RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 RASEFQ8IZ41 740 aa18.83■□□□□ 0.6
SMARCE1-206ENST00000447024 PELP1Q8IZL8 1130 aaKnown RBP18.83■□□□□ 0.6
SMARCE1-206ENST00000447024 NISCHQ9Y2I1 1504 aa18.8■□□□□ 0.6
SMARCE1-206ENST00000447024 ASTLQ6HA08 431 aaPredicted RBP18.79■□□□□ 0.6
SMARCE1-206ENST00000447024 KIF12Q96FN5 646 aa18.78■□□□□ 0.6
SMARCE1-206ENST00000447024 ATMINO43313 823 aaPredicted RBP18.76■□□□□ 0.59
SMARCE1-206ENST00000447024 POTEB2H3BUK9 544 aa18.73■□□□□ 0.59
SMARCE1-206ENST00000447024 ZBTB47Q9UFB7 747 aaPredicted RBP18.7■□□□□ 0.58
SMARCE1-206ENST00000447024 MAP3K13O43283 966 aa18.68■□□□□ 0.58
SMARCE1-206ENST00000447024 METRNQ9UJH8 293 aa18.67■□□□□ 0.58
SMARCE1-206ENST00000447024 NUBP1P53384 320 aa18.65■□□□□ 0.58
SMARCE1-206ENST00000447024 SLC39A7Q92504 469 aa18.65■□□□□ 0.58
SMARCE1-206ENST00000447024 OTUD5Q96G74 571 aa18.65■□□□□ 0.58
SMARCE1-206ENST00000447024 TRPC6Q9Y210 931 aa18.64■□□□□ 0.57
SMARCE1-206ENST00000447024 ATN1P54259 1190 aaPredicted RBP18.63■□□□□ 0.57
SMARCE1-206ENST00000447024 C7P10643 843 aa18.61■□□□□ 0.57
SMARCE1-206ENST00000447024 BMP2KQ9NSY1 1161 aaPredicted RBP18.6■□□□□ 0.57
SMARCE1-206ENST00000447024 TIE1P35590 1138 aa18.54■□□□□ 0.56
SMARCE1-206ENST00000447024 FBXO3Q9UK99 471 aa18.53■□□□□ 0.56
SMARCE1-206ENST00000447024 FAM212AQ96EL1 285 aa18.52■□□□□ 0.56
SMARCE1-206ENST00000447024 PCDHB13Q9Y5F0 798 aa18.5■□□□□ 0.55
SMARCE1-206ENST00000447024 SGIP1Q9BQI5 828 aa18.48■□□□□ 0.55
SMARCE1-206ENST00000447024 POTEJP0CG39 1038 aa18.47■□□□□ 0.55
SMARCE1-206ENST00000447024 TTLL13PA6NNM8 815 aa18.45■□□□□ 0.54
SMARCE1-206ENST00000447024 POTEFA5A3E0 1075 aa18.4■□□□□ 0.54
SMARCE1-206ENST00000447024 IFNL1Q8IU54 200 aa18.39■□□□□ 0.53
SMARCE1-206ENST00000447024 VASPP50552 380 aaPredicted RBP18.34■□□□□ 0.53
SMARCE1-206ENST00000447024 DCAF8Q5TAQ9 597 aa18.34■□□□□ 0.53
SMARCE1-206ENST00000447024 MAMSTRQ6ZN01 415 aa18.34■□□□□ 0.53
SMARCE1-206ENST00000447024 TRIM35Q9UPQ4 493 aa18.33■□□□□ 0.52
SMARCE1-206ENST00000447024 COLQQ9Y215 455 aaPredicted RBP18.29■□□□□ 0.52
SMARCE1-206ENST00000447024 PYGBP11216 843 aa18.28■□□□□ 0.52
SMARCE1-206ENST00000447024 SCUBE2Q9NQ36 999 aa18.27■□□□□ 0.52
SMARCE1-206ENST00000447024 SEC24BO95487 1268 aa18.25■□□□□ 0.51
SMARCE1-206ENST00000447024 IER5LQ5T953 404 aa18.25■□□□□ 0.51
SMARCE1-206ENST00000447024 KLHL34Q8N239 644 aa18.25■□□□□ 0.51
SMARCE1-206ENST00000447024 TMEM106CQ9BVX2 250 aa18.25■□□□□ 0.51
SMARCE1-206ENST00000447024 PCDHB8Q9UN66 801 aa18.14■□□□□ 0.49
SMARCE1-206ENST00000447024 POTEMA6NI47 508 aa18.13■□□□□ 0.49
SMARCE1-206ENST00000447024 GSE1Q14687 1217 aa18.13■□□□□ 0.49
SMARCE1-206ENST00000447024 POTEGQ6S5H5 508 aa18.09■□□□□ 0.49
SMARCE1-206ENST00000447024 PLCG2P16885 1265 aa18.05■□□□□ 0.48
SMARCE1-206ENST00000447024 IRX5P78411 483 aaPredicted RBP18.05■□□□□ 0.48
SMARCE1-206ENST00000447024 LCE2DQ5TA82 110 aaPredicted RBP18.03■□□□□ 0.48
SMARCE1-206ENST00000447024 IFNLR1Q8IU57 520 aaPredicted RBP18.01■□□□□ 0.47
SMARCE1-206ENST00000447024 ZNF467Q7Z7K2 595 aaPredicted RBP18■□□□□ 0.47
SMARCE1-206ENST00000447024 FAM163AQ96GL9 167 aaPredicted RBP18■□□□□ 0.47
SMARCE1-206ENST00000447024 PLSCR2Q9NRY7 297 aa18■□□□□ 0.47
SMARCE1-206ENST00000447024 CHRM1P11229 460 aaPredicted RBP17.97■□□□□ 0.47
SMARCE1-206ENST00000447024 SPOCK2Q92563 424 aa17.96■□□□□ 0.47
SMARCE1-206ENST00000447024 OCEL1Q9H607 264 aa17.94■□□□□ 0.46
SMARCE1-206ENST00000447024 SLAIN1Q8ND83 568 aa17.9■□□□□ 0.46
SMARCE1-206ENST00000447024 CIZ1Q9ULV3 898 aaPredicted RBP17.87■□□□□ 0.45
SMARCE1-206ENST00000447024 PSEN1P49768 467 aa17.85■□□□□ 0.45
SMARCE1-206ENST00000447024 GOLGA2Q08379 1002 aa17.82■□□□□ 0.44
SMARCE1-206ENST00000447024 PCDH10Q9P2E7 1040 aa17.81■□□□□ 0.44
SMARCE1-206ENST00000447024 MKRN3Q13064 507 aaKnown RBP17.8■□□□□ 0.44
SMARCE1-206ENST00000447024 PDCD7Q8N8D1 485 aaKnown RBP17.79■□□□□ 0.44
SMARCE1-206ENST00000447024 PDAP1Q13442 181 aaKnown RBP17.77■□□□□ 0.44
SMARCE1-206ENST00000447024 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.73■□□□□ 0.43
SMARCE1-206ENST00000447024 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.7■□□□□ 0.425e-8■□□□□ 9.7
SMARCE1-206ENST00000447024 ST18O60284 1047 aa17.68■□□□□ 0.42
SMARCE1-206ENST00000447024 L3MBTL3Q96JM7 780 aaPredicted RBP17.64■□□□□ 0.41
SMARCE1-206ENST00000447024 CABP2Q9NPB3 220 aa17.64■□□□□ 0.41
SMARCE1-206ENST00000447024 ILDR1Q86SU0 546 aaPredicted RBP17.62■□□□□ 0.41
SMARCE1-206ENST00000447024 C3orf67Q6ZVT6 689 aa17.61■□□□□ 0.41
SMARCE1-206ENST00000447024 TRIM41Q8WV44 630 aa17.61■□□□□ 0.41
SMARCE1-206ENST00000447024 SNPHO15079 494 aa17.56■□□□□ 0.4
SMARCE1-206ENST00000447024 DPY19L2Q6NUT2 758 aa17.55■□□□□ 0.4
SMARCE1-206ENST00000447024 CDAN1Q8IWY9 1227 aa17.54■□□□□ 0.4
SMARCE1-206ENST00000447024 TMEM121BQ9BXQ6 578 aaPredicted RBP17.49■□□□□ 0.39
SMARCE1-206ENST00000447024 BOLA1Q9Y3E2 137 aa17.44■□□□□ 0.38
SMARCE1-206ENST00000447024 EFCAB3Q8N7B9 438 aa17.43■□□□□ 0.38
SMARCE1-206ENST00000447024 RNF25Q96BH1 459 aaPredicted RBP17.43■□□□□ 0.38
SMARCE1-206ENST00000447024 G3V3G9 751 aa17.41■□□□□ 0.38
SMARCE1-206ENST00000447024 RIOK3O14730 519 aaKnown RBP17.4■□□□□ 0.38
SMARCE1-206ENST00000447024 MARVELD3Q96A59 401 aa17.4■□□□□ 0.38
SMARCE1-206ENST00000447024 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.33■□□□□ 0.36
SMARCE1-206ENST00000447024 ZFP91Q96JP5 570 aaPredicted RBP17.33■□□□□ 0.36
SMARCE1-206ENST00000447024 VGFO15240 615 aaPredicted RBP17.32■□□□□ 0.36
SMARCE1-206ENST00000447024 EMP3P54852 163 aa17.27■□□□□ 0.36
SMARCE1-206ENST00000447024 SOX12O15370 315 aa17.24■□□□□ 0.35
SMARCE1-206ENST00000447024 HOXB3P14651 431 aaPredicted RBP17.22■□□□□ 0.35
SMARCE1-206ENST00000447024 MS4A4AQ96JQ5 239 aa17.21■□□□□ 0.35
SMARCE1-206ENST00000447024 MICALL2Q8IY33 904 aa17.2■□□□□ 0.34
SMARCE1-206ENST00000447024 PHF8Q9UPP1 1060 aa17.2■□□□□ 0.34
SMARCE1-206ENST00000447024 HS3ST6Q96QI5 342 aa17.17■□□□□ 0.34
SMARCE1-206ENST00000447024 FAM205CA6NFA0 338 aa17.16■□□□□ 0.34
SMARCE1-206ENST00000447024 POTEB3A0JP26 581 aa17.15■□□□□ 0.34
SMARCE1-206ENST00000447024 POTEBQ6S5H4 581 aa17.15■□□□□ 0.34
SMARCE1-206ENST00000447024 TMEM92Q6UXU6 159 aa17.13■□□□□ 0.33
SMARCE1-206ENST00000447024 SPNS2Q8IVW8 549 aa17.12■□□□□ 0.33
SMARCE1-206ENST00000447024 BCL11BQ9C0K0 894 aaPredicted RBP17.12■□□□□ 0.33
SMARCE1-206ENST00000447024 DOK7Q18PE1 504 aa17.11■□□□□ 0.33
SMARCE1-206ENST00000447024 ZNF710Q8N1W2 664 aa17.11■□□□□ 0.33
SMARCE1-206ENST00000447024 TAOK2Q9UL54 1235 aa17.11■□□□□ 0.33
SMARCE1-206ENST00000447024 ECM2O94769 699 aaPredicted RBP17.08■□□□□ 0.32
SMARCE1-206ENST00000447024 HOXB1P14653 301 aaPredicted RBP17.08■□□□□ 0.32
SMARCE1-206ENST00000447024 STK24Q9Y6E0 443 aa17.07■□□□□ 0.32
SMARCE1-206ENST00000447024 MMRN1Q13201 1228 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms