RNA–Protein interactions for RNA: ENST00000446612.5

NUP35-205, Transcript of nucleoporin 35, humanhuman

TSL 3

Gene NUP35, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-205ENST00000446612 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
NUP35-205ENST00000446612 RASEFQ8IZ41 740 aa13.1□□□□□ -0.31
NUP35-205ENST00000446612 KIF12Q96FN5 646 aa13.1□□□□□ -0.31
NUP35-205ENST00000446612 POTEJP0CG39 1038 aa13.06□□□□□ -0.32
NUP35-205ENST00000446612 TRPC6Q9Y210 931 aa13.06□□□□□ -0.32
NUP35-205ENST00000446612 MIER1Q8N108 512 aa13.04□□□□□ -0.32
NUP35-205ENST00000446612 METRNQ9UJH8 293 aa13.01□□□□□ -0.33
NUP35-205ENST00000446612 ATN1P54259 1190 aaPredicted RBP13□□□□□ -0.33
NUP35-205ENST00000446612 MAP3K13O43283 966 aa12.99□□□□□ -0.33
NUP35-205ENST00000446612 NUBP1P53384 320 aa12.99□□□□□ -0.33
NUP35-205ENST00000446612 BMP2KQ9NSY1 1161 aaPredicted RBP12.98□□□□□ -0.33
NUP35-205ENST00000446612 POTEFA5A3E0 1075 aa12.97□□□□□ -0.33
NUP35-205ENST00000446612 C7P10643 843 aa12.97□□□□□ -0.33
NUP35-205ENST00000446612 FKBP8Q14318 412 aa12.97□□□□□ -0.33
NUP35-205ENST00000446612 SLC39A7Q92504 469 aa12.97□□□□□ -0.33
NUP35-205ENST00000446612 PLEKHG5O94827 1062 aa12.92□□□□□ -0.34
NUP35-205ENST00000446612 TIE1P35590 1138 aa12.9□□□□□ -0.34
NUP35-205ENST00000446612 PLCD3Q8N3E9 789 aa12.9□□□□□ -0.34
NUP35-205ENST00000446612 TTLL13PA6NNM8 815 aa12.86□□□□□ -0.35
NUP35-205ENST00000446612 SGIP1Q9BQI5 828 aa12.84□□□□□ -0.35
NUP35-205ENST00000446612 ZBTB47Q9UFB7 747 aaPredicted RBP12.81□□□□□ -0.36
NUP35-205ENST00000446612 LCE2DQ5TA82 110 aaPredicted RBP12.8□□□□□ -0.36
NUP35-205ENST00000446612 COLQQ9Y215 455 aaPredicted RBP12.8□□□□□ -0.36
NUP35-205ENST00000446612 IFNL1Q8IU54 200 aa12.79□□□□□ -0.36
NUP35-205ENST00000446612 PCDHB13Q9Y5F0 798 aa12.78□□□□□ -0.36
NUP35-205ENST00000446612 MAMSTRQ6ZN01 415 aa12.73□□□□□ -0.37
NUP35-205ENST00000446612 FAM212AQ96EL1 285 aa12.73□□□□□ -0.37
NUP35-205ENST00000446612 TRIM35Q9UPQ4 493 aa12.73□□□□□ -0.37
NUP35-205ENST00000446612 POTEMA6NI47 508 aa12.71□□□□□ -0.37
NUP35-205ENST00000446612 IER5LQ5T953 404 aa12.7□□□□□ -0.38
NUP35-205ENST00000446612 POTEGQ6S5H5 508 aa12.69□□□□□ -0.38
NUP35-205ENST00000446612 SCUBE2Q9NQ36 999 aa12.66□□□□□ -0.38
NUP35-205ENST00000446612 FBXO3Q9UK99 471 aa12.66□□□□□ -0.38
NUP35-205ENST00000446612 TMEM106CQ9BVX2 250 aa12.64□□□□□ -0.39
NUP35-205ENST00000446612 PYGBP11216 843 aa12.62□□□□□ -0.39
NUP35-205ENST00000446612 VASPP50552 380 aaPredicted RBP12.62□□□□□ -0.39
NUP35-205ENST00000446612 IRX5P78411 483 aaPredicted RBP12.62□□□□□ -0.39
NUP35-205ENST00000446612 SEC24BO95487 1268 aa12.59□□□□□ -0.39
NUP35-205ENST00000446612 DCAF8Q5TAQ9 597 aa12.58□□□□□ -0.4
NUP35-205ENST00000446612 PLSCR2Q9NRY7 297 aa12.58□□□□□ -0.4
NUP35-205ENST00000446612 PCDHB8Q9UN66 801 aa12.57□□□□□ -0.4
NUP35-205ENST00000446612 FAM163AQ96GL9 167 aaPredicted RBP12.52□□□□□ -0.41
NUP35-205ENST00000446612 CHRM1P11229 460 aaPredicted RBP12.48□□□□□ -0.41
NUP35-205ENST00000446612 PCDH10Q9P2E7 1040 aa12.47□□□□□ -0.41
NUP35-205ENST00000446612 PLCG2P16885 1265 aa12.46□□□□□ -0.41
NUP35-205ENST00000446612 OCEL1Q9H607 264 aa12.46□□□□□ -0.41
NUP35-205ENST00000446612 GSE1Q14687 1217 aa12.45□□□□□ -0.42
NUP35-205ENST00000446612 IFNLR1Q8IU57 520 aaPredicted RBP12.45□□□□□ -0.42
NUP35-205ENST00000446612 PDCD7Q8N8D1 485 aaKnown RBP12.44□□□□□ -0.42
NUP35-205ENST00000446612 KLHL34Q8N239 644 aa12.43□□□□□ -0.42
NUP35-205ENST00000446612 SLAIN1Q8ND83 568 aa12.42□□□□□ -0.42
NUP35-205ENST00000446612 ZNF467Q7Z7K2 595 aaPredicted RBP12.4□□□□□ -0.42
NUP35-205ENST00000446612 ILDR1Q86SU0 546 aaPredicted RBP12.38□□□□□ -0.43
NUP35-205ENST00000446612 ST18O60284 1047 aa12.37□□□□□ -0.43
NUP35-205ENST00000446612 PSEN1P49768 467 aa12.33□□□□□ -0.44
NUP35-205ENST00000446612 SPOCK2Q92563 424 aa12.32□□□□□ -0.44
NUP35-205ENST00000446612 PDAP1Q13442 181 aaKnown RBP12.26□□□□□ -0.45
NUP35-205ENST00000446612 CDAN1Q8IWY9 1227 aa12.26□□□□□ -0.45
NUP35-205ENST00000446612 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.25□□□□□ -0.45
NUP35-205ENST00000446612 MKRN3Q13064 507 aaKnown RBP12.23□□□□□ -0.45
NUP35-205ENST00000446612 DPY19L2Q6NUT2 758 aa12.22□□□□□ -0.45
NUP35-205ENST00000446612 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.22□□□□□ -0.455e-7■■■■□ 19.5
NUP35-205ENST00000446612 CIZ1Q9ULV3 898 aaPredicted RBP12.2□□□□□ -0.46
NUP35-205ENST00000446612 TMEM121BQ9BXQ6 578 aaPredicted RBP12.19□□□□□ -0.46
NUP35-205ENST00000446612 L3MBTL3Q96JM7 780 aaPredicted RBP12.18□□□□□ -0.46
NUP35-205ENST00000446612 GOLGA2Q08379 1002 aa12.17□□□□□ -0.46
NUP35-205ENST00000446612 CABP2Q9NPB3 220 aa12.16□□□□□ -0.46
NUP35-205ENST00000446612 SNPHO15079 494 aa12.14□□□□□ -0.47
NUP35-205ENST00000446612 C3orf67Q6ZVT6 689 aa12.13□□□□□ -0.47
NUP35-205ENST00000446612 MARVELD3Q96A59 401 aa12.12□□□□□ -0.47
NUP35-205ENST00000446612 RNF25Q96BH1 459 aaPredicted RBP12.11□□□□□ -0.47
NUP35-205ENST00000446612 POTEB3A0JP26 581 aa12.1□□□□□ -0.47
NUP35-205ENST00000446612 POTEBQ6S5H4 581 aa12.1□□□□□ -0.47
NUP35-205ENST00000446612 TRIM41Q8WV44 630 aa12.08□□□□□ -0.48
NUP35-205ENST00000446612 HOXB3P14651 431 aaPredicted RBP12.07□□□□□ -0.48
NUP35-205ENST00000446612 BOLA1Q9Y3E2 137 aa12.07□□□□□ -0.48
NUP35-205ENST00000446612 EFCAB3Q8N7B9 438 aa12.06□□□□□ -0.48
NUP35-205ENST00000446612 SPNS2Q8IVW8 549 aa12.02□□□□□ -0.49
NUP35-205ENST00000446612 MS4A4AQ96JQ5 239 aa12□□□□□ -0.49
NUP35-205ENST00000446612 KRTAP3-3Q9BYR6 98 aa12□□□□□ -0.49
NUP35-205ENST00000446612 KRTAP3-2Q9BYR7 98 aa12□□□□□ -0.49
NUP35-205ENST00000446612 MMRN1Q13201 1228 aa11.98□□□□□ -0.49
NUP35-205ENST00000446612 TMEM92Q6UXU6 159 aa11.98□□□□□ -0.49
NUP35-205ENST00000446612 RIOK3O14730 519 aaKnown RBP11.97□□□□□ -0.49
NUP35-205ENST00000446612 EMP3P54852 163 aa11.97□□□□□ -0.49
NUP35-205ENST00000446612 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.96□□□□□ -0.49
NUP35-205ENST00000446612 ZFP91Q96JP5 570 aaPredicted RBP11.96□□□□□ -0.49
NUP35-205ENST00000446612 HS3ST6Q96QI5 342 aa11.96□□□□□ -0.49
NUP35-205ENST00000446612 MICALL2Q8IY33 904 aa11.94□□□□□ -0.5
NUP35-205ENST00000446612 FAM205CA6NFA0 338 aa11.91□□□□□ -0.5
NUP35-205ENST00000446612 VGFO15240 615 aaPredicted RBP11.9□□□□□ -0.5
NUP35-205ENST00000446612 HOXB1P14653 301 aaPredicted RBP11.9□□□□□ -0.5
NUP35-205ENST00000446612 SOX12O15370 315 aa11.89□□□□□ -0.51
NUP35-205ENST00000446612 PHF8Q9UPP1 1060 aa11.89□□□□□ -0.51
NUP35-205ENST00000446612 G3V3G9 751 aa11.86□□□□□ -0.51
NUP35-205ENST00000446612 FBXO22Q8NEZ5 403 aa11.86□□□□□ -0.51
NUP35-205ENST00000446612 DOK7Q18PE1 504 aa11.82□□□□□ -0.52
NUP35-205ENST00000446612 GPR153Q6NV75 609 aa11.79□□□□□ -0.52
NUP35-205ENST00000446612 MFRPQ9BY79 579 aa11.78□□□□□ -0.52
NUP35-205ENST00000446612 BCL11BQ9C0K0 894 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms