RNA–Protein interactions for RNA: ENST00000449557.6

SCN5A-207, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 5 BASIC

Gene SCN5A, Length 5,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-207ENST00000449557 WDR43Q15061 677 aaKnown RBP eCLIP15.7■□□□□ 0.1
SCN5A-207ENST00000449557 CFDP1Q9UEE9 299 aaPredicted RBP15.68■□□□□ 0.1
SCN5A-207ENST00000449557 RGL3Q3MIN7 710 aa15.67■□□□□ 0.1
SCN5A-207ENST00000449557 DDX10Q13206 875 aaKnown RBP15.66■□□□□ 0.1
SCN5A-207ENST00000449557 HNRNPUQ00839 825 aaKnown RBP eCLIP15.66■□□□□ 0.1
SCN5A-207ENST00000449557 RSF1Q96T23 1441 aaPredicted RBP15.64■□□□□ 0.1
SCN5A-207ENST00000449557 NACADO15069 1562 aa15.64■□□□□ 0.1
SCN5A-207ENST00000449557 FAM9BQ8IZU0 186 aa15.64■□□□□ 0.09
SCN5A-207ENST00000449557 NPHP1O15259 732 aa15.62■□□□□ 0.09
SCN5A-207ENST00000449557 MYO15BQ96JP2 1530 aa15.61■□□□□ 0.09
SCN5A-207ENST00000449557 HSP90AA1P07900 732 aaKnown RBP15.6■□□□□ 0.09
SCN5A-207ENST00000449557 POGKQ9P215 609 aa15.6■□□□□ 0.09
SCN5A-207ENST00000449557 PPM1GO15355 546 aaPredicted RBP15.59■□□□□ 0.09
SCN5A-207ENST00000449557 MIER1Q8N108 512 aa15.57■□□□□ 0.08
SCN5A-207ENST00000449557 CLIP1P30622 1438 aa15.57■□□□□ 0.08
SCN5A-207ENST00000449557 NBR1Q14596 966 aa15.56■□□□□ 0.08
SCN5A-207ENST00000449557 EIF5BO60841 1220 aaKnown RBP15.54■□□□□ 0.08
SCN5A-207ENST00000449557 KIF27Q86VH2 1401 aa15.54■□□□□ 0.08
SCN5A-207ENST00000449557 MYH16Q9H6N6 1097 aa15.53■□□□□ 0.08
SCN5A-207ENST00000449557 HDGFP51858 240 aaKnown RBP15.53■□□□□ 0.08
SCN5A-207ENST00000449557 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.52■□□□□ 0.08
SCN5A-207ENST00000449557 UPF2Q9HAU5 1272 aaKnown RBP15.51■□□□□ 0.07
SCN5A-207ENST00000449557 EIF4G1Q04637 1599 aaKnown RBP15.51■□□□□ 0.07
SCN5A-207ENST00000449557 WRNQ14191 1432 aaPredicted RBP eCLIP15.51■□□□□ 0.07
SCN5A-207ENST00000449557 IRX6P78412 446 aaPredicted RBP15.5■□□□□ 0.07
SCN5A-207ENST00000449557 CFAP53Q96M91 514 aa15.49■□□□□ 0.07
SCN5A-207ENST00000449557 CCDC136Q96JN2 1154 aa15.47■□□□□ 0.07
SCN5A-207ENST00000449557 AEBP2Q6ZN18 517 aaPredicted RBP15.46■□□□□ 0.07
SCN5A-207ENST00000449557 HIRIP3Q9BW71 556 aaPredicted RBP15.46■□□□□ 0.07
SCN5A-207ENST00000449557 CDCA8Q53HL2 280 aa15.45■□□□□ 0.06
SCN5A-207ENST00000449557 KANK1Q14678 1352 aa15.45■□□□□ 0.06
SCN5A-207ENST00000449557 MRS2Q9HD23 443 aa15.45■□□□□ 0.06
SCN5A-207ENST00000449557 GGT6Q6P531 493 aa15.44■□□□□ 0.06
SCN5A-207ENST00000449557 EIF4G2P78344 907 aaKnown RBP eCLIP15.44■□□□□ 0.06
SCN5A-207ENST00000449557 ANP32BQ92688 251 aaKnown RBP15.43■□□□□ 0.06
SCN5A-207ENST00000449557 CCNB3Q8WWL7 1395 aa15.42■□□□□ 0.06
SCN5A-207ENST00000449557 GOLGA3Q08378 1498 aa15.41■□□□□ 0.06
SCN5A-207ENST00000449557 KNSTRNQ9Y448 316 aa15.41■□□□□ 0.06
SCN5A-207ENST00000449557 PDS5BQ9NTI5 1447 aa15.4■□□□□ 0.06
SCN5A-207ENST00000449557 SOX12O15370 315 aa15.4■□□□□ 0.06
SCN5A-207ENST00000449557 LAS1LQ9Y4W2 734 aaKnown RBP15.38■□□□□ 0.05
SCN5A-207ENST00000449557 CARD11Q9BXL7 1154 aa15.38■□□□□ 0.05
SCN5A-207ENST00000449557 EEA1Q15075 1411 aa15.37■□□□□ 0.05
SCN5A-207ENST00000449557 CDK11BP21127 795 aaKnown RBP15.36■□□□□ 0.05
SCN5A-207ENST00000449557 CCDC9Q9Y3X0 531 aaKnown RBP15.36■□□□□ 0.05
SCN5A-207ENST00000449557 MAPK8IP3Q9UPT6 1336 aa15.36■□□□□ 0.05
SCN5A-207ENST00000449557 TNNT2P45379 298 aaPredicted RBP15.35■□□□□ 0.05
SCN5A-207ENST00000449557 CARMIL2Q6F5E8 1435 aa15.34■□□□□ 0.05
SCN5A-207ENST00000449557 CUX2O14529 1486 aa15.34■□□□□ 0.05
SCN5A-207ENST00000449557 CECR2Q9BXF3 1484 aa15.34■□□□□ 0.05
SCN5A-207ENST00000449557 NUDCQ9Y266 331 aa15.34■□□□□ 0.05
SCN5A-207ENST00000449557 SAFB2Q14151 953 aaKnown RBP eCLIP15.33■□□□□ 0.05
SCN5A-207ENST00000449557 CEP162Q5TB80 1403 aa15.32■□□□□ 0.04
SCN5A-207ENST00000449557 SRPK2P78362 688 aaKnown RBP15.32■□□□□ 0.04
SCN5A-207ENST00000449557 CARMIL1Q5VZK9 1371 aa15.31■□□□□ 0.04
SCN5A-207ENST00000449557 BAZ1AQ9NRL2 1556 aaPredicted RBP15.31■□□□□ 0.04
SCN5A-207ENST00000449557 NEUROD2Q15784 382 aa15.31■□□□□ 0.04
SCN5A-207ENST00000449557 PAK3O75914 559 aaPredicted RBP15.31■□□□□ 0.04
SCN5A-207ENST00000449557 TULP1O00294 542 aaPredicted RBP15.3■□□□□ 0.04
SCN5A-207ENST00000449557 STK26Q9P289 416 aa15.3■□□□□ 0.04
SCN5A-207ENST00000449557 CSB-PGBD3P0DP91 1061 aa15.29■□□□□ 0.04
SCN5A-207ENST00000449557 GOLGA2Q08379 1002 aa15.28■□□□□ 0.04
SCN5A-207ENST00000449557 U2SURPO15042 1029 aaKnown RBP15.27■□□□□ 0.04
SCN5A-207ENST00000449557 CEP164Q9UPV0 1460 aa15.26■□□□□ 0.03
SCN5A-207ENST00000449557 CYB5RLQ6IPT4 315 aa15.25■□□□□ 0.03
SCN5A-207ENST00000449557 GLIPR1L2Q4G1C9 344 aa15.25■□□□□ 0.03
SCN5A-207ENST00000449557 EFCAB2Q5VUJ9 269 aa15.24■□□□□ 0.03
SCN5A-207ENST00000449557 TDRD9Q8NDG6 1382 aaKnown RBP15.24■□□□□ 0.03
SCN5A-207ENST00000449557 EID1Q9Y6B2 187 aa15.24■□□□□ 0.03
SCN5A-207ENST00000449557 ANP32EQ9BTT0 268 aa15.23■□□□□ 0.03
SCN5A-207ENST00000449557 SOGA1O94964 1423 aa15.23■□□□□ 0.03
SCN5A-207ENST00000449557 SENP3-EIF4A1A0A087X0R7 540 aa15.23■□□□□ 0.03
SCN5A-207ENST00000449557 DCAF11Q8TEB1 546 aa15.22■□□□□ 0.03
SCN5A-207ENST00000449557 FTSJ3Q8IY81 847 aaKnown RBP15.22■□□□□ 0.03
SCN5A-207ENST00000449557 OS9Q13438 667 aaPredicted RBP15.22■□□□□ 0.03
SCN5A-207ENST00000449557 FHAD1B1AJZ9 1412 aa15.2■□□□□ 0.02
SCN5A-207ENST00000449557 DDRGK1Q96HY6 314 aa15.19■□□□□ 0.02
SCN5A-207ENST00000449557 SUPT16HQ9Y5B9 1047 aaKnown RBP15.19■□□□□ 0.02
SCN5A-207ENST00000449557 PNNQ9H307 717 aaKnown RBP15.19■□□□□ 0.02
SCN5A-207ENST00000449557 CC2D1BQ5T0F9 858 aaKnown RBP15.18■□□□□ 0.02
SCN5A-207ENST00000449557 TAOK2Q9UL54 1235 aa15.18■□□□□ 0.02
SCN5A-207ENST00000449557 ZNF330Q9Y3S2 320 aaPredicted RBP15.18■□□□□ 0.02
SCN5A-207ENST00000449557 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
SCN5A-207ENST00000449557 TMX4Q9H1E5 349 aaPredicted RBP15.17■□□□□ 0.02
SCN5A-207ENST00000449557 TMF1P82094 1093 aa15.17■□□□□ 0.02
SCN5A-207ENST00000449557 HDGFL2Q7Z4V5 671 aaPredicted RBP15.16■□□□□ 0.02
SCN5A-207ENST00000449557 CASC1Q6TDU7 716 aa15.15■□□□□ 0.02
SCN5A-207ENST00000449557 SMARCA2P51531 1590 aa15.15■□□□□ 0.02
SCN5A-207ENST00000449557 KIF3BO15066 747 aa15.15■□□□□ 0.02
SCN5A-207ENST00000449557 RTF1Q92541 710 aaKnown RBP15.14■□□□□ 0.01
SCN5A-207ENST00000449557 ISY1Q9ULR0 285 aaKnown RBP15.12■□□□□ 0.01
SCN5A-207ENST00000449557 TNIKQ9UKE5 1360 aa15.12■□□□□ 0.01
SCN5A-207ENST00000449557 BECN1Q14457 450 aa15.12■□□□□ 0.01
SCN5A-207ENST00000449557 MORC1Q86VD1 984 aa15.12■□□□□ 0.01
SCN5A-207ENST00000449557 WASHC2CQ9Y4E1 1318 aa15.11■□□□□ 0.01
SCN5A-207ENST00000449557 NCLP19338 710 aaKnown RBP15.09■□□□□ 0.01
SCN5A-207ENST00000449557 NUTM2DQ5VT03 806 aaPredicted RBP15.09■□□□□ 0.01
SCN5A-207ENST00000449557 FRAT1Q92837 279 aaPredicted RBP15.09■□□□□ 0.01
SCN5A-207ENST00000449557 SIN3AQ96ST3 1273 aa15.08■□□□□ 0
SCN5A-207ENST00000449557 MEX3CQ5U5Q3 659 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms