RNA–Protein interactions for RNA: ENST00000450294.3

LINC01828-202, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5 BASIC

Gene LINC01828, Length 955 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-202ENST00000450294 CCDC61Q9Y6R9 512 aa14.94□□□□□ -0.02
LINC01828-202ENST00000450294 MS4A3Q96HJ5 214 aa14.92□□□□□ -0.02
LINC01828-202ENST00000450294 ASTLQ6HA08 431 aaPredicted RBP14.86□□□□□ -0.03
LINC01828-202ENST00000450294 SLC39A7Q92504 469 aa14.84□□□□□ -0.03
LINC01828-202ENST00000450294 RASEFQ8IZ41 740 aa14.83□□□□□ -0.04
LINC01828-202ENST00000450294 KIF12Q96FN5 646 aa14.83□□□□□ -0.04
LINC01828-202ENST00000450294 FAM212AQ96EL1 285 aa14.82□□□□□ -0.04
LINC01828-202ENST00000450294 C7P10643 843 aa14.81□□□□□ -0.04
LINC01828-202ENST00000450294 SGIP1Q9BQI5 828 aa14.8□□□□□ -0.04
LINC01828-202ENST00000450294 ATMINO43313 823 aaPredicted RBP14.79□□□□□ -0.04
LINC01828-202ENST00000450294 METRNQ9UJH8 293 aa14.76□□□□□ -0.05
LINC01828-202ENST00000450294 TIE1P35590 1138 aa14.75□□□□□ -0.05
LINC01828-202ENST00000450294 MAP3K13O43283 966 aa14.73□□□□□ -0.05
LINC01828-202ENST00000450294 NUBP1P53384 320 aa14.73□□□□□ -0.05
LINC01828-202ENST00000450294 MAMSTRQ6ZN01 415 aa14.7□□□□□ -0.06
LINC01828-202ENST00000450294 PELP1Q8IZL8 1130 aaKnown RBP14.69□□□□□ -0.06
LINC01828-202ENST00000450294 PCDHB13Q9Y5F0 798 aa14.68□□□□□ -0.06
LINC01828-202ENST00000450294 ATN1P54259 1190 aaPredicted RBP14.65□□□□□ -0.06
LINC01828-202ENST00000450294 BMP2KQ9NSY1 1161 aaPredicted RBP14.65□□□□□ -0.06
LINC01828-202ENST00000450294 VASPP50552 380 aaPredicted RBP14.6□□□□□ -0.07
LINC01828-202ENST00000450294 DCAF8Q5TAQ9 597 aa14.6□□□□□ -0.07
LINC01828-202ENST00000450294 KLHL34Q8N239 644 aa14.6□□□□□ -0.07
LINC01828-202ENST00000450294 OTUD5Q96G74 571 aa14.6□□□□□ -0.07
LINC01828-202ENST00000450294 SCUBE2Q9NQ36 999 aa14.59□□□□□ -0.07
LINC01828-202ENST00000450294 TTLL13PA6NNM8 815 aa14.57□□□□□ -0.08
LINC01828-202ENST00000450294 POTEB2H3BUK9 544 aa14.57□□□□□ -0.08
LINC01828-202ENST00000450294 IER5LQ5T953 404 aa14.57□□□□□ -0.08
LINC01828-202ENST00000450294 GSE1Q14687 1217 aa14.56□□□□□ -0.08
LINC01828-202ENST00000450294 SEC24BO95487 1268 aa14.55□□□□□ -0.08
LINC01828-202ENST00000450294 TRPC6Q9Y210 931 aa14.53□□□□□ -0.08
LINC01828-202ENST00000450294 IFNL1Q8IU54 200 aa14.51□□□□□ -0.09
LINC01828-202ENST00000450294 TRIM35Q9UPQ4 493 aa14.5□□□□□ -0.09
LINC01828-202ENST00000450294 TMEM106CQ9BVX2 250 aa14.47□□□□□ -0.09
LINC01828-202ENST00000450294 PYGBP11216 843 aa14.44□□□□□ -0.1
LINC01828-202ENST00000450294 ZNF467Q7Z7K2 595 aaPredicted RBP14.43□□□□□ -0.1
LINC01828-202ENST00000450294 PLCG2P16885 1265 aa14.39□□□□□ -0.11
LINC01828-202ENST00000450294 SPOCK2Q92563 424 aa14.36□□□□□ -0.11
LINC01828-202ENST00000450294 POTEFA5A3E0 1075 aa14.35□□□□□ -0.11
LINC01828-202ENST00000450294 POTEJP0CG39 1038 aa14.35□□□□□ -0.11
LINC01828-202ENST00000450294 CHRM1P11229 460 aaPredicted RBP14.35□□□□□ -0.11
LINC01828-202ENST00000450294 COLQQ9Y215 455 aaPredicted RBP14.33□□□□□ -0.12
LINC01828-202ENST00000450294 GOLGA2Q08379 1002 aa14.31□□□□□ -0.12
LINC01828-202ENST00000450294 PCDHB8Q9UN66 801 aa14.29□□□□□ -0.12
LINC01828-202ENST00000450294 POTEMA6NI47 508 aa14.27□□□□□ -0.13
LINC01828-202ENST00000450294 OCEL1Q9H607 264 aa14.27□□□□□ -0.13
LINC01828-202ENST00000450294 IRX5P78411 483 aaPredicted RBP14.25□□□□□ -0.13
LINC01828-202ENST00000450294 PCDH10Q9P2E7 1040 aa14.25□□□□□ -0.13
LINC01828-202ENST00000450294 TRIM41Q8WV44 630 aa14.24□□□□□ -0.13
LINC01828-202ENST00000450294 MKRN3Q13064 507 aaKnown RBP14.23□□□□□ -0.13
LINC01828-202ENST00000450294 POTEGQ6S5H5 508 aa14.23□□□□□ -0.13
LINC01828-202ENST00000450294 IFNLR1Q8IU57 520 aaPredicted RBP14.23□□□□□ -0.13
LINC01828-202ENST00000450294 CIZ1Q9ULV3 898 aaPredicted RBP14.23□□□□□ -0.13
LINC01828-202ENST00000450294 PDAP1Q13442 181 aaKnown RBP14.18□□□□□ -0.14
LINC01828-202ENST00000450294 FAM163AQ96GL9 167 aaPredicted RBP14.18□□□□□ -0.14
LINC01828-202ENST00000450294 PSEN1P49768 467 aa14.17□□□□□ -0.14
LINC01828-202ENST00000450294 SLAIN1Q8ND83 568 aa14.17□□□□□ -0.14
LINC01828-202ENST00000450294 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.14□□□□□ -0.15
LINC01828-202ENST00000450294 L3MBTL3Q96JM7 780 aaPredicted RBP14.13□□□□□ -0.15
LINC01828-202ENST00000450294 PLSCR2Q9NRY7 297 aa14.13□□□□□ -0.15
LINC01828-202ENST00000450294 SNPHO15079 494 aa14.1□□□□□ -0.15
LINC01828-202ENST00000450294 C3orf67Q6ZVT6 689 aa14.08□□□□□ -0.16
LINC01828-202ENST00000450294 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.07□□□□□ -0.16
LINC01828-202ENST00000450294 G3V3G9 751 aa14.04□□□□□ -0.16
LINC01828-202ENST00000450294 PDCD7Q8N8D1 485 aaKnown RBP14.02□□□□□ -0.17
LINC01828-202ENST00000450294 LCE2DQ5TA82 110 aaPredicted RBP14□□□□□ -0.17
LINC01828-202ENST00000450294 TMEM121BQ9BXQ6 578 aaPredicted RBP13.99□□□□□ -0.17
LINC01828-202ENST00000450294 CABP2Q9NPB3 220 aa13.98□□□□□ -0.17
LINC01828-202ENST00000450294 TAOK2Q9UL54 1235 aa13.95□□□□□ -0.18
LINC01828-202ENST00000450294 ILDR1Q86SU0 546 aaPredicted RBP13.93□□□□□ -0.18
LINC01828-202ENST00000450294 ST18O60284 1047 aa13.92□□□□□ -0.18
LINC01828-202ENST00000450294 RIOK3O14730 519 aaKnown RBP13.88□□□□□ -0.19
LINC01828-202ENST00000450294 VGFO15240 615 aaPredicted RBP13.86□□□□□ -0.19
LINC01828-202ENST00000450294 BOLA1Q9Y3E2 137 aa13.86□□□□□ -0.19
LINC01828-202ENST00000450294 CDAN1Q8IWY9 1227 aa13.83□□□□□ -0.2
LINC01828-202ENST00000450294 SOX12O15370 315 aa13.8□□□□□ -0.2
LINC01828-202ENST00000450294 EFCAB3Q8N7B9 438 aa13.78□□□□□ -0.2
LINC01828-202ENST00000450294 DPY19L2Q6NUT2 758 aa13.74□□□□□ -0.21
LINC01828-202ENST00000450294 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.73□□□□□ -0.21
LINC01828-202ENST00000450294 ZFP91Q96JP5 570 aaPredicted RBP13.73□□□□□ -0.21
LINC01828-202ENST00000450294 EMP3P54852 163 aa13.7□□□□□ -0.22
LINC01828-202ENST00000450294 RNF25Q96BH1 459 aaPredicted RBP13.7□□□□□ -0.22
LINC01828-202ENST00000450294 RIMBP2O15034 1052 aa13.69□□□□□ -0.22
LINC01828-202ENST00000450294 DOK7Q18PE1 504 aa13.69□□□□□ -0.22
LINC01828-202ENST00000450294 ZNF710Q8N1W2 664 aa13.67□□□□□ -0.22
LINC01828-202ENST00000450294 MARVELD3Q96A59 401 aa13.66□□□□□ -0.22
LINC01828-202ENST00000450294 NLRP6P59044 892 aa13.65□□□□□ -0.22
LINC01828-202ENST00000450294 ECM2O94769 699 aaPredicted RBP13.63□□□□□ -0.23
LINC01828-202ENST00000450294 MICALL2Q8IY33 904 aa13.63□□□□□ -0.23
LINC01828-202ENST00000450294 BCL11BQ9C0K0 894 aaPredicted RBP13.6□□□□□ -0.23
LINC01828-202ENST00000450294 STK24Q9Y6E0 443 aa13.59□□□□□ -0.23
LINC01828-202ENST00000450294 PHF8Q9UPP1 1060 aa13.58□□□□□ -0.24
LINC01828-202ENST00000450294 STK25O00506 426 aa13.57□□□□□ -0.24
LINC01828-202ENST00000450294 ZSWIM6Q9HCJ5 1215 aa13.57□□□□□ -0.24
LINC01828-202ENST00000450294 FAM205CA6NFA0 338 aa13.54□□□□□ -0.24
LINC01828-202ENST00000450294 HOXB3P14651 431 aaPredicted RBP13.54□□□□□ -0.24
LINC01828-202ENST00000450294 HOXB1P14653 301 aaPredicted RBP13.54□□□□□ -0.24
LINC01828-202ENST00000450294 HS3ST6Q96QI5 342 aa13.54□□□□□ -0.24
LINC01828-202ENST00000450294 MS4A4AQ96JQ5 239 aa13.52□□□□□ -0.25
LINC01828-202ENST00000450294 ERBB3P21860 1342 aa13.47□□□□□ -0.25
LINC01828-202ENST00000450294 SPNS2Q8IVW8 549 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms