RNA–Protein interactions for RNA: ENST00000450623.6

LINC01440-202, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 2

Gene LINC01440, Length 667 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-202ENST00000450623 PRR29P0C7W0 189 aa12.49□□□□□ -0.41
LINC01440-202ENST00000450623 ZBTB47Q9UFB7 747 aaPredicted RBP12.48□□□□□ -0.41
LINC01440-202ENST00000450623 CREBZFQ9NS37 354 aa12.38□□□□□ -0.43
LINC01440-202ENST00000450623 PKD2Q13563 968 aa12.37□□□□□ -0.43
LINC01440-202ENST00000450623 LCE2DQ5TA82 110 aaPredicted RBP12.35□□□□□ -0.43
LINC01440-202ENST00000450623 FARP1Q9Y4F1 1045 aaPredicted RBP12.32□□□□□ -0.44
LINC01440-202ENST00000450623 MNX1P50219 401 aaPredicted RBP12.29□□□□□ -0.44
LINC01440-202ENST00000450623 ZNF579Q8NAF0 562 aaKnown RBP12.28□□□□□ -0.44
LINC01440-202ENST00000450623 FAM163AQ96GL9 167 aaPredicted RBP12.28□□□□□ -0.44
LINC01440-202ENST00000450623 GALR2O43603 387 aaPredicted RBP12.27□□□□□ -0.45
LINC01440-202ENST00000450623 ECM2O94769 699 aaPredicted RBP12.25□□□□□ -0.45
LINC01440-202ENST00000450623 NUBP1P53384 320 aa12.25□□□□□ -0.45
LINC01440-202ENST00000450623 CIZ1Q9ULV3 898 aaPredicted RBP12.25□□□□□ -0.45
LINC01440-202ENST00000450623 NPM1P06748 294 aaKnown RBP eCLIP12.21□□□□□ -0.45
LINC01440-202ENST00000450623 GSE1Q14687 1217 aa12.21□□□□□ -0.45
LINC01440-202ENST00000450623 ZRANB1Q9UGI0 708 aa12.21□□□□□ -0.45
LINC01440-202ENST00000450623 TRIM41Q8WV44 630 aa12.18□□□□□ -0.46
LINC01440-202ENST00000450623 DCAF8L2P0C7V8 631 aa12.17□□□□□ -0.46
LINC01440-202ENST00000450623 POTEJP0CG39 1038 aa12.17□□□□□ -0.46
LINC01440-202ENST00000450623 DCAF8Q5TAQ9 597 aa12.17□□□□□ -0.46
LINC01440-202ENST00000450623 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
LINC01440-202ENST00000450623 FAM212AQ96EL1 285 aa12.14□□□□□ -0.47
LINC01440-202ENST00000450623 CDAN1Q8IWY9 1227 aa12.13□□□□□ -0.47
LINC01440-202ENST00000450623 RASEFQ8IZ41 740 aa12.12□□□□□ -0.47
LINC01440-202ENST00000450623 RGL2O15211 777 aa12.11□□□□□ -0.47
LINC01440-202ENST00000450623 MAMSTRQ6ZN01 415 aa12.09□□□□□ -0.47
LINC01440-202ENST00000450623 METRNQ9UJH8 293 aa12.05□□□□□ -0.48
LINC01440-202ENST00000450623 SLC24A1O60721 1099 aa12.04□□□□□ -0.48
LINC01440-202ENST00000450623 CHRM1P11229 460 aaPredicted RBP12.02□□□□□ -0.49
LINC01440-202ENST00000450623 RNF25Q96BH1 459 aaPredicted RBP11.98□□□□□ -0.49
LINC01440-202ENST00000450623 TSPYL2Q9H2G4 693 aaPredicted RBP11.98□□□□□ -0.49
LINC01440-202ENST00000450623 SCUBE2Q9NQ36 999 aa11.97□□□□□ -0.49
LINC01440-202ENST00000450623 C7P10643 843 aa11.96□□□□□ -0.49
LINC01440-202ENST00000450623 MMRN1Q13201 1228 aa11.96□□□□□ -0.49
LINC01440-202ENST00000450623 PYGBP11216 843 aa11.95□□□□□ -0.5
LINC01440-202ENST00000450623 RIOK3O14730 519 aaKnown RBP11.94□□□□□ -0.5
LINC01440-202ENST00000450623 SLC39A7Q92504 469 aa11.94□□□□□ -0.5
LINC01440-202ENST00000450623 PHF12Q96QT6 1004 aa11.94□□□□□ -0.5
LINC01440-202ENST00000450623 TAOK2Q9UL54 1235 aa11.94□□□□□ -0.5
LINC01440-202ENST00000450623 BBXQ8WY36 941 aaPredicted RBP11.93□□□□□ -0.5
LINC01440-202ENST00000450623 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
LINC01440-202ENST00000450623 PLCB2Q00722 1185 aa11.92□□□□□ -0.5
LINC01440-202ENST00000450623 CHGAP10645 457 aaKnown RBP11.9□□□□□ -0.5
LINC01440-202ENST00000450623 ASTLQ6HA08 431 aaPredicted RBP11.89□□□□□ -0.51
LINC01440-202ENST00000450623 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.89□□□□□ -0.51
LINC01440-202ENST00000450623 CCDC61Q9Y6R9 512 aa11.89□□□□□ -0.51
LINC01440-202ENST00000450623 VGFO15240 615 aaPredicted RBP11.88□□□□□ -0.51
LINC01440-202ENST00000450623 HS6ST3Q8IZP7 471 aa11.87□□□□□ -0.51
LINC01440-202ENST00000450623 SPNS2Q8IVW8 549 aa11.86□□□□□ -0.51
LINC01440-202ENST00000450623 ATMINO43313 823 aaPredicted RBP11.85□□□□□ -0.51
LINC01440-202ENST00000450623 SGIP1Q9BQI5 828 aa11.84□□□□□ -0.51
LINC01440-202ENST00000450623 ZNF467Q7Z7K2 595 aaPredicted RBP11.82□□□□□ -0.52
LINC01440-202ENST00000450623 DNAJC5Q9H3Z4 198 aa11.8□□□□□ -0.52
LINC01440-202ENST00000450623 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.78□□□□□ -0.52
LINC01440-202ENST00000450623 STK25O00506 426 aa11.78□□□□□ -0.52
LINC01440-202ENST00000450623 ZFP91Q96JP5 570 aaPredicted RBP11.78□□□□□ -0.52
LINC01440-202ENST00000450623 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.53
LINC01440-202ENST00000450623 KIF12Q96FN5 646 aa11.76□□□□□ -0.53
LINC01440-202ENST00000450623 SPRYD3Q8NCJ5 442 aa11.75□□□□□ -0.53
LINC01440-202ENST00000450623 PCDHB8Q9UN66 801 aa11.75□□□□□ -0.53
LINC01440-202ENST00000450623 PCDHB13Q9Y5F0 798 aa11.75□□□□□ -0.53
LINC01440-202ENST00000450623 MAP3K13O43283 966 aa11.74□□□□□ -0.53
LINC01440-202ENST00000450623 MS4A3Q96HJ5 214 aa11.74□□□□□ -0.53
LINC01440-202ENST00000450623 CFAP44Q96MT7 982 aa11.74□□□□□ -0.53
LINC01440-202ENST00000450623 HAP1P54257 671 aaPredicted RBP11.73□□□□□ -0.53
LINC01440-202ENST00000450623 PDAP1Q13442 181 aaKnown RBP11.73□□□□□ -0.53
LINC01440-202ENST00000450623 BCL11BQ9C0K0 894 aaPredicted RBP11.73□□□□□ -0.53
LINC01440-202ENST00000450623 STK24Q9Y6E0 443 aa11.73□□□□□ -0.53
LINC01440-202ENST00000450623 POTEFA5A3E0 1075 aa11.7□□□□□ -0.54
LINC01440-202ENST00000450623 IFNL1Q8IU54 200 aa11.7□□□□□ -0.54
LINC01440-202ENST00000450623 ST18O60284 1047 aa11.68□□□□□ -0.54
LINC01440-202ENST00000450623 PSEN1P49768 467 aa11.68□□□□□ -0.54
LINC01440-202ENST00000450623 NKX1-1Q15270 411 aaPredicted RBP11.68□□□□□ -0.54
LINC01440-202ENST00000450623 ATN1P54259 1190 aaPredicted RBP11.67□□□□□ -0.54
LINC01440-202ENST00000450623 GTPBP6O43824 516 aaPredicted RBP11.61□□□□□ -0.55
LINC01440-202ENST00000450623 RYDENQ9NUL5 291 aaKnown RBP11.6□□□□□ -0.55
LINC01440-202ENST00000450623 VSIG10Q8N0Z9 540 aa11.59□□□□□ -0.55
LINC01440-202ENST00000450623 TSHZ2Q9NRE2 1034 aa11.55□□□□□ -0.56
LINC01440-202ENST00000450623 CABP2Q9NPB3 220 aa11.52□□□□□ -0.57
LINC01440-202ENST00000450623 TRPC6Q9Y210 931 aa11.5□□□□□ -0.57
LINC01440-202ENST00000450623 SOX12O15370 315 aa11.49□□□□□ -0.57
LINC01440-202ENST00000450623 EFCAB3Q8N7B9 438 aa11.49□□□□□ -0.57
LINC01440-202ENST00000450623 SLAIN1Q8ND83 568 aa11.49□□□□□ -0.57
LINC01440-202ENST00000450623 TMEM106CQ9BVX2 250 aa11.49□□□□□ -0.57
LINC01440-202ENST00000450623 TIE1P35590 1138 aa11.48□□□□□ -0.57
LINC01440-202ENST00000450623 MFRPQ9BY79 579 aa11.48□□□□□ -0.57
LINC01440-202ENST00000450623 COLQQ9Y215 455 aaPredicted RBP11.48□□□□□ -0.57
LINC01440-202ENST00000450623 KDM2AQ9Y2K7 1162 aa11.48□□□□□ -0.57
LINC01440-202ENST00000450623 BMP2KQ9NSY1 1161 aaPredicted RBP11.45□□□□□ -0.58
LINC01440-202ENST00000450623 SEC24BO95487 1268 aa11.44□□□□□ -0.58
LINC01440-202ENST00000450623 NLRP6P59044 892 aa11.44□□□□□ -0.58
LINC01440-202ENST00000450623 GOLGA2Q08379 1002 aa11.44□□□□□ -0.58
LINC01440-202ENST00000450623 TTLL13PA6NNM8 815 aa11.42□□□□□ -0.58
LINC01440-202ENST00000450623 FBXO22Q8NEZ5 403 aa11.42□□□□□ -0.58
LINC01440-202ENST00000450623 TMEM121BQ9BXQ6 578 aaPredicted RBP11.41□□□□□ -0.58
LINC01440-202ENST00000450623 PHF8Q9UPP1 1060 aa11.41□□□□□ -0.58
LINC01440-202ENST00000450623 MKRN3Q13064 507 aaKnown RBP11.39□□□□□ -0.59
LINC01440-202ENST00000450623 MARVELD3Q96A59 401 aa11.38□□□□□ -0.59
LINC01440-202ENST00000450623 PPP1R37O75864 691 aa11.34□□□□□ -0.59
LINC01440-202ENST00000450623 TRIM35Q9UPQ4 493 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms