RNA–Protein interactions for RNA: ENST00000445340.2

CDC40-205, Transcript of cell division cycle 40, humanhuman

TSL 5

Gene CDC40, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-205ENST00000445340 FKBP8Q14318 412 aa11.52□□□□□ -0.57
CDC40-205ENST00000445340 ASTLQ6HA08 431 aaPredicted RBP11.51□□□□□ -0.57
CDC40-205ENST00000445340 RASEFQ8IZ41 740 aa11.51□□□□□ -0.57
CDC40-205ENST00000445340 PLCD3Q8N3E9 789 aa11.51□□□□□ -0.57
CDC40-205ENST00000445340 KIF12Q96FN5 646 aa11.51□□□□□ -0.57
CDC40-205ENST00000445340 ATMINO43313 823 aaPredicted RBP11.5□□□□□ -0.57
CDC40-205ENST00000445340 OTUD5Q96G74 571 aa11.48□□□□□ -0.57
CDC40-205ENST00000445340 MAP3K13O43283 966 aa11.45□□□□□ -0.58
CDC40-205ENST00000445340 C7P10643 843 aa11.43□□□□□ -0.58
CDC40-205ENST00000445340 METRNQ9UJH8 293 aa11.43□□□□□ -0.58
CDC40-205ENST00000445340 ATN1P54259 1190 aaPredicted RBP11.42□□□□□ -0.58
CDC40-205ENST00000445340 SLC39A7Q92504 469 aa11.42□□□□□ -0.58
CDC40-205ENST00000445340 TRPC6Q9Y210 931 aa11.42□□□□□ -0.58
CDC40-205ENST00000445340 NUBP1P53384 320 aa11.4□□□□□ -0.58
CDC40-205ENST00000445340 BMP2KQ9NSY1 1161 aaPredicted RBP11.38□□□□□ -0.59
CDC40-205ENST00000445340 ZBTB47Q9UFB7 747 aaPredicted RBP11.38□□□□□ -0.59
CDC40-205ENST00000445340 POTEJP0CG39 1038 aa11.37□□□□□ -0.59
CDC40-205ENST00000445340 TIE1P35590 1138 aa11.33□□□□□ -0.6
CDC40-205ENST00000445340 SGIP1Q9BQI5 828 aa11.3□□□□□ -0.6
CDC40-205ENST00000445340 PCDHB13Q9Y5F0 798 aa11.3□□□□□ -0.6
CDC40-205ENST00000445340 POTEFA5A3E0 1075 aa11.29□□□□□ -0.6
CDC40-205ENST00000445340 TTLL13PA6NNM8 815 aa11.29□□□□□ -0.6
CDC40-205ENST00000445340 FAM212AQ96EL1 285 aa11.27□□□□□ -0.61
CDC40-205ENST00000445340 FBXO3Q9UK99 471 aa11.27□□□□□ -0.61
CDC40-205ENST00000445340 MAMSTRQ6ZN01 415 aa11.25□□□□□ -0.61
CDC40-205ENST00000445340 IFNL1Q8IU54 200 aa11.25□□□□□ -0.61
CDC40-205ENST00000445340 DCAF8Q5TAQ9 597 aa11.23□□□□□ -0.61
CDC40-205ENST00000445340 COLQQ9Y215 455 aaPredicted RBP11.23□□□□□ -0.61
CDC40-205ENST00000445340 TRIM35Q9UPQ4 493 aa11.21□□□□□ -0.61
CDC40-205ENST00000445340 SEC24BO95487 1268 aa11.2□□□□□ -0.62
CDC40-205ENST00000445340 SCUBE2Q9NQ36 999 aa11.19□□□□□ -0.62
CDC40-205ENST00000445340 PYGBP11216 843 aa11.17□□□□□ -0.62
CDC40-205ENST00000445340 TMEM106CQ9BVX2 250 aa11.17□□□□□ -0.62
CDC40-205ENST00000445340 POTEMA6NI47 508 aa11.16□□□□□ -0.62
CDC40-205ENST00000445340 IER5LQ5T953 404 aa11.16□□□□□ -0.62
CDC40-205ENST00000445340 VASPP50552 380 aaPredicted RBP11.15□□□□□ -0.62
CDC40-205ENST00000445340 KLHL34Q8N239 644 aa11.14□□□□□ -0.63
CDC40-205ENST00000445340 POTEGQ6S5H5 508 aa11.13□□□□□ -0.63
CDC40-205ENST00000445340 FAM163AQ96GL9 167 aaPredicted RBP11.12□□□□□ -0.63
CDC40-205ENST00000445340 PLSCR2Q9NRY7 297 aa11.12□□□□□ -0.63
CDC40-205ENST00000445340 PCDHB8Q9UN66 801 aa11.1□□□□□ -0.63
CDC40-205ENST00000445340 LCE2DQ5TA82 110 aaPredicted RBP11.07□□□□□ -0.64
CDC40-205ENST00000445340 GSE1Q14687 1217 aa11.05□□□□□ -0.64
CDC40-205ENST00000445340 PLCG2P16885 1265 aa11.04□□□□□ -0.64
CDC40-205ENST00000445340 IRX5P78411 483 aaPredicted RBP11.04□□□□□ -0.64
CDC40-205ENST00000445340 OCEL1Q9H607 264 aa11□□□□□ -0.65
CDC40-205ENST00000445340 CHRM1P11229 460 aaPredicted RBP10.99□□□□□ -0.65
CDC40-205ENST00000445340 IFNLR1Q8IU57 520 aaPredicted RBP10.98□□□□□ -0.65
CDC40-205ENST00000445340 SLAIN1Q8ND83 568 aa10.98□□□□□ -0.65
CDC40-205ENST00000445340 ZNF467Q7Z7K2 595 aaPredicted RBP10.97□□□□□ -0.65
CDC40-205ENST00000445340 PCDH10Q9P2E7 1040 aa10.97□□□□□ -0.65
CDC40-205ENST00000445340 SPOCK2Q92563 424 aa10.93□□□□□ -0.66
CDC40-205ENST00000445340 PSEN1P49768 467 aa10.91□□□□□ -0.66
CDC40-205ENST00000445340 CIZ1Q9ULV3 898 aaPredicted RBP10.91□□□□□ -0.66
CDC40-205ENST00000445340 GOLGA2Q08379 1002 aa10.88□□□□□ -0.67
CDC40-205ENST00000445340 MKRN3Q13064 507 aaKnown RBP10.88□□□□□ -0.67
CDC40-205ENST00000445340 ST18O60284 1047 aa10.87□□□□□ -0.67
CDC40-205ENST00000445340 PDCD7Q8N8D1 485 aaKnown RBP10.87□□□□□ -0.67
CDC40-205ENST00000445340 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.85□□□□□ -0.67
CDC40-205ENST00000445340 PDAP1Q13442 181 aaKnown RBP10.83□□□□□ -0.68
CDC40-205ENST00000445340 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.83□□□□□ -0.68
CDC40-205ENST00000445340 CDAN1Q8IWY9 1227 aa10.8□□□□□ -0.68
CDC40-205ENST00000445340 L3MBTL3Q96JM7 780 aaPredicted RBP10.8□□□□□ -0.68
CDC40-205ENST00000445340 SNPHO15079 494 aa10.77□□□□□ -0.69
CDC40-205ENST00000445340 DPY19L2Q6NUT2 758 aa10.77□□□□□ -0.69
CDC40-205ENST00000445340 ILDR1Q86SU0 546 aaPredicted RBP10.77□□□□□ -0.69
CDC40-205ENST00000445340 CABP2Q9NPB3 220 aa10.77□□□□□ -0.69
CDC40-205ENST00000445340 C3orf67Q6ZVT6 689 aa10.75□□□□□ -0.69
CDC40-205ENST00000445340 TMEM121BQ9BXQ6 578 aaPredicted RBP10.71□□□□□ -0.69
CDC40-205ENST00000445340 TRIM41Q8WV44 630 aa10.69□□□□□ -0.7
CDC40-205ENST00000445340 MARVELD3Q96A59 401 aa10.69□□□□□ -0.7
CDC40-205ENST00000445340 BOLA1Q9Y3E2 137 aa10.66□□□□□ -0.7
CDC40-205ENST00000445340 EFCAB3Q8N7B9 438 aa10.65□□□□□ -0.7
CDC40-205ENST00000445340 G3V3G9 751 aa10.63□□□□□ -0.71
CDC40-205ENST00000445340 RNF25Q96BH1 459 aaPredicted RBP10.6□□□□□ -0.71
CDC40-205ENST00000445340 RIOK3O14730 519 aaKnown RBP10.59□□□□□ -0.71
CDC40-205ENST00000445340 EMP3P54852 163 aa10.57□□□□□ -0.72
CDC40-205ENST00000445340 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.56□□□□□ -0.72
CDC40-205ENST00000445340 ZFP91Q96JP5 570 aaPredicted RBP10.56□□□□□ -0.72
CDC40-205ENST00000445340 POTEB3A0JP26 581 aa10.55□□□□□ -0.72
CDC40-205ENST00000445340 HOXB3P14651 431 aaPredicted RBP10.55□□□□□ -0.72
CDC40-205ENST00000445340 POTEBQ6S5H4 581 aa10.55□□□□□ -0.72
CDC40-205ENST00000445340 SPNS2Q8IVW8 549 aa10.54□□□□□ -0.72
CDC40-205ENST00000445340 FAM205CA6NFA0 338 aa10.53□□□□□ -0.72
CDC40-205ENST00000445340 VGFO15240 615 aaPredicted RBP10.53□□□□□ -0.72
CDC40-205ENST00000445340 SOX12O15370 315 aa10.53□□□□□ -0.72
CDC40-205ENST00000445340 HS3ST6Q96QI5 342 aa10.51□□□□□ -0.73
CDC40-205ENST00000445340 MMRN1Q13201 1228 aa10.5□□□□□ -0.73
CDC40-205ENST00000445340 MS4A4AQ96JQ5 239 aa10.5□□□□□ -0.73
CDC40-205ENST00000445340 MICALL2Q8IY33 904 aa10.49□□□□□ -0.73
CDC40-205ENST00000445340 PHF8Q9UPP1 1060 aa10.49□□□□□ -0.73
CDC40-205ENST00000445340 TMEM92Q6UXU6 159 aa10.48□□□□□ -0.73
CDC40-205ENST00000445340 ZNF710Q8N1W2 664 aa10.48□□□□□ -0.73
CDC40-205ENST00000445340 HOXB1P14653 301 aaPredicted RBP10.46□□□□□ -0.73
CDC40-205ENST00000445340 DOK7Q18PE1 504 aa10.46□□□□□ -0.73
CDC40-205ENST00000445340 KRTAP3-3Q9BYR6 98 aa10.46□□□□□ -0.73
CDC40-205ENST00000445340 KRTAP3-2Q9BYR7 98 aa10.46□□□□□ -0.73
CDC40-205ENST00000445340 BCL11BQ9C0K0 894 aaPredicted RBP10.43□□□□□ -0.74
CDC40-205ENST00000445340 NLRP6P59044 892 aa10.4□□□□□ -0.74
CDC40-205ENST00000445340 TAOK2Q9UL54 1235 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms