RNA–Protein interactions for RNA: ENST00000440664.5

LINC01549-201, Transcript of long intergenic non-protein coding RNA 1549, humanhuman

TSL 3 BASIC

Gene LINC01549, Length 714 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549-201ENST00000440664 ASTLQ6HA08 431 aaPredicted RBP11.23□□□□□ -0.61
LINC01549-201ENST00000440664 ATMINO43313 823 aaPredicted RBP11.19□□□□□ -0.62
LINC01549-201ENST00000440664 MMRN1Q13201 1228 aa11.18□□□□□ -0.62
LINC01549-201ENST00000440664 CREBZFQ9NS37 354 aa11.18□□□□□ -0.62
LINC01549-201ENST00000440664 MS4A3Q96HJ5 214 aa11.13□□□□□ -0.63
LINC01549-201ENST00000440664 ZBTB22O15209 634 aa11.11□□□□□ -0.63
LINC01549-201ENST00000440664 SPNS2Q8IVW8 549 aa11.09□□□□□ -0.63
LINC01549-201ENST00000440664 ATN1P54259 1190 aaPredicted RBP11.03□□□□□ -0.64
LINC01549-201ENST00000440664 NPM1P06748 294 aaKnown RBP eCLIP11.01□□□□□ -0.65
LINC01549-201ENST00000440664 ST18O60284 1047 aa10.99□□□□□ -0.65
LINC01549-201ENST00000440664 POTEFA5A3E0 1075 aa10.98□□□□□ -0.65
LINC01549-201ENST00000440664 STAG3Q9UJ98 1225 aa10.97□□□□□ -0.65
LINC01549-201ENST00000440664 SEC24BO95487 1268 aa10.91□□□□□ -0.66
LINC01549-201ENST00000440664 SLAIN1Q8ND83 568 aa10.89□□□□□ -0.67
LINC01549-201ENST00000440664 BMP2KQ9NSY1 1161 aaPredicted RBP10.87□□□□□ -0.67
LINC01549-201ENST00000440664 COLQQ9Y215 455 aaPredicted RBP10.85□□□□□ -0.67
LINC01549-201ENST00000440664 MNX1P50219 401 aaPredicted RBP10.81□□□□□ -0.68
LINC01549-201ENST00000440664 TMEM121BQ9BXQ6 578 aaPredicted RBP10.8□□□□□ -0.68
LINC01549-201ENST00000440664 TSPYL2Q9H2G4 693 aaPredicted RBP10.8□□□□□ -0.68
LINC01549-201ENST00000440664 TRPC6Q9Y210 931 aa10.77□□□□□ -0.69
LINC01549-201ENST00000440664 MARVELD3Q96A59 401 aa10.76□□□□□ -0.69
LINC01549-201ENST00000440664 TIE1P35590 1138 aa10.75□□□□□ -0.69
LINC01549-201ENST00000440664 KIF12Q96FN5 646 aa10.73□□□□□ -0.69
LINC01549-201ENST00000440664 CCDC61Q9Y6R9 512 aa10.72□□□□□ -0.69
LINC01549-201ENST00000440664 TTLL13PA6NNM8 815 aa10.68□□□□□ -0.7
LINC01549-201ENST00000440664 SNPHO15079 494 aa10.66□□□□□ -0.7
LINC01549-201ENST00000440664 IER5LQ5T953 404 aa10.66□□□□□ -0.7
LINC01549-201ENST00000440664 MAP3K13O43283 966 aa10.64□□□□□ -0.71
LINC01549-201ENST00000440664 TRIM35Q9UPQ4 493 aa10.64□□□□□ -0.71
LINC01549-201ENST00000440664 EMP3P54852 163 aa10.6□□□□□ -0.71
LINC01549-201ENST00000440664 KRTAP3-3Q9BYR6 98 aa10.59□□□□□ -0.71
LINC01549-201ENST00000440664 KRTAP3-2Q9BYR7 98 aa10.59□□□□□ -0.71
LINC01549-201ENST00000440664 PLCG2P16885 1265 aa10.57□□□□□ -0.72
LINC01549-201ENST00000440664 HS3ST6Q96QI5 342 aa10.52□□□□□ -0.73
LINC01549-201ENST00000440664 FAM205CA6NFA0 338 aa10.5□□□□□ -0.73
LINC01549-201ENST00000440664 SPDYE4A6NLX3 237 aa10.49□□□□□ -0.73
LINC01549-201ENST00000440664 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.49□□□□□ -0.73
LINC01549-201ENST00000440664 POTEB3A0JP26 581 aa10.46□□□□□ -0.73
LINC01549-201ENST00000440664 POTEBQ6S5H4 581 aa10.46□□□□□ -0.73
LINC01549-201ENST00000440664 RNF166Q96A37 237 aaPredicted RBP10.46□□□□□ -0.73
LINC01549-201ENST00000440664 PCDHB13Q9Y5F0 798 aa10.42□□□□□ -0.74
LINC01549-201ENST00000440664 IRX5P78411 483 aaPredicted RBP10.4□□□□□ -0.74
LINC01549-201ENST00000440664 TMEM106CQ9BVX2 250 aa10.4□□□□□ -0.74
LINC01549-201ENST00000440664 RASEFQ8IZ41 740 aa10.37□□□□□ -0.75
LINC01549-201ENST00000440664 SGIP1Q9BQI5 828 aa10.37□□□□□ -0.75
LINC01549-201ENST00000440664 OCEL1Q9H607 264 aa10.36□□□□□ -0.75
LINC01549-201ENST00000440664 C3orf67Q6ZVT6 689 aa10.3□□□□□ -0.76
LINC01549-201ENST00000440664 IFNL1Q8IU54 200 aa10.3□□□□□ -0.76
LINC01549-201ENST00000440664 MYT1LQ9UL68 1186 aa10.3□□□□□ -0.76
LINC01549-201ENST00000440664 PLEKHG5O94827 1062 aa10.27□□□□□ -0.77
LINC01549-201ENST00000440664 CSRNP3Q8WYN3 585 aa10.22□□□□□ -0.77
LINC01549-201ENST00000440664 ERBB3P21860 1342 aa10.16□□□□□ -0.78
LINC01549-201ENST00000440664 MIER1Q8N108 512 aa10.15□□□□□ -0.78
LINC01549-201ENST00000440664 L3MBTL3Q96JM7 780 aaPredicted RBP10.13□□□□□ -0.79
LINC01549-201ENST00000440664 EHMT2Q96KQ7 1210 aa10.12□□□□□ -0.79
LINC01549-201ENST00000440664 ZNF710Q8N1W2 664 aa10.1□□□□□ -0.79
LINC01549-201ENST00000440664 PDCD7Q8N8D1 485 aaKnown RBP10.09□□□□□ -0.79
LINC01549-201ENST00000440664 PTGER2P43116 358 aa10.08□□□□□ -0.8
LINC01549-201ENST00000440664 HOXB1P14653 301 aaPredicted RBP10.07□□□□□ -0.8
LINC01549-201ENST00000440664 VARS2Q5ST30 1063 aaKnown RBP10.06□□□□□ -0.8
LINC01549-201ENST00000440664 PLA2G2EQ9NZK7 142 aa10.05□□□□□ -0.8
LINC01549-201ENST00000440664 HOXB3P14651 431 aaPredicted RBP10.03□□□□□ -0.8
LINC01549-201ENST00000440664 FAM212AQ96EL1 285 aa10.02□□□□□ -0.81
LINC01549-201ENST00000440664 GOLGA2Q08379 1002 aa10□□□□□ -0.81
LINC01549-201ENST00000440664 MKRN3Q13064 507 aaKnown RBP9.99□□□□□ -0.81
LINC01549-201ENST00000440664 NUBP1P53384 320 aa9.98□□□□□ -0.81
LINC01549-201ENST00000440664 PLCD3Q8N3E9 789 aa9.98□□□□□ -0.81
LINC01549-201ENST00000440664 DOK7Q18PE1 504 aa9.97□□□□□ -0.81
LINC01549-201ENST00000440664 ANKRD13DQ6ZTN6 518 aa9.96□□□□□ -0.82
LINC01549-201ENST00000440664 PROM2Q8N271 834 aa9.96□□□□□ -0.82
LINC01549-201ENST00000440664 ZNF687Q8N1G0 1237 aa9.95□□□□□ -0.82
LINC01549-201ENST00000440664 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.95□□□□□ -0.82
LINC01549-201ENST00000440664 PCDHB8Q9UN66 801 aa9.95□□□□□ -0.82
LINC01549-201ENST00000440664 RIMBP2O15034 1052 aa9.93□□□□□ -0.82
LINC01549-201ENST00000440664 ZBTB47Q9UFB7 747 aaPredicted RBP9.93□□□□□ -0.82
LINC01549-201ENST00000440664 G3V3G9 751 aa9.91□□□□□ -0.82
LINC01549-201ENST00000440664 DCAF8Q5TAQ9 597 aa9.91□□□□□ -0.82
LINC01549-201ENST00000440664 PYGBP11216 843 aa9.9□□□□□ -0.82
LINC01549-201ENST00000440664 HCSTQ9UBK5 93 aa9.83□□□□□ -0.84
LINC01549-201ENST00000440664 BOLA1Q9Y3E2 137 aa9.82□□□□□ -0.84
LINC01549-201ENST00000440664 DPY19L2Q6NUT2 758 aa9.81□□□□□ -0.84
LINC01549-201ENST00000440664 IRX2Q9BZI1 471 aaPredicted RBP9.8□□□□□ -0.84
LINC01549-201ENST00000440664 LSM11P83369 360 aaKnown RBP eCLIP9.78□□□□□ -0.84
LINC01549-201ENST00000440664 ZSWIM6Q9HCJ5 1215 aa9.76□□□□□ -0.85
LINC01549-201ENST00000440664 ZNF467Q7Z7K2 595 aaPredicted RBP9.72□□□□□ -0.85
LINC01549-201ENST00000440664 ILDR1Q86SU0 546 aaPredicted RBP9.72□□□□□ -0.85
LINC01549-201ENST00000440664 GPR153Q6NV75 609 aa9.69□□□□□ -0.86
LINC01549-201ENST00000440664 PSEN1P49768 467 aa9.67□□□□□ -0.86
LINC01549-201ENST00000440664 ZNF316A6NFI3 1004 aaPredicted RBP9.63□□□□□ -0.87
LINC01549-201ENST00000440664 RGS20O76081 388 aa9.63□□□□□ -0.87
LINC01549-201ENST00000440664 ARSIQ5FYB1 569 aa9.62□□□□□ -0.87
LINC01549-201ENST00000440664 PBX2P40425 430 aa9.59□□□□□ -0.87
LINC01549-201ENST00000440664 CABP2Q9NPB3 220 aa9.59□□□□□ -0.87
LINC01549-201ENST00000440664 AXIN2Q9Y2T1 843 aa9.56□□□□□ -0.88
LINC01549-201ENST00000440664 Q6ZNB5 142 aa9.55□□□□□ -0.88
LINC01549-201ENST00000440664 KHSRPQ92945 711 aaKnown RBP eCLIP9.54□□□□□ -0.88
LINC01549-201ENST00000440664 TMEM92Q6UXU6 159 aa9.53□□□□□ -0.88
LINC01549-201ENST00000440664 PDAP1Q13442 181 aaKnown RBP9.52□□□□□ -0.89
LINC01549-201ENST00000440664 ADGRD1Q6QNK2 874 aa9.5□□□□□ -0.89
LINC01549-201ENST00000440664 POTEEQ6S8J3 1075 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms