RNA–Protein interactions for RNA: ENST00000449858.2

GAPDHP17-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase pseudogene 17, humanhuman

BASIC

Gene GAPDHP17, Length 1,001 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP17-201ENST00000449858 POTEMA6NI47 508 aa10.82□□□□□ -0.68
GAPDHP17-201ENST00000449858 METRNQ9UJH8 293 aa10.82□□□□□ -0.68
GAPDHP17-201ENST00000449858 ATMINO43313 823 aaPredicted RBP10.8□□□□□ -0.68
GAPDHP17-201ENST00000449858 ASTLQ6HA08 431 aaPredicted RBP10.8□□□□□ -0.68
GAPDHP17-201ENST00000449858 TSPYL2Q9H2G4 693 aaPredicted RBP10.79□□□□□ -0.68
GAPDHP17-201ENST00000449858 POTEGQ6S5H5 508 aa10.78□□□□□ -0.68
GAPDHP17-201ENST00000449858 POTEJP0CG39 1038 aa10.77□□□□□ -0.69
GAPDHP17-201ENST00000449858 MIER1Q8N108 512 aa10.77□□□□□ -0.69
GAPDHP17-201ENST00000449858 SLC39A7Q92504 469 aa10.76□□□□□ -0.69
GAPDHP17-201ENST00000449858 PLCD3Q8N3E9 789 aa10.75□□□□□ -0.69
GAPDHP17-201ENST00000449858 PLEKHG5O94827 1062 aa10.74□□□□□ -0.69
GAPDHP17-201ENST00000449858 C7P10643 843 aa10.74□□□□□ -0.69
GAPDHP17-201ENST00000449858 VASPP50552 380 aaPredicted RBP10.72□□□□□ -0.69
GAPDHP17-201ENST00000449858 ATN1P54259 1190 aaPredicted RBP10.7□□□□□ -0.7
GAPDHP17-201ENST00000449858 CCDC61Q9Y6R9 512 aa10.7□□□□□ -0.7
GAPDHP17-201ENST00000449858 MAMSTRQ6ZN01 415 aa10.66□□□□□ -0.7
GAPDHP17-201ENST00000449858 KIF12Q96FN5 646 aa10.66□□□□□ -0.7
GAPDHP17-201ENST00000449858 TRPC6Q9Y210 931 aa10.66□□□□□ -0.7
GAPDHP17-201ENST00000449858 BMP2KQ9NSY1 1161 aaPredicted RBP10.63□□□□□ -0.71
GAPDHP17-201ENST00000449858 LCE2DQ5TA82 110 aaPredicted RBP10.62□□□□□ -0.71
GAPDHP17-201ENST00000449858 FAM163AQ96GL9 167 aaPredicted RBP10.62□□□□□ -0.71
GAPDHP17-201ENST00000449858 SCUBE2Q9NQ36 999 aa10.62□□□□□ -0.71
GAPDHP17-201ENST00000449858 ZBTB47Q9UFB7 747 aaPredicted RBP10.62□□□□□ -0.71
GAPDHP17-201ENST00000449858 POTEFA5A3E0 1075 aa10.61□□□□□ -0.71
GAPDHP17-201ENST00000449858 KLHL34Q8N239 644 aa10.61□□□□□ -0.71
GAPDHP17-201ENST00000449858 MAP3K13O43283 966 aa10.6□□□□□ -0.71
GAPDHP17-201ENST00000449858 RASEFQ8IZ41 740 aa10.59□□□□□ -0.71
GAPDHP17-201ENST00000449858 IFNLR1Q8IU57 520 aaPredicted RBP10.57□□□□□ -0.72
GAPDHP17-201ENST00000449858 PCDH10Q9P2E7 1040 aa10.57□□□□□ -0.72
GAPDHP17-201ENST00000449858 TIE1P35590 1138 aa10.55□□□□□ -0.72
GAPDHP17-201ENST00000449858 NUBP1P53384 320 aa10.55□□□□□ -0.72
GAPDHP17-201ENST00000449858 COLQQ9Y215 455 aaPredicted RBP10.53□□□□□ -0.72
GAPDHP17-201ENST00000449858 TTLL13PA6NNM8 815 aa10.51□□□□□ -0.73
GAPDHP17-201ENST00000449858 SEC24BO95487 1268 aa10.5□□□□□ -0.73
GAPDHP17-201ENST00000449858 SPOCK2Q92563 424 aa10.48□□□□□ -0.73
GAPDHP17-201ENST00000449858 TRIM35Q9UPQ4 493 aa10.45□□□□□ -0.74
GAPDHP17-201ENST00000449858 PCDHB13Q9Y5F0 798 aa10.45□□□□□ -0.74
GAPDHP17-201ENST00000449858 DCAF8Q5TAQ9 597 aa10.41□□□□□ -0.74
GAPDHP17-201ENST00000449858 FAM212AQ96EL1 285 aa10.41□□□□□ -0.74
GAPDHP17-201ENST00000449858 IER5LQ5T953 404 aa10.39□□□□□ -0.75
GAPDHP17-201ENST00000449858 IFNL1Q8IU54 200 aa10.39□□□□□ -0.75
GAPDHP17-201ENST00000449858 SGIP1Q9BQI5 828 aa10.39□□□□□ -0.75
GAPDHP17-201ENST00000449858 CDAN1Q8IWY9 1227 aa10.37□□□□□ -0.75
GAPDHP17-201ENST00000449858 GSE1Q14687 1217 aa10.36□□□□□ -0.75
GAPDHP17-201ENST00000449858 SLAIN1Q8ND83 568 aa10.36□□□□□ -0.75
GAPDHP17-201ENST00000449858 TMEM106CQ9BVX2 250 aa10.35□□□□□ -0.75
GAPDHP17-201ENST00000449858 CIZ1Q9ULV3 898 aaPredicted RBP10.35□□□□□ -0.75
GAPDHP17-201ENST00000449858 ST18O60284 1047 aa10.31□□□□□ -0.76
GAPDHP17-201ENST00000449858 PLCG2P16885 1265 aa10.31□□□□□ -0.76
GAPDHP17-201ENST00000449858 CHRM1P11229 460 aaPredicted RBP10.28□□□□□ -0.76
GAPDHP17-201ENST00000449858 IRX5P78411 483 aaPredicted RBP10.27□□□□□ -0.77
GAPDHP17-201ENST00000449858 PYGBP11216 843 aa10.25□□□□□ -0.77
GAPDHP17-201ENST00000449858 TRIM41Q8WV44 630 aa10.23□□□□□ -0.77
GAPDHP17-201ENST00000449858 OCEL1Q9H607 264 aa10.2□□□□□ -0.78
GAPDHP17-201ENST00000449858 PCDHB8Q9UN66 801 aa10.2□□□□□ -0.78
GAPDHP17-201ENST00000449858 PKD2Q13563 968 aa10.18□□□□□ -0.78
GAPDHP17-201ENST00000449858 ECM2O94769 699 aaPredicted RBP10.17□□□□□ -0.78
GAPDHP17-201ENST00000449858 AMER1Q5JTC6 1135 aaPredicted RBP10.17□□□□□ -0.78
GAPDHP17-201ENST00000449858 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.16□□□□□ -0.78
GAPDHP17-201ENST00000449858 ZNF467Q7Z7K2 595 aaPredicted RBP10.15□□□□□ -0.78
GAPDHP17-201ENST00000449858 MARVELD3Q96A59 401 aa10.15□□□□□ -0.78
GAPDHP17-201ENST00000449858 MMRN1Q13201 1228 aa10.12□□□□□ -0.79
GAPDHP17-201ENST00000449858 SPNS2Q8IVW8 549 aa10.12□□□□□ -0.79
GAPDHP17-201ENST00000449858 TMEM121BQ9BXQ6 578 aaPredicted RBP10.12□□□□□ -0.79
GAPDHP17-201ENST00000449858 SNPHO15079 494 aa10.11□□□□□ -0.79
GAPDHP17-201ENST00000449858 RTN4Q9NQC3 1192 aaKnown RBP10.11□□□□□ -0.79
GAPDHP17-201ENST00000449858 RNF25Q96BH1 459 aaPredicted RBP10.1□□□□□ -0.79
GAPDHP17-201ENST00000449858 PDCD7Q8N8D1 485 aaKnown RBP10.08□□□□□ -0.8
GAPDHP17-201ENST00000449858 RIOK3O14730 519 aaKnown RBP10.05□□□□□ -0.8
GAPDHP17-201ENST00000449858 C3orf67Q6ZVT6 689 aa10.05□□□□□ -0.8
GAPDHP17-201ENST00000449858 RGL2O15211 777 aa10.04□□□□□ -0.8
GAPDHP17-201ENST00000449858 PDAP1Q13442 181 aaKnown RBP10.04□□□□□ -0.8
GAPDHP17-201ENST00000449858 PSEN1P49768 467 aa10.03□□□□□ -0.8
GAPDHP17-201ENST00000449858 GOLGA2Q08379 1002 aa10.03□□□□□ -0.8
GAPDHP17-201ENST00000449858 MKRN3Q13064 507 aaKnown RBP10.03□□□□□ -0.8
GAPDHP17-201ENST00000449858 EMP3P54852 163 aa10.02□□□□□ -0.81
GAPDHP17-201ENST00000449858 TAOK2Q9UL54 1235 aa10.02□□□□□ -0.81
GAPDHP17-201ENST00000449858 L3MBTL3Q96JM7 780 aaPredicted RBP10.01□□□□□ -0.81
GAPDHP17-201ENST00000449858 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10□□□□□ -0.81
GAPDHP17-201ENST00000449858 VGFO15240 615 aaPredicted RBP9.99□□□□□ -0.81
GAPDHP17-201ENST00000449858 DCAF8L2P0C7V8 631 aa9.98□□□□□ -0.81
GAPDHP17-201ENST00000449858 POTEB3A0JP26 581 aa9.97□□□□□ -0.81
GAPDHP17-201ENST00000449858 POTEBQ6S5H4 581 aa9.97□□□□□ -0.81
GAPDHP17-201ENST00000449858 FAM205CA6NFA0 338 aa9.96□□□□□ -0.82
GAPDHP17-201ENST00000449858 HS3ST6Q96QI5 342 aa9.96□□□□□ -0.82
GAPDHP17-201ENST00000449858 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.94□□□□□ -0.82
GAPDHP17-201ENST00000449858 ZFP91Q96JP5 570 aaPredicted RBP9.94□□□□□ -0.82
GAPDHP17-201ENST00000449858 KRTAP3-3Q9BYR6 98 aa9.94□□□□□ -0.82
GAPDHP17-201ENST00000449858 KRTAP3-2Q9BYR7 98 aa9.94□□□□□ -0.82
GAPDHP17-201ENST00000449858 DPY19L2Q6NUT2 758 aa9.93□□□□□ -0.82
GAPDHP17-201ENST00000449858 STK25O00506 426 aa9.9□□□□□ -0.82
GAPDHP17-201ENST00000449858 ILDR1Q86SU0 546 aaPredicted RBP9.9□□□□□ -0.82
GAPDHP17-201ENST00000449858 CABP2Q9NPB3 220 aa9.89□□□□□ -0.83
GAPDHP17-201ENST00000449858 STK24Q9Y6E0 443 aa9.89□□□□□ -0.83
GAPDHP17-201ENST00000449858 BCL11BQ9C0K0 894 aaPredicted RBP9.88□□□□□ -0.83
GAPDHP17-201ENST00000449858 CHGAP10645 457 aaKnown RBP9.87□□□□□ -0.83
GAPDHP17-201ENST00000449858 BOLA1Q9Y3E2 137 aa9.85□□□□□ -0.83
GAPDHP17-201ENST00000449858 G3V3G9 751 aa9.84□□□□□ -0.83
GAPDHP17-201ENST00000449858 HOXB3P14651 431 aaPredicted RBP9.84□□□□□ -0.83
GAPDHP17-201ENST00000449858 EFCAB3Q8N7B9 438 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms