RNA–Protein interactions for RNA: ENST00000452382.1

PMS1-218, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-218ENST00000452382 CCDC61Q9Y6R9 512 aa11.9□□□□□ -0.5
PMS1-218ENST00000452382 CLCN6P51797 869 aa11.88□□□□□ -0.51
PMS1-218ENST00000452382 GALR2O43603 387 aaPredicted RBP11.87□□□□□ -0.51
PMS1-218ENST00000452382 KLHL34Q8N239 644 aa11.87□□□□□ -0.51
PMS1-218ENST00000452382 IFNLR1Q8IU57 520 aaPredicted RBP11.86□□□□□ -0.51
PMS1-218ENST00000452382 POTEIP0CG38 1075 aa11.81□□□□□ -0.52
PMS1-218ENST00000452382 FAM212AQ96EL1 285 aa11.81□□□□□ -0.52
PMS1-218ENST00000452382 MS4A3Q96HJ5 214 aa11.81□□□□□ -0.52
PMS1-218ENST00000452382 KIF12Q96FN5 646 aa11.79□□□□□ -0.52
PMS1-218ENST00000452382 MAP3K13O43283 966 aa11.75□□□□□ -0.53
PMS1-218ENST00000452382 DCAF8Q5TAQ9 597 aa11.75□□□□□ -0.53
PMS1-218ENST00000452382 DCBLD2Q96PD2 775 aa11.75□□□□□ -0.53
PMS1-218ENST00000452382 SPOCK2Q92563 424 aa11.73□□□□□ -0.53
PMS1-218ENST00000452382 TRPC6Q9Y210 931 aa11.69□□□□□ -0.54
PMS1-218ENST00000452382 PYGBP11216 843 aa11.68□□□□□ -0.54
PMS1-218ENST00000452382 PCDHB13Q9Y5F0 798 aa11.67□□□□□ -0.54
PMS1-218ENST00000452382 GSE1Q14687 1217 aa11.66□□□□□ -0.54
PMS1-218ENST00000452382 SGIP1Q9BQI5 828 aa11.64□□□□□ -0.55
PMS1-218ENST00000452382 ASTLQ6HA08 431 aaPredicted RBP11.63□□□□□ -0.55
PMS1-218ENST00000452382 IFNL1Q8IU54 200 aa11.63□□□□□ -0.55
PMS1-218ENST00000452382 ATMINO43313 823 aaPredicted RBP11.62□□□□□ -0.55
PMS1-218ENST00000452382 PELP1Q8IZL8 1130 aaKnown RBP11.62□□□□□ -0.55
PMS1-218ENST00000452382 CIZ1Q9ULV3 898 aaPredicted RBP11.61□□□□□ -0.55
PMS1-218ENST00000452382 BMP2KQ9NSY1 1161 aaPredicted RBP11.6□□□□□ -0.55
PMS1-218ENST00000452382 TIE1P35590 1138 aa11.58□□□□□ -0.56
PMS1-218ENST00000452382 ATN1P54259 1190 aaPredicted RBP11.57□□□□□ -0.56
PMS1-218ENST00000452382 PCDHB8Q9UN66 801 aa11.56□□□□□ -0.56
PMS1-218ENST00000452382 TTLL13PA6NNM8 815 aa11.55□□□□□ -0.56
PMS1-218ENST00000452382 CHRM1P11229 460 aaPredicted RBP11.54□□□□□ -0.56
PMS1-218ENST00000452382 TMEM106CQ9BVX2 250 aa11.49□□□□□ -0.57
PMS1-218ENST00000452382 METRNQ9UJH8 293 aa11.49□□□□□ -0.57
PMS1-218ENST00000452382 ZNF467Q7Z7K2 595 aaPredicted RBP11.48□□□□□ -0.57
PMS1-218ENST00000452382 SLC39A7Q92504 469 aa11.48□□□□□ -0.57
PMS1-218ENST00000452382 TRIM35Q9UPQ4 493 aa11.47□□□□□ -0.57
PMS1-218ENST00000452382 C7P10643 843 aa11.45□□□□□ -0.58
PMS1-218ENST00000452382 POTEB2H3BUK9 544 aa11.44□□□□□ -0.58
PMS1-218ENST00000452382 TRIM41Q8WV44 630 aa11.44□□□□□ -0.58
PMS1-218ENST00000452382 POTEFA5A3E0 1075 aa11.41□□□□□ -0.58
PMS1-218ENST00000452382 OTUD5Q96G74 571 aa11.4□□□□□ -0.58
PMS1-218ENST00000452382 PSEN1P49768 467 aa11.39□□□□□ -0.59
PMS1-218ENST00000452382 RNF25Q96BH1 459 aaPredicted RBP11.39□□□□□ -0.59
PMS1-218ENST00000452382 COLQQ9Y215 455 aaPredicted RBP11.37□□□□□ -0.59
PMS1-218ENST00000452382 PDAP1Q13442 181 aaKnown RBP11.36□□□□□ -0.59
PMS1-218ENST00000452382 IER5LQ5T953 404 aa11.36□□□□□ -0.59
PMS1-218ENST00000452382 POTEJP0CG39 1038 aa11.34□□□□□ -0.59
PMS1-218ENST00000452382 PKD2Q13563 968 aa11.34□□□□□ -0.59
PMS1-218ENST00000452382 SEC24BO95487 1268 aa11.32□□□□□ -0.6
PMS1-218ENST00000452382 AMER1Q5JTC6 1135 aaPredicted RBP11.32□□□□□ -0.6
PMS1-218ENST00000452382 RIOK3O14730 519 aaKnown RBP11.31□□□□□ -0.6
PMS1-218ENST00000452382 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
PMS1-218ENST00000452382 ECM2O94769 699 aaPredicted RBP11.3□□□□□ -0.6
PMS1-218ENST00000452382 IRX5P78411 483 aaPredicted RBP11.3□□□□□ -0.6
PMS1-218ENST00000452382 POTEMA6NI47 508 aa11.27□□□□□ -0.61
PMS1-218ENST00000452382 CABP2Q9NPB3 220 aa11.27□□□□□ -0.61
PMS1-218ENST00000452382 PLCG2P16885 1265 aa11.26□□□□□ -0.61
PMS1-218ENST00000452382 GOLGA2Q08379 1002 aa11.26□□□□□ -0.61
PMS1-218ENST00000452382 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.24□□□□□ -0.61
PMS1-218ENST00000452382 VGFO15240 615 aaPredicted RBP11.24□□□□□ -0.61
PMS1-218ENST00000452382 MKRN3Q13064 507 aaKnown RBP11.24□□□□□ -0.61
PMS1-218ENST00000452382 ZFP91Q96JP5 570 aaPredicted RBP11.24□□□□□ -0.61
PMS1-218ENST00000452382 RGL2O15211 777 aa11.23□□□□□ -0.61
PMS1-218ENST00000452382 OCEL1Q9H607 264 aa11.23□□□□□ -0.61
PMS1-218ENST00000452382 POTEGQ6S5H5 508 aa11.22□□□□□ -0.61
PMS1-218ENST00000452382 PDCD7Q8N8D1 485 aaKnown RBP11.21□□□□□ -0.61
PMS1-218ENST00000452382 MAMSTRQ6ZN01 415 aa11.18□□□□□ -0.62
PMS1-218ENST00000452382 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.18□□□□□ -0.622e-8■■■□□ 17.2
PMS1-218ENST00000452382 EFCAB3Q8N7B9 438 aa11.17□□□□□ -0.62
PMS1-218ENST00000452382 SCUBE2Q9NQ36 999 aa11.17□□□□□ -0.62
PMS1-218ENST00000452382 ILDR1Q86SU0 546 aaPredicted RBP11.16□□□□□ -0.62
PMS1-218ENST00000452382 BCL11BQ9C0K0 894 aaPredicted RBP11.14□□□□□ -0.63
PMS1-218ENST00000452382 PCDH10Q9P2E7 1040 aa11.13□□□□□ -0.63
PMS1-218ENST00000452382 TAOK2Q9UL54 1235 aa11.13□□□□□ -0.63
PMS1-218ENST00000452382 DPY19L2Q6NUT2 758 aa11.11□□□□□ -0.63
PMS1-218ENST00000452382 STK24Q9Y6E0 443 aa11.11□□□□□ -0.63
PMS1-218ENST00000452382 STK25O00506 426 aa11.1□□□□□ -0.63
PMS1-218ENST00000452382 PHF8Q9UPP1 1060 aa11.06□□□□□ -0.64
PMS1-218ENST00000452382 SOX12O15370 315 aa11.05□□□□□ -0.64
PMS1-218ENST00000452382 L3MBTL3Q96JM7 780 aaPredicted RBP11.04□□□□□ -0.64
PMS1-218ENST00000452382 MS4A4AQ96JQ5 239 aa11.04□□□□□ -0.64
PMS1-218ENST00000452382 SLAIN1Q8ND83 568 aa11.03□□□□□ -0.64
PMS1-218ENST00000452382 LCE2DQ5TA82 110 aaPredicted RBP11.02□□□□□ -0.65
PMS1-218ENST00000452382 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.01□□□□□ -0.65
PMS1-218ENST00000452382 C3orf67Q6ZVT6 689 aa11□□□□□ -0.65
PMS1-218ENST00000452382 FAM163AQ96GL9 167 aaPredicted RBP11□□□□□ -0.65
PMS1-218ENST00000452382 MFRPQ9BY79 579 aa11□□□□□ -0.65
PMS1-218ENST00000452382 BOLA1Q9Y3E2 137 aa11□□□□□ -0.65
PMS1-218ENST00000452382 FBXO22Q8NEZ5 403 aa10.99□□□□□ -0.65
PMS1-218ENST00000452382 HS6ST3Q8IZP7 471 aa10.97□□□□□ -0.65
PMS1-218ENST00000452382 NLRP6P59044 892 aa10.96□□□□□ -0.65
PMS1-218ENST00000452382 G3V3G9 751 aa10.95□□□□□ -0.66
PMS1-218ENST00000452382 CHGAP10645 457 aaKnown RBP10.95□□□□□ -0.66
PMS1-218ENST00000452382 TMEM121BQ9BXQ6 578 aaPredicted RBP10.95□□□□□ -0.66
PMS1-218ENST00000452382 MICALL2Q8IY33 904 aa10.93□□□□□ -0.66
PMS1-218ENST00000452382 DCAF8L2P0C7V8 631 aa10.87□□□□□ -0.67
PMS1-218ENST00000452382 NKX1-1Q15270 411 aaPredicted RBP10.86□□□□□ -0.67
PMS1-218ENST00000452382 TMEM92Q6UXU6 159 aa10.86□□□□□ -0.67
PMS1-218ENST00000452382 PPP1R37O75864 691 aa10.84□□□□□ -0.67
PMS1-218ENST00000452382 DNAJC5Q9H3Z4 198 aa10.84□□□□□ -0.67
PMS1-218ENST00000452382 ST18O60284 1047 aa10.82□□□□□ -0.68
PMS1-218ENST00000452382 SNPHO15079 494 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms