -0.47
VPS8-212ENST00000452666 C3orf67Q6ZVT6 689 aa12.13□□□□□ -0.47
VPS8-212ENST00000452666 PCDHB8Q9UN66 801 aa12.1□□□□□ -0.47
VPS8-212ENST00000452666 L3MBTL3Q96JM7 780 aaPredicted RBP12.08□□□□□ -0.48
VPS8-212ENST00000452666 PDCD7Q8N8D1 485 aaKnown RBP12.07□□□□□ -0.48
VPS8-212ENST00000452666 HS3ST6Q96QI5 342 aa12.06□□□□□ -0.48
VPS8-212ENST00000452666 GOLGA2Q08379 1002 aa12.05□□□□□ -0.48
VPS8-212ENST00000452666 KRTAP3-3Q9BYR6 98 aa12.05□□□□□ -0.48
VPS8-212ENST00000452666 KRTAP3-2Q9BYR7 98 aa12.05□□□□□ -0.48
VPS8-212ENST00000452666 MKRN3Q13064 507 aaKnown RBP12.04□□□□□ -0.48
VPS8-212ENST00000452666 FAM205CA6NFA0 338 aa12.03□□□□□ -0.48
VPS8-212ENST00000452666 ZNF467Q7Z7K2 595 aaPredicted RBP12□□□□□ -0.49
VPS8-212ENST00000452666 POTEB3A0JP26 581 aa11.99□□□□□ -0.49
VPS8-212ENST00000452666 POTEBQ6S5H4 581 aa11.99□□□□□ -0.49
VPS8-212ENST00000452666 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.97□□□□□ -0.494e-7■□□□□ 8.9
VPS8-212ENST00000452666 GSE1Q14687 1217 aa11.92□□□□□ -0.5
VPS8-212ENST00000452666 PSEN1P49768 467 aa11.88□□□□□ -0.51
VPS8-212ENST00000452666 FKBP8Q14318 412 aa11.87□□□□□ -0.51
VPS8-212ENST00000452666 G3V3G9 751 aa11.86□□□□□ -0.51
VPS8-212ENST00000452666 FBXO3Q9UK99 471 aa11.86□□□□□ -0.51
VPS8-212ENST00000452666 CHRM1P11229 460 aaPredicted RBP11.85□□□□□ -0.51
VPS8-212ENST00000452666 ILDR1Q86SU0 546 aaPredicted RBP11.85□□□□□ -0.51
VPS8-212ENST00000452666 ZNF710Q8N1W2 664 aa11.83□□□□□ -0.52
VPS8-212ENST00000452666 HOXB3P14651 431 aaPredicted RBP11.82□□□□□ -0.52
VPS8-212ENST00000452666 HOXB1P14653 301 aaPredicted RBP11.81□□□□□ -0.52
VPS8-212ENST00000452666 DPY19L2Q6NUT2 758 aa11.81□□□□□ -0.52
VPS8-212ENST00000452666 KLHL34Q8N239 644 aa11.81□□□□□ -0.52
VPS8-212ENST00000452666 RNF166Q96A37 237 aaPredicted RBP11.81□□□□□ -0.52
VPS8-212ENST00000452666 BOLA1Q9Y3E2 137 aa11.81□□□□□ -0.52
VPS8-212ENST00000452666 ERBB3P21860 1342 aa11.8□□□□□ -0.52
VPS8-212ENST00000452666 PDAP1Q13442 181 aaKnown RBP11.78□□□□□ -0.52
VPS8-212ENST00000452666 DOK7Q18PE1 504 aa11.78□□□□□ -0.52
VPS8-212ENST00000452666 RIMBP2O15034 1052 aa11.74□□□□□ -0.53
VPS8-212ENST00000452666 CABP2Q9NPB3 220 aa11.74□□□□□ -0.53
VPS8-212ENST00000452666 MYT1LQ9UL68 1186 aa11.72□□□□□ -0.53
VPS8-212ENST00000452666 VARS2Q5ST30 1063 aaKnown RBP11.7□□□□□ -0.54
VPS8-212ENST00000452666 VASPP50552 380 aaPredicted RBP11.69□□□□□ -0.54
VPS8-212ENST00000452666 PTGER2P43116 358 aa11.64□□□□□ -0.55
VPS8-212ENST00000452666 ZNF687Q8N1G0 1237 aa11.63□□□□□ -0.55
VPS8-212ENST00000452666 ZSWIM6Q9HCJ5 1215 aa11.63□□□□□ -0.55
VPS8-212ENST00000452666 CIZ1Q9ULV3 898 aaPredicted RBP11.57□□□□□ -0.56
VPS8-212ENST00000452666 GPR153Q6NV75 609 aa11.53□□□□□ -0.56
VPS8-212ENST00000452666 EFCAB3Q8N7B9 438 aa11.52□□□□□ -0.57
VPS8-212ENST00000452666 SPOCK2Q92563 424 aa11.52□□□□□ -0.57
VPS8-212ENST00000452666 MICALL2Q8IY33 904 aa11.51□□□□□ -0.57
VPS8-212ENST00000452666 TMEM92Q6UXU6 159 aa11.5□□□□□ -0.57
VPS8-212ENST00000452666 ANKRD13DQ6ZTN6 518 aa11.49□□□□□ -0.57
VPS8-212ENST00000452666 ARSIQ5FYB1 569 aa11.44□□□□□ -0.58
VPS8-212ENST00000452666 LSM11P83369 360 aaKnown RBP eCLIP11.42□□□□□ -0.58
VPS8-212ENST00000452666 ZNF316A6NFI3 1004 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms