RNA–Protein interactions for RNA: ENST00000442478.1

LINC00380-201, long intergenic non-protein coding RNA 380, humanhuman

TSL 2 BASIC

Gene LINC00380, Length 353 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00380-201ENST00000442478 ATMINO43313 823 aaPredicted RBP17.53■□□□□ 0.4
LINC00380-201ENST00000442478 SLC39A7Q92504 469 aa17.53■□□□□ 0.4
LINC00380-201ENST00000442478 C7P10643 843 aa17.52■□□□□ 0.4
LINC00380-201ENST00000442478 POTEJP0CG39 1038 aa17.48■□□□□ 0.39
LINC00380-201ENST00000442478 TSPYL2Q9H2G4 693 aaPredicted RBP17.45■□□□□ 0.38
LINC00380-201ENST00000442478 MAMSTRQ6ZN01 415 aa17.44■□□□□ 0.38
LINC00380-201ENST00000442478 EHMT2Q96KQ7 1210 aa17.4■□□□□ 0.38
LINC00380-201ENST00000442478 PCDH10Q9P2E7 1040 aa17.4■□□□□ 0.38
LINC00380-201ENST00000442478 ATN1P54259 1190 aaPredicted RBP17.36■□□□□ 0.37
LINC00380-201ENST00000442478 CCDC61Q9Y6R9 512 aa17.34■□□□□ 0.37
LINC00380-201ENST00000442478 FAM163AQ96GL9 167 aaPredicted RBP17.33■□□□□ 0.36
LINC00380-201ENST00000442478 SCUBE2Q9NQ36 999 aa17.32■□□□□ 0.36
LINC00380-201ENST00000442478 KIF12Q96FN5 646 aa17.28■□□□□ 0.36
LINC00380-201ENST00000442478 LCE2DQ5TA82 110 aaPredicted RBP17.27■□□□□ 0.36
LINC00380-201ENST00000442478 BMP2KQ9NSY1 1161 aaPredicted RBP17.23■□□□□ 0.35
LINC00380-201ENST00000442478 TRPC6Q9Y210 931 aa17.21■□□□□ 0.35
LINC00380-201ENST00000442478 POTEFA5A3E0 1075 aa17.2■□□□□ 0.34
LINC00380-201ENST00000442478 PROM2Q8N271 834 aa17.2■□□□□ 0.34
LINC00380-201ENST00000442478 MAP3K13O43283 966 aa17.17■□□□□ 0.34
LINC00380-201ENST00000442478 TIE1P35590 1138 aa17.13■□□□□ 0.33
LINC00380-201ENST00000442478 PLEKHG5O94827 1062 aa17.11■□□□□ 0.33
LINC00380-201ENST00000442478 MIER1Q8N108 512 aa17.1■□□□□ 0.33
LINC00380-201ENST00000442478 SEC24BO95487 1268 aa17.08■□□□□ 0.32
LINC00380-201ENST00000442478 RASEFQ8IZ41 740 aa17.08■□□□□ 0.32
LINC00380-201ENST00000442478 COLQQ9Y215 455 aaPredicted RBP17.06■□□□□ 0.32
LINC00380-201ENST00000442478 TTLL13PA6NNM8 815 aa17.04■□□□□ 0.32
LINC00380-201ENST00000442478 CDAN1Q8IWY9 1227 aa16.94■□□□□ 0.3
LINC00380-201ENST00000442478 TRIM35Q9UPQ4 493 aa16.94■□□□□ 0.3
LINC00380-201ENST00000442478 PCDHB13Q9Y5F0 798 aa16.92■□□□□ 0.3
LINC00380-201ENST00000442478 IER5LQ5T953 404 aa16.91■□□□□ 0.3
LINC00380-201ENST00000442478 PLCD3Q8N3E9 789 aa16.88■□□□□ 0.29
LINC00380-201ENST00000442478 SGIP1Q9BQI5 828 aa16.88■□□□□ 0.29
LINC00380-201ENST00000442478 SLAIN1Q8ND83 568 aa16.85■□□□□ 0.29
LINC00380-201ENST00000442478 ST18O60284 1047 aa16.79■□□□□ 0.28
LINC00380-201ENST00000442478 IFNL1Q8IU54 200 aa16.79■□□□□ 0.28
LINC00380-201ENST00000442478 TMEM106CQ9BVX2 250 aa16.77■□□□□ 0.28
LINC00380-201ENST00000442478 NUBP1P53384 320 aa16.76■□□□□ 0.27
LINC00380-201ENST00000442478 ZBTB47Q9UFB7 747 aaPredicted RBP16.75■□□□□ 0.27
LINC00380-201ENST00000442478 PLCG2P16885 1265 aa16.74■□□□□ 0.27
LINC00380-201ENST00000442478 FAM212AQ96EL1 285 aa16.68■□□□□ 0.26
LINC00380-201ENST00000442478 IRX5P78411 483 aaPredicted RBP16.64■□□□□ 0.25
LINC00380-201ENST00000442478 OCEL1Q9H607 264 aa16.58■□□□□ 0.24
LINC00380-201ENST00000442478 TMEM121BQ9BXQ6 578 aaPredicted RBP16.54■□□□□ 0.24
LINC00380-201ENST00000442478 MMRN1Q13201 1228 aa16.53■□□□□ 0.24
LINC00380-201ENST00000442478 SNPHO15079 494 aa16.52■□□□□ 0.24
LINC00380-201ENST00000442478 SPNS2Q8IVW8 549 aa16.52■□□□□ 0.24
LINC00380-201ENST00000442478 DCAF8Q5TAQ9 597 aa16.51■□□□□ 0.23
LINC00380-201ENST00000442478 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.51■□□□□ 0.23
LINC00380-201ENST00000442478 PYGBP11216 843 aa16.5■□□□□ 0.23
LINC00380-201ENST00000442478 MARVELD3Q96A59 401 aa16.48■□□□□ 0.23
LINC00380-201ENST00000442478 PCDHB8Q9UN66 801 aa16.45■□□□□ 0.22
LINC00380-201ENST00000442478 FKBP8Q14318 412 aa16.31■□□□□ 0.2
LINC00380-201ENST00000442478 C3orf67Q6ZVT6 689 aa16.31■□□□□ 0.2
LINC00380-201ENST00000442478 EMP3P54852 163 aa16.3■□□□□ 0.2
LINC00380-201ENST00000442478 PDCD7Q8N8D1 485 aaKnown RBP16.3■□□□□ 0.2
LINC00380-201ENST00000442478 GOLGA2Q08379 1002 aa16.28■□□□□ 0.2
LINC00380-201ENST00000442478 L3MBTL3Q96JM7 780 aaPredicted RBP16.27■□□□□ 0.2
LINC00380-201ENST00000442478 MKRN3Q13064 507 aaKnown RBP16.26■□□□□ 0.19
LINC00380-201ENST00000442478 ZNF467Q7Z7K2 595 aaPredicted RBP16.21■□□□□ 0.19
LINC00380-201ENST00000442478 FAM205CA6NFA0 338 aa16.19■□□□□ 0.18
LINC00380-201ENST00000442478 HS3ST6Q96QI5 342 aa16.19■□□□□ 0.18
LINC00380-201ENST00000442478 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.19■□□□□ 0.18
LINC00380-201ENST00000442478 POTEB3A0JP26 581 aa16.18■□□□□ 0.18
LINC00380-201ENST00000442478 POTEBQ6S5H4 581 aa16.18■□□□□ 0.18
LINC00380-201ENST00000442478 GSE1Q14687 1217 aa16.16■□□□□ 0.18
LINC00380-201ENST00000442478 KRTAP3-3Q9BYR6 98 aa16.16■□□□□ 0.18
LINC00380-201ENST00000442478 KRTAP3-2Q9BYR7 98 aa16.16■□□□□ 0.18
LINC00380-201ENST00000442478 FBXO3Q9UK99 471 aa16.14■□□□□ 0.17
LINC00380-201ENST00000442478 KLHL34Q8N239 644 aa16.13■□□□□ 0.17
LINC00380-201ENST00000442478 PSEN1P49768 467 aa16.11■□□□□ 0.17
LINC00380-201ENST00000442478 CHRM1P11229 460 aaPredicted RBP16.07■□□□□ 0.16
LINC00380-201ENST00000442478 DPY19L2Q6NUT2 758 aa16.04■□□□□ 0.16
LINC00380-201ENST00000442478 ILDR1Q86SU0 546 aaPredicted RBP15.99■□□□□ 0.15
LINC00380-201ENST00000442478 G3V3G9 751 aa15.98■□□□□ 0.15
LINC00380-201ENST00000442478 HOXB3P14651 431 aaPredicted RBP15.96■□□□□ 0.15
LINC00380-201ENST00000442478 VASPP50552 380 aaPredicted RBP15.96■□□□□ 0.15
LINC00380-201ENST00000442478 PDAP1Q13442 181 aaKnown RBP15.96■□□□□ 0.15
LINC00380-201ENST00000442478 BOLA1Q9Y3E2 137 aa15.95■□□□□ 0.14
LINC00380-201ENST00000442478 CABP2Q9NPB3 220 aa15.93■□□□□ 0.14
LINC00380-201ENST00000442478 ZNF710Q8N1W2 664 aa15.92■□□□□ 0.14
LINC00380-201ENST00000442478 HOXB1P14653 301 aaPredicted RBP15.88■□□□□ 0.13
LINC00380-201ENST00000442478 ERBB3P21860 1342 aa15.88■□□□□ 0.13
LINC00380-201ENST00000442478 DOK7Q18PE1 504 aa15.84■□□□□ 0.13
LINC00380-201ENST00000442478 CIZ1Q9ULV3 898 aaPredicted RBP15.8■□□□□ 0.12
LINC00380-201ENST00000442478 RNF166Q96A37 237 aaPredicted RBP15.79■□□□□ 0.12
LINC00380-201ENST00000442478 RIMBP2O15034 1052 aa15.75■□□□□ 0.11
LINC00380-201ENST00000442478 VARS2Q5ST30 1063 aaKnown RBP15.75■□□□□ 0.11
LINC00380-201ENST00000442478 SPOCK2Q92563 424 aa15.72■□□□□ 0.11
LINC00380-201ENST00000442478 MYT1LQ9UL68 1186 aa15.71■□□□□ 0.11
LINC00380-201ENST00000442478 EFCAB3Q8N7B9 438 aa15.67■□□□□ 0.1
LINC00380-201ENST00000442478 IFNLR1Q8IU57 520 aaPredicted RBP15.63■□□□□ 0.09
LINC00380-201ENST00000442478 ZNF687Q8N1G0 1237 aa15.63■□□□□ 0.09
LINC00380-201ENST00000442478 ZSWIM6Q9HCJ5 1215 aa15.61■□□□□ 0.09
LINC00380-201ENST00000442478 TMEM92Q6UXU6 159 aa15.6■□□□□ 0.09
LINC00380-201ENST00000442478 MICALL2Q8IY33 904 aa15.58■□□□□ 0.08
LINC00380-201ENST00000442478 GPR153Q6NV75 609 aa15.56■□□□□ 0.08
LINC00380-201ENST00000442478 PTGER2P43116 358 aa15.5■□□□□ 0.07
LINC00380-201ENST00000442478 ANKRD13DQ6ZTN6 518 aa15.5■□□□□ 0.07
LINC00380-201ENST00000442478 ARSIQ5FYB1 569 aa15.47■□□□□ 0.07
LINC00380-201ENST00000442478 TRIM41Q8WV44 630 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms