RNA–Protein interactions for RNA: ENST00000444263.5

LINC00278-202, long intergenic non-protein coding RNA 278, humanhuman

TSL 3 BASIC

Gene LINC00278, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00278-202ENST00000444263 FBXO3Q9UK99 471 aa12.61□□□□□ -0.39
LINC00278-202ENST00000444263 CCDC61Q9Y6R9 512 aa12.6□□□□□ -0.39
LINC00278-202ENST00000444263 RASEFQ8IZ41 740 aa12.58□□□□□ -0.4
LINC00278-202ENST00000444263 KIF12Q96FN5 646 aa12.53□□□□□ -0.4
LINC00278-202ENST00000444263 FAM212AQ96EL1 285 aa12.5□□□□□ -0.41
LINC00278-202ENST00000444263 NUBP1P53384 320 aa12.48□□□□□ -0.41
LINC00278-202ENST00000444263 ASTLQ6HA08 431 aaPredicted RBP12.48□□□□□ -0.41
LINC00278-202ENST00000444263 MAP3K13O43283 966 aa12.47□□□□□ -0.41
LINC00278-202ENST00000444263 ATMINO43313 823 aaPredicted RBP12.46□□□□□ -0.41
LINC00278-202ENST00000444263 SLC39A7Q92504 469 aa12.44□□□□□ -0.42
LINC00278-202ENST00000444263 PELP1Q8IZL8 1130 aaKnown RBP12.43□□□□□ -0.42
LINC00278-202ENST00000444263 VASPP50552 380 aaPredicted RBP12.42□□□□□ -0.42
LINC00278-202ENST00000444263 METRNQ9UJH8 293 aa12.42□□□□□ -0.42
LINC00278-202ENST00000444263 KLHL34Q8N239 644 aa12.41□□□□□ -0.42
LINC00278-202ENST00000444263 C7P10643 843 aa12.4□□□□□ -0.42
LINC00278-202ENST00000444263 PCDHB13Q9Y5F0 798 aa12.4□□□□□ -0.42
LINC00278-202ENST00000444263 TIE1P35590 1138 aa12.38□□□□□ -0.43
LINC00278-202ENST00000444263 ATN1P54259 1190 aaPredicted RBP12.38□□□□□ -0.43
LINC00278-202ENST00000444263 DCAF8Q5TAQ9 597 aa12.38□□□□□ -0.43
LINC00278-202ENST00000444263 SGIP1Q9BQI5 828 aa12.38□□□□□ -0.43
LINC00278-202ENST00000444263 BMP2KQ9NSY1 1161 aaPredicted RBP12.38□□□□□ -0.43
LINC00278-202ENST00000444263 TRPC6Q9Y210 931 aa12.36□□□□□ -0.43
LINC00278-202ENST00000444263 POTEB2H3BUK9 544 aa12.31□□□□□ -0.44
LINC00278-202ENST00000444263 TTLL13PA6NNM8 815 aa12.29□□□□□ -0.44
LINC00278-202ENST00000444263 IFNL1Q8IU54 200 aa12.28□□□□□ -0.44
LINC00278-202ENST00000444263 OTUD5Q96G74 571 aa12.28□□□□□ -0.44
LINC00278-202ENST00000444263 PYGBP11216 843 aa12.27□□□□□ -0.45
LINC00278-202ENST00000444263 GSE1Q14687 1217 aa12.27□□□□□ -0.45
LINC00278-202ENST00000444263 SEC24BO95487 1268 aa12.24□□□□□ -0.45
LINC00278-202ENST00000444263 MAMSTRQ6ZN01 415 aa12.24□□□□□ -0.45
LINC00278-202ENST00000444263 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
LINC00278-202ENST00000444263 TMEM106CQ9BVX2 250 aa12.23□□□□□ -0.45
LINC00278-202ENST00000444263 SCUBE2Q9NQ36 999 aa12.21□□□□□ -0.45
LINC00278-202ENST00000444263 IER5LQ5T953 404 aa12.19□□□□□ -0.46
LINC00278-202ENST00000444263 SPOCK2Q92563 424 aa12.18□□□□□ -0.46
LINC00278-202ENST00000444263 PCDHB8Q9UN66 801 aa12.15□□□□□ -0.46
LINC00278-202ENST00000444263 POTEFA5A3E0 1075 aa12.14□□□□□ -0.47
LINC00278-202ENST00000444263 POTEJP0CG39 1038 aa12.14□□□□□ -0.47
LINC00278-202ENST00000444263 ZNF467Q7Z7K2 595 aaPredicted RBP12.14□□□□□ -0.47
LINC00278-202ENST00000444263 IFNLR1Q8IU57 520 aaPredicted RBP12.13□□□□□ -0.47
LINC00278-202ENST00000444263 CIZ1Q9ULV3 898 aaPredicted RBP12.13□□□□□ -0.47
LINC00278-202ENST00000444263 COLQQ9Y215 455 aaPredicted RBP12.13□□□□□ -0.47
LINC00278-202ENST00000444263 PLCG2P16885 1265 aa12.12□□□□□ -0.47
LINC00278-202ENST00000444263 CHRM1P11229 460 aaPredicted RBP12.08□□□□□ -0.48
LINC00278-202ENST00000444263 GOLGA2Q08379 1002 aa12.05□□□□□ -0.48
LINC00278-202ENST00000444263 PSEN1P49768 467 aa12.01□□□□□ -0.49
LINC00278-202ENST00000444263 IRX5P78411 483 aaPredicted RBP12.01□□□□□ -0.49
LINC00278-202ENST00000444263 OCEL1Q9H607 264 aa12.01□□□□□ -0.49
LINC00278-202ENST00000444263 MKRN3Q13064 507 aaKnown RBP12□□□□□ -0.49
LINC00278-202ENST00000444263 PDAP1Q13442 181 aaKnown RBP11.97□□□□□ -0.49
LINC00278-202ENST00000444263 POTEMA6NI47 508 aa11.96□□□□□ -0.49
LINC00278-202ENST00000444263 TRIM41Q8WV44 630 aa11.96□□□□□ -0.49
LINC00278-202ENST00000444263 FAM163AQ96GL9 167 aaPredicted RBP11.95□□□□□ -0.5
LINC00278-202ENST00000444263 POTEGQ6S5H5 508 aa11.93□□□□□ -0.5
LINC00278-202ENST00000444263 SLAIN1Q8ND83 568 aa11.93□□□□□ -0.5
LINC00278-202ENST00000444263 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC00278-202ENST00000444263 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.88□□□□□ -0.51
LINC00278-202ENST00000444263 CABP2Q9NPB3 220 aa11.86□□□□□ -0.51
LINC00278-202ENST00000444263 L3MBTL3Q96JM7 780 aaPredicted RBP11.85□□□□□ -0.51
LINC00278-202ENST00000444263 C3orf67Q6ZVT6 689 aa11.84□□□□□ -0.51
LINC00278-202ENST00000444263 PDCD7Q8N8D1 485 aaKnown RBP11.84□□□□□ -0.51
LINC00278-202ENST00000444263 PLSCR2Q9NRY7 297 aa11.84□□□□□ -0.51
LINC00278-202ENST00000444263 G3V3G9 751 aa11.8□□□□□ -0.52
LINC00278-202ENST00000444263 LCE2DQ5TA82 110 aaPredicted RBP11.8□□□□□ -0.52
LINC00278-202ENST00000444263 PCDH10Q9P2E7 1040 aa11.78□□□□□ -0.52
LINC00278-202ENST00000444263 RIOK3O14730 519 aaKnown RBP11.77□□□□□ -0.53
LINC00278-202ENST00000444263 SNPHO15079 494 aa11.77□□□□□ -0.53
LINC00278-202ENST00000444263 VGFO15240 615 aaPredicted RBP11.72□□□□□ -0.53
LINC00278-202ENST00000444263 ILDR1Q86SU0 546 aaPredicted RBP11.72□□□□□ -0.53
LINC00278-202ENST00000444263 ST18O60284 1047 aa11.71□□□□□ -0.53
LINC00278-202ENST00000444263 DPY19L2Q6NUT2 758 aa11.7□□□□□ -0.54
LINC00278-202ENST00000444263 EFCAB3Q8N7B9 438 aa11.7□□□□□ -0.54
LINC00278-202ENST00000444263 BOLA1Q9Y3E2 137 aa11.7□□□□□ -0.54
LINC00278-202ENST00000444263 TAOK2Q9UL54 1235 aa11.69□□□□□ -0.54
LINC00278-202ENST00000444263 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.68□□□□□ -0.54
LINC00278-202ENST00000444263 RNF25Q96BH1 459 aaPredicted RBP11.68□□□□□ -0.54
LINC00278-202ENST00000444263 ZFP91Q96JP5 570 aaPredicted RBP11.68□□□□□ -0.54
LINC00278-202ENST00000444263 TMEM121BQ9BXQ6 578 aaPredicted RBP11.65□□□□□ -0.54
LINC00278-202ENST00000444263 ECM2O94769 699 aaPredicted RBP11.63□□□□□ -0.55
LINC00278-202ENST00000444263 SOX12O15370 315 aa11.62□□□□□ -0.55
LINC00278-202ENST00000444263 CDAN1Q8IWY9 1227 aa11.61□□□□□ -0.55
LINC00278-202ENST00000444263 BCL11BQ9C0K0 894 aaPredicted RBP11.57□□□□□ -0.56
LINC00278-202ENST00000444263 STK24Q9Y6E0 443 aa11.57□□□□□ -0.56
LINC00278-202ENST00000444263 MARVELD3Q96A59 401 aa11.56□□□□□ -0.56
LINC00278-202ENST00000444263 PHF8Q9UPP1 1060 aa11.56□□□□□ -0.56
LINC00278-202ENST00000444263 EMP3P54852 163 aa11.54□□□□□ -0.56
LINC00278-202ENST00000444263 STK25O00506 426 aa11.53□□□□□ -0.56
LINC00278-202ENST00000444263 MICALL2Q8IY33 904 aa11.53□□□□□ -0.56
LINC00278-202ENST00000444263 NLRP6P59044 892 aa11.52□□□□□ -0.57
LINC00278-202ENST00000444263 ZNF710Q8N1W2 664 aa11.51□□□□□ -0.57
LINC00278-202ENST00000444263 MS4A4AQ96JQ5 239 aa11.5□□□□□ -0.57
LINC00278-202ENST00000444263 PKD2Q13563 968 aa11.48□□□□□ -0.57
LINC00278-202ENST00000444263 DOK7Q18PE1 504 aa11.48□□□□□ -0.57
LINC00278-202ENST00000444263 RGL2O15211 777 aa11.47□□□□□ -0.57
LINC00278-202ENST00000444263 RIMBP2O15034 1052 aa11.46□□□□□ -0.57
LINC00278-202ENST00000444263 FAM205CA6NFA0 338 aa11.43□□□□□ -0.58
LINC00278-202ENST00000444263 HOXB3P14651 431 aaPredicted RBP11.43□□□□□ -0.58
LINC00278-202ENST00000444263 FBXO22Q8NEZ5 403 aa11.42□□□□□ -0.58
LINC00278-202ENST00000444263 HS3ST6Q96QI5 342 aa11.41□□□□□ -0.58
LINC00278-202ENST00000444263 MFRPQ9BY79 579 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms