RNA–Protein interactions for RNA: ENST00000447421.5

CHEK2-218, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 900 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-218ENST00000447421 CD44P16070 742 aaKnown RBP11.83□□□□□ -0.52
CHEK2-218ENST00000447421 TRIM41Q8WV44 630 aa11.83□□□□□ -0.52
CHEK2-218ENST00000447421 HAX1O00165 279 aa11.79□□□□□ -0.52
CHEK2-218ENST00000447421 ZRANB1Q9UGI0 708 aa11.78□□□□□ -0.52
CHEK2-218ENST00000447421 C19orf67A6NJJ6 358 aa11.76□□□□□ -0.53
CHEK2-218ENST00000447421 PYGBP11216 843 aa11.75□□□□□ -0.53
CHEK2-218ENST00000447421 DCAF8L2P0C7V8 631 aa11.74□□□□□ -0.53
CHEK2-218ENST00000447421 CCDC61Q9Y6R9 512 aa11.74□□□□□ -0.53
CHEK2-218ENST00000447421 CHRM1P11229 460 aaPredicted RBP11.71□□□□□ -0.53
CHEK2-218ENST00000447421 RGL2O15211 777 aa11.69□□□□□ -0.54
CHEK2-218ENST00000447421 ZNF579Q8NAF0 562 aaKnown RBP11.65□□□□□ -0.54
CHEK2-218ENST00000447421 SP7Q8TDD2 431 aaPredicted RBP11.65□□□□□ -0.54
CHEK2-218ENST00000447421 PHF12Q96QT6 1004 aa11.65□□□□□ -0.54
CHEK2-218ENST00000447421 RIOK3O14730 519 aaKnown RBP11.63□□□□□ -0.55
CHEK2-218ENST00000447421 KIF12Q96FN5 646 aa11.63□□□□□ -0.55
CHEK2-218ENST00000447421 TAOK2Q9UL54 1235 aa11.62□□□□□ -0.55
CHEK2-218ENST00000447421 PCDHB13Q9Y5F0 798 aa11.62□□□□□ -0.55
CHEK2-218ENST00000447421 MAP3K13O43283 966 aa11.61□□□□□ -0.55
CHEK2-218ENST00000447421 EVX2Q03828 476 aa11.61□□□□□ -0.55
CHEK2-218ENST00000447421 ZNF467Q7Z7K2 595 aaPredicted RBP11.61□□□□□ -0.55
CHEK2-218ENST00000447421 RNF25Q96BH1 459 aaPredicted RBP11.61□□□□□ -0.55
CHEK2-218ENST00000447421 SGIP1Q9BQI5 828 aa11.59□□□□□ -0.55
CHEK2-218ENST00000447421 PCDHB8Q9UN66 801 aa11.57□□□□□ -0.56
CHEK2-218ENST00000447421 VGFO15240 615 aaPredicted RBP11.56□□□□□ -0.56
CHEK2-218ENST00000447421 IFNL1Q8IU54 200 aa11.55□□□□□ -0.56
CHEK2-218ENST00000447421 CLCN6P51797 869 aa11.53□□□□□ -0.56
CHEK2-218ENST00000447421 CHGAP10645 457 aaKnown RBP11.52□□□□□ -0.57
CHEK2-218ENST00000447421 MS4A3Q96HJ5 214 aa11.51□□□□□ -0.57
CHEK2-218ENST00000447421 PDAP1Q13442 181 aaKnown RBP11.5□□□□□ -0.57
CHEK2-218ENST00000447421 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.48□□□□□ -0.57
CHEK2-218ENST00000447421 STK25O00506 426 aa11.48□□□□□ -0.57
CHEK2-218ENST00000447421 PSEN1P49768 467 aa11.48□□□□□ -0.57
CHEK2-218ENST00000447421 ZFP91Q96JP5 570 aaPredicted RBP11.48□□□□□ -0.57
CHEK2-218ENST00000447421 GALR2O43603 387 aaPredicted RBP11.45□□□□□ -0.58
CHEK2-218ENST00000447421 HS6ST3Q8IZP7 471 aa11.44□□□□□ -0.58
CHEK2-218ENST00000447421 STK24Q9Y6E0 443 aa11.44□□□□□ -0.58
CHEK2-218ENST00000447421 GABBR2O75899 941 aa11.43□□□□□ -0.58
CHEK2-218ENST00000447421 BCL11BQ9C0K0 894 aaPredicted RBP11.43□□□□□ -0.58
CHEK2-218ENST00000447421 TRPC6Q9Y210 931 aa11.4□□□□□ -0.58
CHEK2-218ENST00000447421 BBXQ8WY36 941 aaPredicted RBP11.39□□□□□ -0.59
CHEK2-218ENST00000447421 TMEM106CQ9BVX2 250 aa11.39□□□□□ -0.59
CHEK2-218ENST00000447421 TIE1P35590 1138 aa11.37□□□□□ -0.59
CHEK2-218ENST00000447421 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.37□□□□□ -0.59
CHEK2-218ENST00000447421 GOLGA2Q08379 1002 aa11.35□□□□□ -0.59
CHEK2-218ENST00000447421 CABP2Q9NPB3 220 aa11.34□□□□□ -0.59
CHEK2-218ENST00000447421 TTLL13PA6NNM8 815 aa11.33□□□□□ -0.6
CHEK2-218ENST00000447421 DCBLD2Q96PD2 775 aa11.33□□□□□ -0.6
CHEK2-218ENST00000447421 BMP2KQ9NSY1 1161 aaPredicted RBP11.33□□□□□ -0.6
CHEK2-218ENST00000447421 DNAJC5Q9H3Z4 198 aa11.3□□□□□ -0.6
CHEK2-218ENST00000447421 ATMINO43313 823 aaPredicted RBP11.27□□□□□ -0.61
CHEK2-218ENST00000447421 MKRN3Q13064 507 aaKnown RBP11.27□□□□□ -0.61
CHEK2-218ENST00000447421 EFCAB3Q8N7B9 438 aa11.27□□□□□ -0.61
CHEK2-218ENST00000447421 TRIM35Q9UPQ4 493 aa11.27□□□□□ -0.61
CHEK2-218ENST00000447421 ATN1P54259 1190 aaPredicted RBP11.26□□□□□ -0.61
CHEK2-218ENST00000447421 ASTLQ6HA08 431 aaPredicted RBP11.26□□□□□ -0.61
CHEK2-218ENST00000447421 PAXIP1Q6ZW49 1069 aaPredicted RBP11.26□□□□□ -0.61
CHEK2-218ENST00000447421 NKX1-1Q15270 411 aaPredicted RBP11.25□□□□□ -0.61
CHEK2-218ENST00000447421 SPRYD3Q8NCJ5 442 aa11.25□□□□□ -0.61
CHEK2-218ENST00000447421 CFAP44Q96MT7 982 aa11.25□□□□□ -0.61
CHEK2-218ENST00000447421 SOX12O15370 315 aa11.23□□□□□ -0.61
CHEK2-218ENST00000447421 PLCB2Q00722 1185 aa11.23□□□□□ -0.61
CHEK2-218ENST00000447421 RYDENQ9NUL5 291 aaKnown RBP11.23□□□□□ -0.61
CHEK2-218ENST00000447421 NLRP6P59044 892 aa11.19□□□□□ -0.62
CHEK2-218ENST00000447421 MFRPQ9BY79 579 aa11.18□□□□□ -0.62
CHEK2-218ENST00000447421 GTPBP6O43824 516 aaPredicted RBP11.17□□□□□ -0.62
CHEK2-218ENST00000447421 PHF8Q9UPP1 1060 aa11.17□□□□□ -0.62
CHEK2-218ENST00000447421 IER5LQ5T953 404 aa11.16□□□□□ -0.62
CHEK2-218ENST00000447421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.16□□□□□ -0.622e-7■■□□□ 13.1
CHEK2-218ENST00000447421 POTEIP0CG38 1075 aa11.15□□□□□ -0.62
CHEK2-218ENST00000447421 PELP1Q8IZL8 1130 aaKnown RBP11.15□□□□□ -0.62
CHEK2-218ENST00000447421 SLC39A7Q92504 469 aa11.13□□□□□ -0.63
CHEK2-218ENST00000447421 SEC24BO95487 1268 aa11.12□□□□□ -0.63
CHEK2-218ENST00000447421 FBXO22Q8NEZ5 403 aa11.12□□□□□ -0.63
CHEK2-218ENST00000447421 C7P10643 843 aa11.11□□□□□ -0.63
CHEK2-218ENST00000447421 PLCG2P16885 1265 aa11.1□□□□□ -0.63
CHEK2-218ENST00000447421 HAP1P54257 671 aaPredicted RBP11.1□□□□□ -0.63
CHEK2-218ENST00000447421 OCEL1Q9H607 264 aa11.1□□□□□ -0.63
CHEK2-218ENST00000447421 IRX5P78411 483 aaPredicted RBP11.08□□□□□ -0.64
CHEK2-218ENST00000447421 METRNQ9UJH8 293 aa11.08□□□□□ -0.64
CHEK2-218ENST00000447421 SLC24A1O60721 1099 aa11.07□□□□□ -0.64
CHEK2-218ENST00000447421 MS4A4AQ96JQ5 239 aa11.07□□□□□ -0.64
CHEK2-218ENST00000447421 ILDR1Q86SU0 546 aaPredicted RBP11.06□□□□□ -0.64
CHEK2-218ENST00000447421 PPP1R37O75864 691 aa11.03□□□□□ -0.64
CHEK2-218ENST00000447421 PDCD7Q8N8D1 485 aaKnown RBP11.03□□□□□ -0.64
CHEK2-218ENST00000447421 COLQQ9Y215 455 aaPredicted RBP11.03□□□□□ -0.64
CHEK2-218ENST00000447421 G3V3G9 751 aa11.02□□□□□ -0.65
CHEK2-218ENST00000447421 DPY19L2Q6NUT2 758 aa11.02□□□□□ -0.65
CHEK2-218ENST00000447421 TSHZ2Q9NRE2 1034 aa11.01□□□□□ -0.65
CHEK2-218ENST00000447421 PLSCR2Q9NRY7 297 aa11□□□□□ -0.65
CHEK2-218ENST00000447421 L3MBTL3Q96JM7 780 aaPredicted RBP10.98□□□□□ -0.65
CHEK2-218ENST00000447421 POTEFA5A3E0 1075 aa10.96□□□□□ -0.65
CHEK2-218ENST00000447421 BOLA1Q9Y3E2 137 aa10.95□□□□□ -0.66
CHEK2-218ENST00000447421 LHX8Q68G74 356 aa10.94□□□□□ -0.66
CHEK2-218ENST00000447421 MICALL2Q8IY33 904 aa10.93□□□□□ -0.66
CHEK2-218ENST00000447421 VSIG10Q8N0Z9 540 aa10.91□□□□□ -0.66
CHEK2-218ENST00000447421 CADPS2Q86UW7 1296 aa10.88□□□□□ -0.67
CHEK2-218ENST00000447421 TMEM121BQ9BXQ6 578 aaPredicted RBP10.88□□□□□ -0.67
CHEK2-218ENST00000447421 C3orf67Q6ZVT6 689 aa10.87□□□□□ -0.67
CHEK2-218ENST00000447421 PDE4AP27815 886 aa10.83□□□□□ -0.68
CHEK2-218ENST00000447421 WDR70Q9NW82 654 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms