RNA–Protein interactions for RNA: ENST00000448879.5

SEMA3A-205, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-205ENST00000448879 CCDC61Q9Y6R9 512 aa14.75□□□□□ -0.05
SEMA3A-205ENST00000448879 MS4A3Q96HJ5 214 aa14.73□□□□□ -0.05
SEMA3A-205ENST00000448879 VASPP50552 380 aaPredicted RBP14.69□□□□□ -0.06
SEMA3A-205ENST00000448879 LHX8Q68G74 356 aa14.68□□□□□ -0.06
SEMA3A-205ENST00000448879 FAM212AQ96EL1 285 aa14.68□□□□□ -0.06
SEMA3A-205ENST00000448879 NUBP1P53384 320 aa14.67□□□□□ -0.06
SEMA3A-205ENST00000448879 KLHL34Q8N239 644 aa14.67□□□□□ -0.06
SEMA3A-205ENST00000448879 KIF12Q96FN5 646 aa14.66□□□□□ -0.06
SEMA3A-205ENST00000448879 MAP3K13O43283 966 aa14.61□□□□□ -0.07
SEMA3A-205ENST00000448879 DCAF8Q5TAQ9 597 aa14.59□□□□□ -0.07
SEMA3A-205ENST00000448879 PCDHB13Q9Y5F0 798 aa14.54□□□□□ -0.08
SEMA3A-205ENST00000448879 ATMINO43313 823 aaPredicted RBP14.53□□□□□ -0.08
SEMA3A-205ENST00000448879 ASTLQ6HA08 431 aaPredicted RBP14.53□□□□□ -0.08
SEMA3A-205ENST00000448879 PELP1Q8IZL8 1130 aaKnown RBP14.5□□□□□ -0.09
SEMA3A-205ENST00000448879 SGIP1Q9BQI5 828 aa14.48□□□□□ -0.09
SEMA3A-205ENST00000448879 TRPC6Q9Y210 931 aa14.48□□□□□ -0.09
SEMA3A-205ENST00000448879 ATN1P54259 1190 aaPredicted RBP14.46□□□□□ -0.09
SEMA3A-205ENST00000448879 SLC39A7Q92504 469 aa14.46□□□□□ -0.09
SEMA3A-205ENST00000448879 BMP2KQ9NSY1 1161 aaPredicted RBP14.46□□□□□ -0.09
SEMA3A-205ENST00000448879 METRNQ9UJH8 293 aa14.46□□□□□ -0.09
SEMA3A-205ENST00000448879 PYGBP11216 843 aa14.45□□□□□ -0.1
SEMA3A-205ENST00000448879 TIE1P35590 1138 aa14.45□□□□□ -0.1
SEMA3A-205ENST00000448879 GSE1Q14687 1217 aa14.44□□□□□ -0.1
SEMA3A-205ENST00000448879 C7P10643 843 aa14.43□□□□□ -0.1
SEMA3A-205ENST00000448879 IFNL1Q8IU54 200 aa14.41□□□□□ -0.1
SEMA3A-205ENST00000448879 IFNLR1Q8IU57 520 aaPredicted RBP14.4□□□□□ -0.1
SEMA3A-205ENST00000448879 SPOCK2Q92563 424 aa14.4□□□□□ -0.1
SEMA3A-205ENST00000448879 TTLL13PA6NNM8 815 aa14.38□□□□□ -0.11
SEMA3A-205ENST00000448879 TMEM106CQ9BVX2 250 aa14.33□□□□□ -0.12
SEMA3A-205ENST00000448879 CIZ1Q9ULV3 898 aaPredicted RBP14.33□□□□□ -0.12
SEMA3A-205ENST00000448879 POTEB2H3BUK9 544 aa14.32□□□□□ -0.12
SEMA3A-205ENST00000448879 TRIM35Q9UPQ4 493 aa14.31□□□□□ -0.12
SEMA3A-205ENST00000448879 PCDHB8Q9UN66 801 aa14.3□□□□□ -0.12
SEMA3A-205ENST00000448879 SEC24BO95487 1268 aa14.29□□□□□ -0.12
SEMA3A-205ENST00000448879 ZNF467Q7Z7K2 595 aaPredicted RBP14.25□□□□□ -0.13
SEMA3A-205ENST00000448879 OTUD5Q96G74 571 aa14.24□□□□□ -0.13
SEMA3A-205ENST00000448879 IER5LQ5T953 404 aa14.22□□□□□ -0.13
SEMA3A-205ENST00000448879 MAMSTRQ6ZN01 415 aa14.21□□□□□ -0.13
SEMA3A-205ENST00000448879 CHRM1P11229 460 aaPredicted RBP14.2□□□□□ -0.14
SEMA3A-205ENST00000448879 POTEFA5A3E0 1075 aa14.17□□□□□ -0.14
SEMA3A-205ENST00000448879 SCUBE2Q9NQ36 999 aa14.17□□□□□ -0.14
SEMA3A-205ENST00000448879 COLQQ9Y215 455 aaPredicted RBP14.17□□□□□ -0.14
SEMA3A-205ENST00000448879 PLCG2P16885 1265 aa14.15□□□□□ -0.14
SEMA3A-205ENST00000448879 POTEJP0CG39 1038 aa14.14□□□□□ -0.15
SEMA3A-205ENST00000448879 GOLGA2Q08379 1002 aa14.14□□□□□ -0.15
SEMA3A-205ENST00000448879 PSEN1P49768 467 aa14.1□□□□□ -0.15
SEMA3A-205ENST00000448879 TRIM41Q8WV44 630 aa14.08□□□□□ -0.16
SEMA3A-205ENST00000448879 PDAP1Q13442 181 aaKnown RBP14.07□□□□□ -0.16
SEMA3A-205ENST00000448879 MKRN3Q13064 507 aaKnown RBP14.06□□□□□ -0.16
SEMA3A-205ENST00000448879 IRX5P78411 483 aaPredicted RBP14.04□□□□□ -0.16
SEMA3A-205ENST00000448879 OCEL1Q9H607 264 aa14.03□□□□□ -0.16
SEMA3A-205ENST00000448879 CABP2Q9NPB3 220 aa13.96□□□□□ -0.17
SEMA3A-205ENST00000448879 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.94□□□□□ -0.18
SEMA3A-205ENST00000448879 SLAIN1Q8ND83 568 aa13.91□□□□□ -0.18
SEMA3A-205ENST00000448879 RIOK3O14730 519 aaKnown RBP13.89□□□□□ -0.19
SEMA3A-205ENST00000448879 FAM163AQ96GL9 167 aaPredicted RBP13.88□□□□□ -0.19
SEMA3A-205ENST00000448879 PDCD7Q8N8D1 485 aaKnown RBP13.87□□□□□ -0.19
SEMA3A-205ENST00000448879 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.85□□□□□ -0.19
SEMA3A-205ENST00000448879 L3MBTL3Q96JM7 780 aaPredicted RBP13.84□□□□□ -0.19
SEMA3A-205ENST00000448879 C3orf67Q6ZVT6 689 aa13.83□□□□□ -0.2
SEMA3A-205ENST00000448879 RNF25Q96BH1 459 aaPredicted RBP13.83□□□□□ -0.2
SEMA3A-205ENST00000448879 POTEMA6NI47 508 aa13.82□□□□□ -0.2
SEMA3A-205ENST00000448879 VGFO15240 615 aaPredicted RBP13.82□□□□□ -0.2
SEMA3A-205ENST00000448879 G3V3G9 751 aa13.81□□□□□ -0.2
SEMA3A-205ENST00000448879 ECM2O94769 699 aaPredicted RBP13.8□□□□□ -0.2
SEMA3A-205ENST00000448879 POTEGQ6S5H5 508 aa13.8□□□□□ -0.2
SEMA3A-205ENST00000448879 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.79□□□□□ -0.2
SEMA3A-205ENST00000448879 EFCAB3Q8N7B9 438 aa13.79□□□□□ -0.2
SEMA3A-205ENST00000448879 ZFP91Q96JP5 570 aaPredicted RBP13.79□□□□□ -0.2
SEMA3A-205ENST00000448879 TAOK2Q9UL54 1235 aa13.79□□□□□ -0.2
SEMA3A-205ENST00000448879 DPY19L2Q6NUT2 758 aa13.75□□□□□ -0.21
SEMA3A-205ENST00000448879 ILDR1Q86SU0 546 aaPredicted RBP13.72□□□□□ -0.21
SEMA3A-205ENST00000448879 BOLA1Q9Y3E2 137 aa13.71□□□□□ -0.21
SEMA3A-205ENST00000448879 LCE2DQ5TA82 110 aaPredicted RBP13.69□□□□□ -0.22
SEMA3A-205ENST00000448879 SNPHO15079 494 aa13.68□□□□□ -0.22
SEMA3A-205ENST00000448879 PKD2Q13563 968 aa13.67□□□□□ -0.22
SEMA3A-205ENST00000448879 BCL11BQ9C0K0 894 aaPredicted RBP13.67□□□□□ -0.22
SEMA3A-205ENST00000448879 STK24Q9Y6E0 443 aa13.67□□□□□ -0.22
SEMA3A-205ENST00000448879 SOX12O15370 315 aa13.66□□□□□ -0.22
SEMA3A-205ENST00000448879 STK25O00506 426 aa13.64□□□□□ -0.23
SEMA3A-205ENST00000448879 RGL2O15211 777 aa13.62□□□□□ -0.23
SEMA3A-205ENST00000448879 ST18O60284 1047 aa13.62□□□□□ -0.23
SEMA3A-205ENST00000448879 PLSCR2Q9NRY7 297 aa13.61□□□□□ -0.23
SEMA3A-205ENST00000448879 PHF8Q9UPP1 1060 aa13.61□□□□□ -0.23
SEMA3A-205ENST00000448879 NLRP6P59044 892 aa13.56□□□□□ -0.24
SEMA3A-205ENST00000448879 PCDH10Q9P2E7 1040 aa13.56□□□□□ -0.24
SEMA3A-205ENST00000448879 MS4A4AQ96JQ5 239 aa13.54□□□□□ -0.24
SEMA3A-205ENST00000448879 MICALL2Q8IY33 904 aa13.53□□□□□ -0.24
SEMA3A-205ENST00000448879 TMEM121BQ9BXQ6 578 aaPredicted RBP13.52□□□□□ -0.25
SEMA3A-205ENST00000448879 MARVELD3Q96A59 401 aa13.47□□□□□ -0.25
SEMA3A-205ENST00000448879 MFRPQ9BY79 579 aa13.46□□□□□ -0.25
SEMA3A-205ENST00000448879 CDAN1Q8IWY9 1227 aa13.45□□□□□ -0.26
SEMA3A-205ENST00000448879 FBXO22Q8NEZ5 403 aa13.45□□□□□ -0.26
SEMA3A-205ENST00000448879 ZNF710Q8N1W2 664 aa13.43□□□□□ -0.26
SEMA3A-205ENST00000448879 EMP3P54852 163 aa13.42□□□□□ -0.26
SEMA3A-205ENST00000448879 DOK7Q18PE1 504 aa13.41□□□□□ -0.26
SEMA3A-205ENST00000448879 TMEM92Q6UXU6 159 aa13.38□□□□□ -0.27
SEMA3A-205ENST00000448879 RIMBP2O15034 1052 aa13.37□□□□□ -0.27
SEMA3A-205ENST00000448879 HOXB3P14651 431 aaPredicted RBP13.37□□□□□ -0.27
SEMA3A-205ENST00000448879 CHGAP10645 457 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms