RNA–Protein interactions for RNA: ENST00000440731.4

PGBD4P3-201, Transcript of piggyBac transposable element derived 4 pseudogene 3, humanhuman

BASIC

Gene PGBD4P3, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P3-201ENST00000440731 ZRANB1Q9UGI0 708 aa10.54□□□□□ -0.72
PGBD4P3-201ENST00000440731 NPM1P06748 294 aaKnown RBP eCLIP10.52□□□□□ -0.73
PGBD4P3-201ENST00000440731 MNX1P50219 401 aaPredicted RBP10.52□□□□□ -0.73
PGBD4P3-201ENST00000440731 POTEB2H3BUK9 544 aa10.51□□□□□ -0.73
PGBD4P3-201ENST00000440731 GALR2O43603 387 aaPredicted RBP10.5□□□□□ -0.73
PGBD4P3-201ENST00000440731 SPOCK2Q92563 424 aa10.45□□□□□ -0.74
PGBD4P3-201ENST00000440731 TSPYL2Q9H2G4 693 aaPredicted RBP10.42□□□□□ -0.74
PGBD4P3-201ENST00000440731 DCAF8Q5TAQ9 597 aa10.4□□□□□ -0.74
PGBD4P3-201ENST00000440731 RASEFQ8IZ41 740 aa10.4□□□□□ -0.74
PGBD4P3-201ENST00000440731 NUBP1P53384 320 aa10.39□□□□□ -0.75
PGBD4P3-201ENST00000440731 PCDH10Q9P2E7 1040 aa10.39□□□□□ -0.75
PGBD4P3-201ENST00000440731 CIZ1Q9ULV3 898 aaPredicted RBP10.38□□□□□ -0.75
PGBD4P3-201ENST00000440731 PAK3O75914 559 aaPredicted RBP10.37□□□□□ -0.75
PGBD4P3-201ENST00000440731 FAM212AQ96EL1 285 aa10.36□□□□□ -0.75
PGBD4P3-201ENST00000440731 PHF12Q96QT6 1004 aa10.35□□□□□ -0.75
PGBD4P3-201ENST00000440731 PELP1Q8IZL8 1130 aaKnown RBP10.34□□□□□ -0.75
PGBD4P3-201ENST00000440731 GSE1Q14687 1217 aa10.29□□□□□ -0.76
PGBD4P3-201ENST00000440731 METRNQ9UJH8 293 aa10.28□□□□□ -0.76
PGBD4P3-201ENST00000440731 PYGBP11216 843 aa10.26□□□□□ -0.77
PGBD4P3-201ENST00000440731 POTEJP0CG39 1038 aa10.25□□□□□ -0.77
PGBD4P3-201ENST00000440731 LCE2DQ5TA82 110 aaPredicted RBP10.24□□□□□ -0.77
PGBD4P3-201ENST00000440731 FAM163AQ96GL9 167 aaPredicted RBP10.24□□□□□ -0.77
PGBD4P3-201ENST00000440731 CCDC61Q9Y6R9 512 aa10.24□□□□□ -0.77
PGBD4P3-201ENST00000440731 MAMSTRQ6ZN01 415 aa10.22□□□□□ -0.77
PGBD4P3-201ENST00000440731 SLC39A7Q92504 469 aa10.22□□□□□ -0.77
PGBD4P3-201ENST00000440731 C7P10643 843 aa10.2□□□□□ -0.78
PGBD4P3-201ENST00000440731 ASTLQ6HA08 431 aaPredicted RBP10.2□□□□□ -0.78
PGBD4P3-201ENST00000440731 ECM2O94769 699 aaPredicted RBP10.19□□□□□ -0.78
PGBD4P3-201ENST00000440731 PKD2Q13563 968 aa10.19□□□□□ -0.78
PGBD4P3-201ENST00000440731 RTN4Q9NQC3 1192 aaKnown RBP10.19□□□□□ -0.78
PGBD4P3-201ENST00000440731 ATMINO43313 823 aaPredicted RBP10.18□□□□□ -0.78
PGBD4P3-201ENST00000440731 AMER1Q5JTC6 1135 aaPredicted RBP10.18□□□□□ -0.78
PGBD4P3-201ENST00000440731 MS4A3Q96HJ5 214 aa10.18□□□□□ -0.78
PGBD4P3-201ENST00000440731 MAP3K13O43283 966 aa10.16□□□□□ -0.78
PGBD4P3-201ENST00000440731 SCUBE2Q9NQ36 999 aa10.16□□□□□ -0.78
PGBD4P3-201ENST00000440731 KIF12Q96FN5 646 aa10.15□□□□□ -0.78
PGBD4P3-201ENST00000440731 PCDHB13Q9Y5F0 798 aa10.14□□□□□ -0.79
PGBD4P3-201ENST00000440731 TRIM41Q8WV44 630 aa10.11□□□□□ -0.79
PGBD4P3-201ENST00000440731 PCDHB8Q9UN66 801 aa10.11□□□□□ -0.79
PGBD4P3-201ENST00000440731 DCAF8L2P0C7V8 631 aa10.09□□□□□ -0.79
PGBD4P3-201ENST00000440731 CHRM1P11229 460 aaPredicted RBP10.09□□□□□ -0.79
PGBD4P3-201ENST00000440731 IFNL1Q8IU54 200 aa10.08□□□□□ -0.8
PGBD4P3-201ENST00000440731 RGL2O15211 777 aa10.06□□□□□ -0.8
PGBD4P3-201ENST00000440731 ATN1P54259 1190 aaPredicted RBP10.06□□□□□ -0.8
PGBD4P3-201ENST00000440731 CDAN1Q8IWY9 1227 aa10.06□□□□□ -0.8
PGBD4P3-201ENST00000440731 ZNF467Q7Z7K2 595 aaPredicted RBP10.04□□□□□ -0.8
PGBD4P3-201ENST00000440731 RNF25Q96BH1 459 aaPredicted RBP10.03□□□□□ -0.8
PGBD4P3-201ENST00000440731 SGIP1Q9BQI5 828 aa10.03□□□□□ -0.8
PGBD4P3-201ENST00000440731 RIOK3O14730 519 aaKnown RBP10.02□□□□□ -0.81
PGBD4P3-201ENST00000440731 TRPC6Q9Y210 931 aa10.02□□□□□ -0.81
PGBD4P3-201ENST00000440731 POTEFA5A3E0 1075 aa10□□□□□ -0.81
PGBD4P3-201ENST00000440731 PSEN1P49768 467 aa9.96□□□□□ -0.82
PGBD4P3-201ENST00000440731 PDAP1Q13442 181 aaKnown RBP9.96□□□□□ -0.82
PGBD4P3-201ENST00000440731 TMEM106CQ9BVX2 250 aa9.96□□□□□ -0.82
PGBD4P3-201ENST00000440731 VGFO15240 615 aaPredicted RBP9.95□□□□□ -0.82
PGBD4P3-201ENST00000440731 BMP2KQ9NSY1 1161 aaPredicted RBP9.95□□□□□ -0.82
PGBD4P3-201ENST00000440731 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.94□□□□□ -0.82
PGBD4P3-201ENST00000440731 ZFP91Q96JP5 570 aaPredicted RBP9.94□□□□□ -0.82
PGBD4P3-201ENST00000440731 TAOK2Q9UL54 1235 aa9.94□□□□□ -0.82
PGBD4P3-201ENST00000440731 TTLL13PA6NNM8 815 aa9.92□□□□□ -0.82
PGBD4P3-201ENST00000440731 STK25O00506 426 aa9.91□□□□□ -0.82
PGBD4P3-201ENST00000440731 CHGAP10645 457 aaKnown RBP9.91□□□□□ -0.82
PGBD4P3-201ENST00000440731 TIE1P35590 1138 aa9.91□□□□□ -0.82
PGBD4P3-201ENST00000440731 SEC24BO95487 1268 aa9.9□□□□□ -0.82
PGBD4P3-201ENST00000440731 GOLGA2Q08379 1002 aa9.9□□□□□ -0.82
PGBD4P3-201ENST00000440731 STK24Q9Y6E0 443 aa9.9□□□□□ -0.82
PGBD4P3-201ENST00000440731 BCL11BQ9C0K0 894 aaPredicted RBP9.89□□□□□ -0.83
PGBD4P3-201ENST00000440731 COLQQ9Y215 455 aaPredicted RBP9.89□□□□□ -0.83
PGBD4P3-201ENST00000440731 CABP2Q9NPB3 220 aa9.88□□□□□ -0.83
PGBD4P3-201ENST00000440731 TRIM35Q9UPQ4 493 aa9.87□□□□□ -0.83
PGBD4P3-201ENST00000440731 ST18O60284 1047 aa9.86□□□□□ -0.83
PGBD4P3-201ENST00000440731 MMRN1Q13201 1228 aa9.85□□□□□ -0.83
PGBD4P3-201ENST00000440731 SLAIN1Q8ND83 568 aa9.83□□□□□ -0.84
PGBD4P3-201ENST00000440731 MKRN3Q13064 507 aaKnown RBP9.82□□□□□ -0.84
PGBD4P3-201ENST00000440731 SPNS2Q8IVW8 549 aa9.81□□□□□ -0.84
PGBD4P3-201ENST00000440731 EFCAB3Q8N7B9 438 aa9.81□□□□□ -0.84
PGBD4P3-201ENST00000440731 HS6ST3Q8IZP7 471 aa9.79□□□□□ -0.84
PGBD4P3-201ENST00000440731 IER5LQ5T953 404 aa9.75□□□□□ -0.85
PGBD4P3-201ENST00000440731 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.74□□□□□ -0.85
PGBD4P3-201ENST00000440731 PLCG2P16885 1265 aa9.71□□□□□ -0.86
PGBD4P3-201ENST00000440731 PHF8Q9UPP1 1060 aa9.71□□□□□ -0.86
PGBD4P3-201ENST00000440731 SOX12O15370 315 aa9.7□□□□□ -0.86
PGBD4P3-201ENST00000440731 BBXQ8WY36 941 aaPredicted RBP9.69□□□□□ -0.86
PGBD4P3-201ENST00000440731 IRX5P78411 483 aaPredicted RBP9.68□□□□□ -0.86
PGBD4P3-201ENST00000440731 NKX1-1Q15270 411 aaPredicted RBP9.68□□□□□ -0.86
PGBD4P3-201ENST00000440731 OCEL1Q9H607 264 aa9.68□□□□□ -0.86
PGBD4P3-201ENST00000440731 NLRP6P59044 892 aa9.67□□□□□ -0.86
PGBD4P3-201ENST00000440731 TMEM121BQ9BXQ6 578 aaPredicted RBP9.67□□□□□ -0.86
PGBD4P3-201ENST00000440731 MFRPQ9BY79 579 aa9.67□□□□□ -0.86
PGBD4P3-201ENST00000440731 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.67□□□□□ -0.86
PGBD4P3-201ENST00000440731 DPY19L2Q6NUT2 758 aa9.66□□□□□ -0.86
PGBD4P3-201ENST00000440731 MARVELD3Q96A59 401 aa9.66□□□□□ -0.86
PGBD4P3-201ENST00000440731 CFAP44Q96MT7 982 aa9.65□□□□□ -0.86
PGBD4P3-201ENST00000440731 PAXIP1Q6ZW49 1069 aaPredicted RBP9.63□□□□□ -0.87
PGBD4P3-201ENST00000440731 PDCD7Q8N8D1 485 aaKnown RBP9.62□□□□□ -0.87
PGBD4P3-201ENST00000440731 SNPHO15079 494 aa9.61□□□□□ -0.87
PGBD4P3-201ENST00000440731 FBXO22Q8NEZ5 403 aa9.61□□□□□ -0.87
PGBD4P3-201ENST00000440731 MS4A4AQ96JQ5 239 aa9.61□□□□□ -0.87
PGBD4P3-201ENST00000440731 DNAJC5Q9H3Z4 198 aa9.61□□□□□ -0.87
PGBD4P3-201ENST00000440731 G3V3G9 751 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms