RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 RASEFQ8IZ41 740 aa13.17□□□□□ -0.3
LINC00440-201ENST00000446579 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
LINC00440-201ENST00000446579 KIF12Q96FN5 646 aa13.11□□□□□ -0.31
LINC00440-201ENST00000446579 FBXO3Q9UK99 471 aa13.1□□□□□ -0.31
LINC00440-201ENST00000446579 PELP1Q8IZL8 1130 aaKnown RBP13.09□□□□□ -0.31
LINC00440-201ENST00000446579 MAP3K13O43283 966 aa13.07□□□□□ -0.32
LINC00440-201ENST00000446579 ATMINO43313 823 aaPredicted RBP13.06□□□□□ -0.32
LINC00440-201ENST00000446579 ASTLQ6HA08 431 aaPredicted RBP13.06□□□□□ -0.32
LINC00440-201ENST00000446579 NUBP1P53384 320 aa13.04□□□□□ -0.32
LINC00440-201ENST00000446579 METRNQ9UJH8 293 aa13.02□□□□□ -0.33
LINC00440-201ENST00000446579 FAM212AQ96EL1 285 aa13.01□□□□□ -0.33
LINC00440-201ENST00000446579 SLC39A7Q92504 469 aa13□□□□□ -0.33
LINC00440-201ENST00000446579 TRPC6Q9Y210 931 aa13□□□□□ -0.33
LINC00440-201ENST00000446579 ATN1P54259 1190 aaPredicted RBP12.99□□□□□ -0.33
LINC00440-201ENST00000446579 POTEB2H3BUK9 544 aa12.98□□□□□ -0.33
LINC00440-201ENST00000446579 C7P10643 843 aa12.97□□□□□ -0.33
LINC00440-201ENST00000446579 PCDHB13Q9Y5F0 798 aa12.97□□□□□ -0.33
LINC00440-201ENST00000446579 BMP2KQ9NSY1 1161 aaPredicted RBP12.96□□□□□ -0.33
LINC00440-201ENST00000446579 DCAF8Q5TAQ9 597 aa12.95□□□□□ -0.34
LINC00440-201ENST00000446579 KLHL34Q8N239 644 aa12.95□□□□□ -0.34
LINC00440-201ENST00000446579 TIE1P35590 1138 aa12.93□□□□□ -0.34
LINC00440-201ENST00000446579 VASPP50552 380 aaPredicted RBP12.92□□□□□ -0.34
LINC00440-201ENST00000446579 OTUD5Q96G74 571 aa12.92□□□□□ -0.34
LINC00440-201ENST00000446579 SGIP1Q9BQI5 828 aa12.9□□□□□ -0.34
LINC00440-201ENST00000446579 TTLL13PA6NNM8 815 aa12.87□□□□□ -0.35
LINC00440-201ENST00000446579 IFNL1Q8IU54 200 aa12.86□□□□□ -0.35
LINC00440-201ENST00000446579 PYGBP11216 843 aa12.85□□□□□ -0.35
LINC00440-201ENST00000446579 SEC24BO95487 1268 aa12.82□□□□□ -0.36
LINC00440-201ENST00000446579 TRIM35Q9UPQ4 493 aa12.82□□□□□ -0.36
LINC00440-201ENST00000446579 TMEM106CQ9BVX2 250 aa12.8□□□□□ -0.36
LINC00440-201ENST00000446579 POTEJP0CG39 1038 aa12.79□□□□□ -0.36
LINC00440-201ENST00000446579 MAMSTRQ6ZN01 415 aa12.79□□□□□ -0.36
LINC00440-201ENST00000446579 POTEFA5A3E0 1075 aa12.77□□□□□ -0.37
LINC00440-201ENST00000446579 SCUBE2Q9NQ36 999 aa12.77□□□□□ -0.37
LINC00440-201ENST00000446579 GSE1Q14687 1217 aa12.76□□□□□ -0.37
LINC00440-201ENST00000446579 PCDHB8Q9UN66 801 aa12.74□□□□□ -0.37
LINC00440-201ENST00000446579 COLQQ9Y215 455 aaPredicted RBP12.74□□□□□ -0.37
LINC00440-201ENST00000446579 IER5LQ5T953 404 aa12.71□□□□□ -0.37
LINC00440-201ENST00000446579 IFNLR1Q8IU57 520 aaPredicted RBP12.67□□□□□ -0.38
LINC00440-201ENST00000446579 SPOCK2Q92563 424 aa12.67□□□□□ -0.38
LINC00440-201ENST00000446579 PLCG2P16885 1265 aa12.66□□□□□ -0.38
LINC00440-201ENST00000446579 CIZ1Q9ULV3 898 aaPredicted RBP12.66□□□□□ -0.38
LINC00440-201ENST00000446579 ZNF467Q7Z7K2 595 aaPredicted RBP12.64□□□□□ -0.39
LINC00440-201ENST00000446579 FAM163AQ96GL9 167 aaPredicted RBP12.59□□□□□ -0.39
LINC00440-201ENST00000446579 POTEMA6NI47 508 aa12.58□□□□□ -0.4
LINC00440-201ENST00000446579 CHRM1P11229 460 aaPredicted RBP12.58□□□□□ -0.4
LINC00440-201ENST00000446579 GOLGA2Q08379 1002 aa12.58□□□□□ -0.4
LINC00440-201ENST00000446579 IRX5P78411 483 aaPredicted RBP12.57□□□□□ -0.4
LINC00440-201ENST00000446579 POTEGQ6S5H5 508 aa12.56□□□□□ -0.4
LINC00440-201ENST00000446579 OCEL1Q9H607 264 aa12.55□□□□□ -0.4
LINC00440-201ENST00000446579 PSEN1P49768 467 aa12.53□□□□□ -0.4
LINC00440-201ENST00000446579 MKRN3Q13064 507 aaKnown RBP12.53□□□□□ -0.4
LINC00440-201ENST00000446579 SLAIN1Q8ND83 568 aa12.52□□□□□ -0.41
LINC00440-201ENST00000446579 PLSCR2Q9NRY7 297 aa12.52□□□□□ -0.41
LINC00440-201ENST00000446579 PDAP1Q13442 181 aaKnown RBP12.47□□□□□ -0.41
LINC00440-201ENST00000446579 LCE2DQ5TA82 110 aaPredicted RBP12.43□□□□□ -0.42
LINC00440-201ENST00000446579 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.43□□□□□ -0.42
LINC00440-201ENST00000446579 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.42□□□□□ -0.42
LINC00440-201ENST00000446579 CABP2Q9NPB3 220 aa12.41□□□□□ -0.42
LINC00440-201ENST00000446579 PDCD7Q8N8D1 485 aaKnown RBP12.39□□□□□ -0.43
LINC00440-201ENST00000446579 TRIM41Q8WV44 630 aa12.39□□□□□ -0.43
LINC00440-201ENST00000446579 L3MBTL3Q96JM7 780 aaPredicted RBP12.37□□□□□ -0.43
LINC00440-201ENST00000446579 C3orf67Q6ZVT6 689 aa12.36□□□□□ -0.43
LINC00440-201ENST00000446579 PCDH10Q9P2E7 1040 aa12.32□□□□□ -0.44
LINC00440-201ENST00000446579 ST18O60284 1047 aa12.31□□□□□ -0.44
LINC00440-201ENST00000446579 G3V3G9 751 aa12.3□□□□□ -0.44
LINC00440-201ENST00000446579 DPY19L2Q6NUT2 758 aa12.29□□□□□ -0.44
LINC00440-201ENST00000446579 SNPHO15079 494 aa12.28□□□□□ -0.44
LINC00440-201ENST00000446579 RIOK3O14730 519 aaKnown RBP12.25□□□□□ -0.45
LINC00440-201ENST00000446579 EFCAB3Q8N7B9 438 aa12.25□□□□□ -0.45
LINC00440-201ENST00000446579 ILDR1Q86SU0 546 aaPredicted RBP12.23□□□□□ -0.45
LINC00440-201ENST00000446579 BOLA1Q9Y3E2 137 aa12.22□□□□□ -0.45
LINC00440-201ENST00000446579 CDAN1Q8IWY9 1227 aa12.21□□□□□ -0.45
LINC00440-201ENST00000446579 RNF25Q96BH1 459 aaPredicted RBP12.21□□□□□ -0.45
LINC00440-201ENST00000446579 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.19□□□□□ -0.46
LINC00440-201ENST00000446579 VGFO15240 615 aaPredicted RBP12.19□□□□□ -0.46
LINC00440-201ENST00000446579 ZFP91Q96JP5 570 aaPredicted RBP12.19□□□□□ -0.46
LINC00440-201ENST00000446579 MARVELD3Q96A59 401 aa12.17□□□□□ -0.46
LINC00440-201ENST00000446579 TMEM121BQ9BXQ6 578 aaPredicted RBP12.17□□□□□ -0.46
LINC00440-201ENST00000446579 TAOK2Q9UL54 1235 aa12.11□□□□□ -0.47
LINC00440-201ENST00000446579 SOX12O15370 315 aa12.1□□□□□ -0.47
LINC00440-201ENST00000446579 ECM2O94769 699 aaPredicted RBP12.1□□□□□ -0.47
LINC00440-201ENST00000446579 EMP3P54852 163 aa12.08□□□□□ -0.48
LINC00440-201ENST00000446579 PHF8Q9UPP1 1060 aa12.08□□□□□ -0.48
LINC00440-201ENST00000446579 BCL11BQ9C0K0 894 aaPredicted RBP12.07□□□□□ -0.48
LINC00440-201ENST00000446579 STK24Q9Y6E0 443 aa12.07□□□□□ -0.48
LINC00440-201ENST00000446579 AMER1Q5JTC6 1135 aaPredicted RBP12.06□□□□□ -0.48
LINC00440-201ENST00000446579 MICALL2Q8IY33 904 aa12.04□□□□□ -0.48
LINC00440-201ENST00000446579 ZNF710Q8N1W2 664 aa12.03□□□□□ -0.48
LINC00440-201ENST00000446579 MS4A4AQ96JQ5 239 aa12.03□□□□□ -0.48
LINC00440-201ENST00000446579 STK25O00506 426 aa12.02□□□□□ -0.49
LINC00440-201ENST00000446579 RTN4Q9NQC3 1192 aaKnown RBP12.02□□□□□ -0.49
LINC00440-201ENST00000446579 FAM205CA6NFA0 338 aa12.01□□□□□ -0.49
LINC00440-201ENST00000446579 PKD2Q13563 968 aa12.01□□□□□ -0.49
LINC00440-201ENST00000446579 NLRP6P59044 892 aa12□□□□□ -0.49
LINC00440-201ENST00000446579 HOXB3P14651 431 aaPredicted RBP11.98□□□□□ -0.49
LINC00440-201ENST00000446579 DOK7Q18PE1 504 aa11.98□□□□□ -0.49
LINC00440-201ENST00000446579 HS3ST6Q96QI5 342 aa11.97□□□□□ -0.49
LINC00440-201ENST00000446579 RGL2O15211 777 aa11.96□□□□□ -0.49
LINC00440-201ENST00000446579 TMEM92Q6UXU6 159 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms