RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 NKX1-1Q15270 411 aaPredicted RBP13.15□□□□□ -0.3
COL11A1-205ENST00000447608 NUBP1P53384 320 aa13.14□□□□□ -0.31
COL11A1-205ENST00000447608 RIOK3O14730 519 aaKnown RBP13.11□□□□□ -0.31
COL11A1-205ENST00000447608 DCAF8Q5TAQ9 597 aa13.11□□□□□ -0.31
COL11A1-205ENST00000447608 GTPBP6O43824 516 aaPredicted RBP13.1□□□□□ -0.31
COL11A1-205ENST00000447608 STK25O00506 426 aa13.03□□□□□ -0.32
COL11A1-205ENST00000447608 VGFO15240 615 aaPredicted RBP12.99□□□□□ -0.33
COL11A1-205ENST00000447608 FAM212AQ96EL1 285 aa12.97□□□□□ -0.33
COL11A1-205ENST00000447608 CHRM1P11229 460 aaPredicted RBP12.93□□□□□ -0.34
COL11A1-205ENST00000447608 CREBZFQ9NS37 354 aa12.93□□□□□ -0.34
COL11A1-205ENST00000447608 SPDYE1Q8NFV5 336 aaPredicted RBP12.92□□□□□ -0.34
COL11A1-205ENST00000447608 MNX1P50219 401 aaPredicted RBP12.91□□□□□ -0.34
COL11A1-205ENST00000447608 BCL11BQ9C0K0 894 aaPredicted RBP12.91□□□□□ -0.34
COL11A1-205ENST00000447608 STK24Q9Y6E0 443 aa12.91□□□□□ -0.34
COL11A1-205ENST00000447608 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.9□□□□□ -0.34
COL11A1-205ENST00000447608 ZFP91Q96JP5 570 aaPredicted RBP12.9□□□□□ -0.34
COL11A1-205ENST00000447608 TIMELESSQ9UNS1 1208 aa12.9□□□□□ -0.34
COL11A1-205ENST00000447608 TULP1O00294 542 aaPredicted RBP12.89□□□□□ -0.35
COL11A1-205ENST00000447608 SGIP1Q9BQI5 828 aa12.89□□□□□ -0.35
COL11A1-205ENST00000447608 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
COL11A1-205ENST00000447608 CLEC11AQ9Y240 323 aa12.88□□□□□ -0.35
COL11A1-205ENST00000447608 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
COL11A1-205ENST00000447608 GTF3C3Q9Y5Q9 886 aa12.86□□□□□ -0.35
COL11A1-205ENST00000447608 RYDENQ9NUL5 291 aaKnown RBP12.85□□□□□ -0.35
COL11A1-205ENST00000447608 PYGBP11216 843 aa12.83□□□□□ -0.36
COL11A1-205ENST00000447608 AKT1S1Q96B36 256 aa12.8□□□□□ -0.36
COL11A1-205ENST00000447608 CACNB1Q02641 598 aaPredicted RBP12.79□□□□□ -0.36
COL11A1-205ENST00000447608 P3H3Q8IVL6 736 aa12.76□□□□□ -0.37
COL11A1-205ENST00000447608 TMEM132AQ24JP5 1023 aa12.73□□□□□ -0.37
COL11A1-205ENST00000447608 RBM42Q9BTD8 480 aaKnown RBP12.73□□□□□ -0.37
COL11A1-205ENST00000447608 REM2Q8IYK8 340 aaPredicted RBP12.72□□□□□ -0.37
COL11A1-205ENST00000447608 CADPS2Q86UW7 1296 aa12.71□□□□□ -0.37
COL11A1-205ENST00000447608 WDR70Q9NW82 654 aa12.7□□□□□ -0.38
COL11A1-205ENST00000447608 KCNV2Q8TDN2 545 aa12.69□□□□□ -0.38
COL11A1-205ENST00000447608 LMOD2Q6P5Q4 547 aa12.65□□□□□ -0.38
COL11A1-205ENST00000447608 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.65□□□□□ -0.38
COL11A1-205ENST00000447608 ERICH6Q7L0X2 663 aa12.63□□□□□ -0.39
COL11A1-205ENST00000447608 ZNF467Q7Z7K2 595 aaPredicted RBP12.6□□□□□ -0.39
COL11A1-205ENST00000447608 TSPYL2Q9H2G4 693 aaPredicted RBP12.58□□□□□ -0.4
COL11A1-205ENST00000447608 PITPNM1O00562 1244 aa12.57□□□□□ -0.4
COL11A1-205ENST00000447608 PDAP1Q13442 181 aaKnown RBP12.57□□□□□ -0.4
COL11A1-205ENST00000447608 PCDHB8Q9UN66 801 aa12.55□□□□□ -0.4
COL11A1-205ENST00000447608 PCDHB13Q9Y5F0 798 aa12.55□□□□□ -0.4
COL11A1-205ENST00000447608 MFRPQ9BY79 579 aa12.53□□□□□ -0.4
COL11A1-205ENST00000447608 CHADLQ6NUI6 762 aa12.5□□□□□ -0.41
COL11A1-205ENST00000447608 C14orf37Q86TY3 774 aa12.5□□□□□ -0.41
COL11A1-205ENST00000447608 PSEN1P49768 467 aa12.49□□□□□ -0.41
COL11A1-205ENST00000447608 BRPF1P55201 1214 aaPredicted RBP12.49□□□□□ -0.41
COL11A1-205ENST00000447608 ARXQ96QS3 562 aa12.49□□□□□ -0.41
COL11A1-205ENST00000447608 ARHGEF1Q92888 912 aaKnown RBP12.47□□□□□ -0.41
COL11A1-205ENST00000447608 PPP1R37O75864 691 aa12.46□□□□□ -0.41
COL11A1-205ENST00000447608 ZC3H15Q8WU90 426 aaKnown RBP12.45□□□□□ -0.42
COL11A1-205ENST00000447608 E2F4Q16254 413 aa12.43□□□□□ -0.42
COL11A1-205ENST00000447608 ZNF579Q8NAF0 562 aaKnown RBP12.43□□□□□ -0.42
COL11A1-205ENST00000447608 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
COL11A1-205ENST00000447608 SEMA3EO15041 775 aa12.41□□□□□ -0.42
COL11A1-205ENST00000447608 CCDC61Q9Y6R9 512 aa12.41□□□□□ -0.42
COL11A1-205ENST00000447608 TESPA1A2RU30 521 aaPredicted RBP12.38□□□□□ -0.43
COL11A1-205ENST00000447608 EFCAB3Q8N7B9 438 aa12.38□□□□□ -0.43
COL11A1-205ENST00000447608 FBXO22Q8NEZ5 403 aa12.38□□□□□ -0.43
COL11A1-205ENST00000447608 SLC24A3Q9HC58 644 aa12.38□□□□□ -0.43
COL11A1-205ENST00000447608 NLRP6P59044 892 aa12.37□□□□□ -0.43
COL11A1-205ENST00000447608 NEUROD2Q15784 382 aa12.37□□□□□ -0.43
COL11A1-205ENST00000447608 PHF8Q9UPP1 1060 aa12.35□□□□□ -0.43
COL11A1-205ENST00000447608 IFNL1Q8IU54 200 aa12.34□□□□□ -0.43
COL11A1-205ENST00000447608 CABP2Q9NPB3 220 aa12.34□□□□□ -0.43
COL11A1-205ENST00000447608 SOX12O15370 315 aa12.32□□□□□ -0.44
COL11A1-205ENST00000447608 NCKAP5LQ9HCH0 1330 aa12.29□□□□□ -0.44
COL11A1-205ENST00000447608 LARP6Q9BRS8 491 aaKnown RBP12.28□□□□□ -0.44
COL11A1-205ENST00000447608 MAP3K13O43283 966 aa12.27□□□□□ -0.45
COL11A1-205ENST00000447608 ZMYND10O75800 440 aa12.27□□□□□ -0.45
COL11A1-205ENST00000447608 HOMEZQ8IX15 550 aa12.27□□□□□ -0.45
COL11A1-205ENST00000447608 PRKAR2AP13861 404 aaKnown RBP12.26□□□□□ -0.45
COL11A1-205ENST00000447608 PDE4AP27815 886 aa12.24□□□□□ -0.45
COL11A1-205ENST00000447608 SMYD5Q6GMV2 418 aa12.24□□□□□ -0.45
COL11A1-205ENST00000447608 KIF12Q96FN5 646 aa12.24□□□□□ -0.45
COL11A1-205ENST00000447608 PAK3O75914 559 aaPredicted RBP12.21□□□□□ -0.45
COL11A1-205ENST00000447608 MFSD10Q14728 455 aa12.21□□□□□ -0.45
COL11A1-205ENST00000447608 DAXXQ9UER7 740 aaPredicted RBP12.21□□□□□ -0.45
COL11A1-205ENST00000447608 SUPT5HO00267 1087 aaKnown RBP12.19□□□□□ -0.46
COL11A1-205ENST00000447608 MS4A4AQ96JQ5 239 aa12.19□□□□□ -0.46
COL11A1-205ENST00000447608 CRISPLD2Q9H0B8 497 aa12.18□□□□□ -0.46
COL11A1-205ENST00000447608 ARIH1Q9Y4X5 557 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-205ENST00000447608 BARGINQ6ZT62 677 aa12.17□□□□□ -0.46
COL11A1-205ENST00000447608 DDX27Q96GQ7 796 aaKnown RBP12.17□□□□□ -0.46
COL11A1-205ENST00000447608 FXR2P51116 673 aaKnown RBP eCLIP12.13□□□□□ -0.47
COL11A1-205ENST00000447608 CAMK2BQ13554 666 aa12.12□□□□□ -0.47
COL11A1-205ENST00000447608 RBM26Q5T8P6 1007 aaKnown RBP12.11□□□□□ -0.47
COL11A1-205ENST00000447608 AK7Q96M32 723 aa12.1□□□□□ -0.47
COL11A1-205ENST00000447608 MLLT3P42568 568 aaPredicted RBP12.09□□□□□ -0.47
COL11A1-205ENST00000447608 GPBP1L1Q9HC44 474 aaPredicted RBP12.09□□□□□ -0.47
COL11A1-205ENST00000447608 GPIHBP1Q8IV16 184 aa12.07□□□□□ -0.48
COL11A1-205ENST00000447608 GOLGA2Q08379 1002 aa12.06□□□□□ -0.48
COL11A1-205ENST00000447608 KRI1Q8N9T8 703 aaKnown RBP12.06□□□□□ -0.48
COL11A1-205ENST00000447608 ZRANB1Q9UGI0 708 aa12.05□□□□□ -0.48
COL11A1-205ENST00000447608 IL27Q8NEV9 243 aa12.04□□□□□ -0.48
COL11A1-205ENST00000447608 PHF12Q96QT6 1004 aa12.03□□□□□ -0.48
COL11A1-205ENST00000447608 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
COL11A1-205ENST00000447608 PPP1R15BQ5SWA1 713 aa12□□□□□ -0.49
COL11A1-205ENST00000447608 MKRN3Q13064 507 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms