RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 RNF25Q96BH1 459 aaPredicted RBP11.57□□□□□ -0.56
HMGB1P48-201ENST00000446155 TSPYL2Q9H2G4 693 aaPredicted RBP11.55□□□□□ -0.56
HMGB1P48-201ENST00000446155 CCDC61Q9Y6R9 512 aa11.55□□□□□ -0.56
HMGB1P48-201ENST00000446155 C19orf67A6NJJ6 358 aa11.49□□□□□ -0.57
HMGB1P48-201ENST00000446155 PYGBP11216 843 aa11.49□□□□□ -0.57
HMGB1P48-201ENST00000446155 CD44P16070 742 aaKnown RBP11.48□□□□□ -0.57
HMGB1P48-201ENST00000446155 RIOK3O14730 519 aaKnown RBP11.46□□□□□ -0.57
HMGB1P48-201ENST00000446155 PAK3O75914 559 aaPredicted RBP11.46□□□□□ -0.57
HMGB1P48-201ENST00000446155 DCAF8L2P0C7V8 631 aa11.46□□□□□ -0.57
HMGB1P48-201ENST00000446155 ZRANB1Q9UGI0 708 aa11.43□□□□□ -0.58
HMGB1P48-201ENST00000446155 KIF12Q96FN5 646 aa11.41□□□□□ -0.58
HMGB1P48-201ENST00000446155 ZNF579Q8NAF0 562 aaKnown RBP11.4□□□□□ -0.58
HMGB1P48-201ENST00000446155 SGIP1Q9BQI5 828 aa11.4□□□□□ -0.58
HMGB1P48-201ENST00000446155 VGFO15240 615 aaPredicted RBP11.38□□□□□ -0.59
HMGB1P48-201ENST00000446155 HS6ST3Q8IZP7 471 aa11.38□□□□□ -0.59
HMGB1P48-201ENST00000446155 ZNF467Q7Z7K2 595 aaPredicted RBP11.37□□□□□ -0.59
HMGB1P48-201ENST00000446155 PHF12Q96QT6 1004 aa11.37□□□□□ -0.59
HMGB1P48-201ENST00000446155 MAP3K13O43283 966 aa11.36□□□□□ -0.59
HMGB1P48-201ENST00000446155 DNAJC5Q9H3Z4 198 aa11.35□□□□□ -0.59
HMGB1P48-201ENST00000446155 TAOK2Q9UL54 1235 aa11.35□□□□□ -0.59
HMGB1P48-201ENST00000446155 CHGAP10645 457 aaKnown RBP11.34□□□□□ -0.59
HMGB1P48-201ENST00000446155 EVX2Q03828 476 aa11.34□□□□□ -0.59
HMGB1P48-201ENST00000446155 PCDHB8Q9UN66 801 aa11.34□□□□□ -0.59
HMGB1P48-201ENST00000446155 PCDHB13Q9Y5F0 798 aa11.34□□□□□ -0.59
HMGB1P48-201ENST00000446155 POTEHQ6S545 545 aa11.33□□□□□ -0.6
HMGB1P48-201ENST00000446155 IFNL1Q8IU54 200 aa11.33□□□□□ -0.6
HMGB1P48-201ENST00000446155 BBXQ8WY36 941 aaPredicted RBP11.33□□□□□ -0.6
HMGB1P48-201ENST00000446155 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.32□□□□□ -0.6
HMGB1P48-201ENST00000446155 ZFP91Q96JP5 570 aaPredicted RBP11.32□□□□□ -0.6
HMGB1P48-201ENST00000446155 HAX1O00165 279 aa11.31□□□□□ -0.6
HMGB1P48-201ENST00000446155 PDAP1Q13442 181 aaKnown RBP11.29□□□□□ -0.6
HMGB1P48-201ENST00000446155 STK25O00506 426 aa11.27□□□□□ -0.61
HMGB1P48-201ENST00000446155 PLCB2Q00722 1185 aa11.27□□□□□ -0.61
HMGB1P48-201ENST00000446155 MS4A3Q96HJ5 214 aa11.26□□□□□ -0.61
HMGB1P48-201ENST00000446155 BCL11BQ9C0K0 894 aaPredicted RBP11.26□□□□□ -0.61
HMGB1P48-201ENST00000446155 PSEN1P49768 467 aa11.25□□□□□ -0.61
HMGB1P48-201ENST00000446155 NKX1-1Q15270 411 aaPredicted RBP11.24□□□□□ -0.61
HMGB1P48-201ENST00000446155 SLC24A1O60721 1099 aa11.23□□□□□ -0.61
HMGB1P48-201ENST00000446155 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.21□□□□□ -0.61
HMGB1P48-201ENST00000446155 TRPC6Q9Y210 931 aa11.21□□□□□ -0.61
HMGB1P48-201ENST00000446155 STK24Q9Y6E0 443 aa11.21□□□□□ -0.61
HMGB1P48-201ENST00000446155 CLCN6P51797 869 aa11.19□□□□□ -0.62
HMGB1P48-201ENST00000446155 GALR2O43603 387 aaPredicted RBP11.17□□□□□ -0.62
HMGB1P48-201ENST00000446155 PAXIP1Q6ZW49 1069 aaPredicted RBP11.15□□□□□ -0.62
HMGB1P48-201ENST00000446155 TIE1P35590 1138 aa11.14□□□□□ -0.63
HMGB1P48-201ENST00000446155 SPRYD3Q8NCJ5 442 aa11.14□□□□□ -0.63
HMGB1P48-201ENST00000446155 GTPBP6O43824 516 aaPredicted RBP11.13□□□□□ -0.63
HMGB1P48-201ENST00000446155 CFAP44Q96MT7 982 aa11.1□□□□□ -0.63
HMGB1P48-201ENST00000446155 TMEM106CQ9BVX2 250 aa11.1□□□□□ -0.63
HMGB1P48-201ENST00000446155 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
HMGB1P48-201ENST00000446155 GABBR2O75899 941 aa11.09□□□□□ -0.63
HMGB1P48-201ENST00000446155 CABP2Q9NPB3 220 aa11.09□□□□□ -0.63
HMGB1P48-201ENST00000446155 TTLL13PA6NNM8 815 aa11.08□□□□□ -0.64
HMGB1P48-201ENST00000446155 EFCAB3Q8N7B9 438 aa11.07□□□□□ -0.64
HMGB1P48-201ENST00000446155 MFRPQ9BY79 579 aa11.07□□□□□ -0.64
HMGB1P48-201ENST00000446155 FBXO22Q8NEZ5 403 aa11.04□□□□□ -0.64
HMGB1P48-201ENST00000446155 SOX12O15370 315 aa11.03□□□□□ -0.64
HMGB1P48-201ENST00000446155 HAP1P54257 671 aaPredicted RBP11.03□□□□□ -0.64
HMGB1P48-201ENST00000446155 RYDENQ9NUL5 291 aaKnown RBP11.03□□□□□ -0.64
HMGB1P48-201ENST00000446155 ASTLQ6HA08 431 aaPredicted RBP11.02□□□□□ -0.65
HMGB1P48-201ENST00000446155 ATMINO43313 823 aaPredicted RBP11.01□□□□□ -0.65
HMGB1P48-201ENST00000446155 ATN1P54259 1190 aaPredicted RBP11□□□□□ -0.65
HMGB1P48-201ENST00000446155 ILDR1Q86SU0 546 aaPredicted RBP11□□□□□ -0.65
HMGB1P48-201ENST00000446155 SP7Q8TDD2 431 aaPredicted RBP11□□□□□ -0.65
HMGB1P48-201ENST00000446155 TSHZ2Q9NRE2 1034 aa11□□□□□ -0.65
HMGB1P48-201ENST00000446155 PHF8Q9UPP1 1060 aa11□□□□□ -0.65
HMGB1P48-201ENST00000446155 TRIM35Q9UPQ4 493 aa10.99□□□□□ -0.65
HMGB1P48-201ENST00000446155 NLRP6P59044 892 aa10.98□□□□□ -0.65
HMGB1P48-201ENST00000446155 MS4A4AQ96JQ5 239 aa10.97□□□□□ -0.65
HMGB1P48-201ENST00000446155 GOLGA2Q08379 1002 aa10.94□□□□□ -0.66
HMGB1P48-201ENST00000446155 MKRN3Q13064 507 aaKnown RBP10.94□□□□□ -0.66
HMGB1P48-201ENST00000446155 VSIG10Q8N0Z9 540 aa10.93□□□□□ -0.66
HMGB1P48-201ENST00000446155 PPP1R37O75864 691 aa10.92□□□□□ -0.66
HMGB1P48-201ENST00000446155 POTEIP0CG38 1075 aa10.92□□□□□ -0.66
HMGB1P48-201ENST00000446155 PELP1Q8IZL8 1130 aaKnown RBP10.92□□□□□ -0.66
HMGB1P48-201ENST00000446155 IER5LQ5T953 404 aa10.91□□□□□ -0.66
HMGB1P48-201ENST00000446155 KDM2AQ9Y2K7 1162 aa10.91□□□□□ -0.66
HMGB1P48-201ENST00000446155 IRX5P78411 483 aaPredicted RBP10.89□□□□□ -0.67
HMGB1P48-201ENST00000446155 DCBLD2Q96PD2 775 aa10.89□□□□□ -0.67
HMGB1P48-201ENST00000446155 PDCD7Q8N8D1 485 aaKnown RBP10.87□□□□□ -0.67
HMGB1P48-201ENST00000446155 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.87□□□□□ -0.67
HMGB1P48-201ENST00000446155 CADPS2Q86UW7 1296 aa10.84□□□□□ -0.67
HMGB1P48-201ENST00000446155 POTEFA5A3E0 1075 aa10.81□□□□□ -0.68
HMGB1P48-201ENST00000446155 DPY19L2Q6NUT2 758 aa10.81□□□□□ -0.68
HMGB1P48-201ENST00000446155 SLC39A7Q92504 469 aa10.81□□□□□ -0.68
HMGB1P48-201ENST00000446155 OCEL1Q9H607 264 aa10.81□□□□□ -0.68
HMGB1P48-201ENST00000446155 COLQQ9Y215 455 aaPredicted RBP10.79□□□□□ -0.68
HMGB1P48-201ENST00000446155 C7P10643 843 aa10.78□□□□□ -0.68
HMGB1P48-201ENST00000446155 PLCG2P16885 1265 aa10.75□□□□□ -0.69
HMGB1P48-201ENST00000446155 METRNQ9UJH8 293 aa10.75□□□□□ -0.69
HMGB1P48-201ENST00000446155 TMEM121BQ9BXQ6 578 aaPredicted RBP10.74□□□□□ -0.69
HMGB1P48-201ENST00000446155 MICALL2Q8IY33 904 aa10.73□□□□□ -0.69
HMGB1P48-201ENST00000446155 NCKAP5LQ9HCH0 1330 aa10.72□□□□□ -0.69
HMGB1P48-201ENST00000446155 CRISPLD2Q9H0B8 497 aa10.71□□□□□ -0.69
HMGB1P48-201ENST00000446155 SEC24BO95487 1268 aa10.7□□□□□ -0.7
HMGB1P48-201ENST00000446155 BOLA1Q9Y3E2 137 aa10.69□□□□□ -0.7
HMGB1P48-201ENST00000446155 MFSD10Q14728 455 aa10.67□□□□□ -0.7
HMGB1P48-201ENST00000446155 L3MBTL3Q96JM7 780 aaPredicted RBP10.67□□□□□ -0.7
HMGB1P48-201ENST00000446155 PDE4AP27815 886 aa10.63□□□□□ -0.71
HMGB1P48-201ENST00000446155 GPHNQ9NQX3 736 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms