RNA–Protein interactions for RNA: ENST00000446731.2

MSRB3-203, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-203ENST00000446731 TRIM41Q8WV44 630 aa13.02□□□□□ -0.33
MSRB3-203ENST00000446731 PYGBP11216 843 aa13□□□□□ -0.33
MSRB3-203ENST00000446731 CD44P16070 742 aaKnown RBP12.99□□□□□ -0.33
MSRB3-203ENST00000446731 RNF25Q96BH1 459 aaPredicted RBP12.99□□□□□ -0.33
MSRB3-203ENST00000446731 CCDC61Q9Y6R9 512 aa12.99□□□□□ -0.33
MSRB3-203ENST00000446731 DCAF8L2P0C7V8 631 aa12.97□□□□□ -0.33
MSRB3-203ENST00000446731 C19orf67A6NJJ6 358 aa12.96□□□□□ -0.33
MSRB3-203ENST00000446731 CHRM1P11229 460 aaPredicted RBP12.96□□□□□ -0.33
MSRB3-203ENST00000446731 PAK3O75914 559 aaPredicted RBP12.94□□□□□ -0.34
MSRB3-203ENST00000446731 ZRANB1Q9UGI0 708 aa12.94□□□□□ -0.34
MSRB3-203ENST00000446731 HAX1O00165 279 aa12.9□□□□□ -0.34
MSRB3-203ENST00000446731 PHF12Q96QT6 1004 aa12.89□□□□□ -0.35
MSRB3-203ENST00000446731 RIOK3O14730 519 aaKnown RBP12.87□□□□□ -0.35
MSRB3-203ENST00000446731 EVX2Q03828 476 aa12.87□□□□□ -0.35
MSRB3-203ENST00000446731 KIF12Q96FN5 646 aa12.85□□□□□ -0.35
MSRB3-203ENST00000446731 MAP3K13O43283 966 aa12.83□□□□□ -0.36
MSRB3-203ENST00000446731 ZNF579Q8NAF0 562 aaKnown RBP12.83□□□□□ -0.36
MSRB3-203ENST00000446731 PCDHB8Q9UN66 801 aa12.82□□□□□ -0.36
MSRB3-203ENST00000446731 PCDHB13Q9Y5F0 798 aa12.82□□□□□ -0.36
MSRB3-203ENST00000446731 IFNL1Q8IU54 200 aa12.78□□□□□ -0.36
MSRB3-203ENST00000446731 VGFO15240 615 aaPredicted RBP12.77□□□□□ -0.37
MSRB3-203ENST00000446731 CHGAP10645 457 aaKnown RBP12.77□□□□□ -0.37
MSRB3-203ENST00000446731 ZNF467Q7Z7K2 595 aaPredicted RBP12.76□□□□□ -0.37
MSRB3-203ENST00000446731 SP7Q8TDD2 431 aaPredicted RBP12.76□□□□□ -0.37
MSRB3-203ENST00000446731 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.74□□□□□ -0.37
MSRB3-203ENST00000446731 ZFP91Q96JP5 570 aaPredicted RBP12.74□□□□□ -0.37
MSRB3-203ENST00000446731 HS6ST3Q8IZP7 471 aa12.73□□□□□ -0.37
MSRB3-203ENST00000446731 SGIP1Q9BQI5 828 aa12.73□□□□□ -0.37
MSRB3-203ENST00000446731 MS4A3Q96HJ5 214 aa12.72□□□□□ -0.37
MSRB3-203ENST00000446731 TAOK2Q9UL54 1235 aa12.7□□□□□ -0.38
MSRB3-203ENST00000446731 STK25O00506 426 aa12.69□□□□□ -0.38
MSRB3-203ENST00000446731 PDAP1Q13442 181 aaKnown RBP12.68□□□□□ -0.38
MSRB3-203ENST00000446731 TRPC6Q9Y210 931 aa12.68□□□□□ -0.38
MSRB3-203ENST00000446731 PSEN1P49768 467 aa12.67□□□□□ -0.38
MSRB3-203ENST00000446731 BBXQ8WY36 941 aaPredicted RBP12.67□□□□□ -0.38
MSRB3-203ENST00000446731 BCL11BQ9C0K0 894 aaPredicted RBP12.67□□□□□ -0.38
MSRB3-203ENST00000446731 GALR2O43603 387 aaPredicted RBP12.65□□□□□ -0.38
MSRB3-203ENST00000446731 STK24Q9Y6E0 443 aa12.65□□□□□ -0.38
MSRB3-203ENST00000446731 NKX1-1Q15270 411 aaPredicted RBP12.62□□□□□ -0.39
MSRB3-203ENST00000446731 DNAJC5Q9H3Z4 198 aa12.6□□□□□ -0.39
MSRB3-203ENST00000446731 PLCB2Q00722 1185 aa12.58□□□□□ -0.4
MSRB3-203ENST00000446731 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.56□□□□□ -0.4
MSRB3-203ENST00000446731 GABBR2O75899 941 aa12.55□□□□□ -0.4
MSRB3-203ENST00000446731 TMEM106CQ9BVX2 250 aa12.55□□□□□ -0.4
MSRB3-203ENST00000446731 PAXIP1Q6ZW49 1069 aaPredicted RBP12.54□□□□□ -0.4
MSRB3-203ENST00000446731 BMP2KQ9NSY1 1161 aaPredicted RBP12.53□□□□□ -0.4
MSRB3-203ENST00000446731 CLCN6P51797 869 aa12.52□□□□□ -0.41
MSRB3-203ENST00000446731 CABP2Q9NPB3 220 aa12.52□□□□□ -0.41
MSRB3-203ENST00000446731 TTLL13PA6NNM8 815 aa12.51□□□□□ -0.41
MSRB3-203ENST00000446731 TIE1P35590 1138 aa12.51□□□□□ -0.41
MSRB3-203ENST00000446731 CFAP44Q96MT7 982 aa12.51□□□□□ -0.41
MSRB3-203ENST00000446731 EFCAB3Q8N7B9 438 aa12.49□□□□□ -0.41
MSRB3-203ENST00000446731 SLC24A1O60721 1099 aa12.48□□□□□ -0.41
MSRB3-203ENST00000446731 SPRYD3Q8NCJ5 442 aa12.48□□□□□ -0.41
MSRB3-203ENST00000446731 GTPBP6O43824 516 aaPredicted RBP12.47□□□□□ -0.41
MSRB3-203ENST00000446731 MFRPQ9BY79 579 aa12.44□□□□□ -0.42
MSRB3-203ENST00000446731 ATN1P54259 1190 aaPredicted RBP12.43□□□□□ -0.42
MSRB3-203ENST00000446731 ATMINO43313 823 aaPredicted RBP12.42□□□□□ -0.42
MSRB3-203ENST00000446731 ASTLQ6HA08 431 aaPredicted RBP12.41□□□□□ -0.42
MSRB3-203ENST00000446731 TRIM35Q9UPQ4 493 aa12.41□□□□□ -0.42
MSRB3-203ENST00000446731 HAP1P54257 671 aaPredicted RBP12.4□□□□□ -0.42
MSRB3-203ENST00000446731 PHF8Q9UPP1 1060 aa12.4□□□□□ -0.42
MSRB3-203ENST00000446731 FBXO22Q8NEZ5 403 aa12.38□□□□□ -0.43
MSRB3-203ENST00000446731 SOX12O15370 315 aa12.37□□□□□ -0.43
MSRB3-203ENST00000446731 GOLGA2Q08379 1002 aa12.37□□□□□ -0.43
MSRB3-203ENST00000446731 POTEIP0CG38 1075 aa12.36□□□□□ -0.43
MSRB3-203ENST00000446731 PELP1Q8IZL8 1130 aaKnown RBP12.36□□□□□ -0.43
MSRB3-203ENST00000446731 MKRN3Q13064 507 aaKnown RBP12.35□□□□□ -0.43
MSRB3-203ENST00000446731 TSHZ2Q9NRE2 1034 aa12.35□□□□□ -0.43
MSRB3-203ENST00000446731 MS4A4AQ96JQ5 239 aa12.34□□□□□ -0.43
MSRB3-203ENST00000446731 DCBLD2Q96PD2 775 aa12.34□□□□□ -0.43
MSRB3-203ENST00000446731 NLRP6P59044 892 aa12.33□□□□□ -0.44
MSRB3-203ENST00000446731 RYDENQ9NUL5 291 aaKnown RBP12.32□□□□□ -0.44
MSRB3-203ENST00000446731 PPP1R37O75864 691 aa12.31□□□□□ -0.44
MSRB3-203ENST00000446731 ILDR1Q86SU0 546 aaPredicted RBP12.29□□□□□ -0.44
MSRB3-203ENST00000446731 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.28□□□□□ -0.44
MSRB3-203ENST00000446731 IRX5P78411 483 aaPredicted RBP12.25□□□□□ -0.45
MSRB3-203ENST00000446731 IER5LQ5T953 404 aa12.24□□□□□ -0.45
MSRB3-203ENST00000446731 PDCD7Q8N8D1 485 aaKnown RBP12.24□□□□□ -0.45
MSRB3-203ENST00000446731 DPY19L2Q6NUT2 758 aa12.23□□□□□ -0.45
MSRB3-203ENST00000446731 COLQQ9Y215 455 aaPredicted RBP12.21□□□□□ -0.45
MSRB3-203ENST00000446731 KDM2AQ9Y2K7 1162 aa12.21□□□□□ -0.45
MSRB3-203ENST00000446731 CADPS2Q86UW7 1296 aa12.2□□□□□ -0.46
MSRB3-203ENST00000446731 POTEFA5A3E0 1075 aa12.19□□□□□ -0.46
MSRB3-203ENST00000446731 SLC39A7Q92504 469 aa12.18□□□□□ -0.46
MSRB3-203ENST00000446731 OCEL1Q9H607 264 aa12.18□□□□□ -0.46
MSRB3-203ENST00000446731 METRNQ9UJH8 293 aa12.17□□□□□ -0.46
MSRB3-203ENST00000446731 VSIG10Q8N0Z9 540 aa12.16□□□□□ -0.46
MSRB3-203ENST00000446731 C7P10643 843 aa12.15□□□□□ -0.46
MSRB3-203ENST00000446731 PLCG2P16885 1265 aa12.15□□□□□ -0.46
MSRB3-203ENST00000446731 SEC24BO95487 1268 aa12.13□□□□□ -0.47
MSRB3-203ENST00000446731 MICALL2Q8IY33 904 aa12.09□□□□□ -0.47
MSRB3-203ENST00000446731 BOLA1Q9Y3E2 137 aa12.06□□□□□ -0.48
MSRB3-203ENST00000446731 TMEM121BQ9BXQ6 578 aaPredicted RBP12.05□□□□□ -0.48
MSRB3-203ENST00000446731 NCKAP5LQ9HCH0 1330 aa12.05□□□□□ -0.48
MSRB3-203ENST00000446731 LHX8Q68G74 356 aa12□□□□□ -0.49
MSRB3-203ENST00000446731 L3MBTL3Q96JM7 780 aaPredicted RBP12□□□□□ -0.49
MSRB3-203ENST00000446731 CRISPLD2Q9H0B8 497 aa11.99□□□□□ -0.49
MSRB3-203ENST00000446731 G3V3G9 751 aa11.97□□□□□ -0.49
MSRB3-203ENST00000446731 POTEB2H3BUK9 544 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms