RNA–Protein interactions for RNA: ENST00000439601.1

LINC01237-204, Transcript of long intergenic non-protein coding RNA 1237, humanhuman

TSL 4

Gene LINC01237, Length 569 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01237-204ENST00000439601 CCDC61Q9Y6R9 512 aa12.89□□□□□ -0.35
LINC01237-204ENST00000439601 IFNLR1Q8IU57 520 aaPredicted RBP12.87□□□□□ -0.35
LINC01237-204ENST00000439601 FAM212AQ96EL1 285 aa12.85□□□□□ -0.35
LINC01237-204ENST00000439601 PHF12Q96QT6 1004 aa12.84□□□□□ -0.35
LINC01237-204ENST00000439601 SPOCK2Q92563 424 aa12.79□□□□□ -0.36
LINC01237-204ENST00000439601 KIF12Q96FN5 646 aa12.77□□□□□ -0.37
LINC01237-204ENST00000439601 GALR2O43603 387 aaPredicted RBP12.76□□□□□ -0.37
LINC01237-204ENST00000439601 GSE1Q14687 1217 aa12.76□□□□□ -0.37
LINC01237-204ENST00000439601 DCAF8Q5TAQ9 597 aa12.74□□□□□ -0.37
LINC01237-204ENST00000439601 SGIP1Q9BQI5 828 aa12.74□□□□□ -0.37
LINC01237-204ENST00000439601 MS4A3Q96HJ5 214 aa12.71□□□□□ -0.37
LINC01237-204ENST00000439601 DCBLD2Q96PD2 775 aa12.7□□□□□ -0.38
LINC01237-204ENST00000439601 MAP3K13O43283 966 aa12.69□□□□□ -0.38
LINC01237-204ENST00000439601 POTEIP0CG38 1075 aa12.66□□□□□ -0.38
LINC01237-204ENST00000439601 CHRM1P11229 460 aaPredicted RBP12.64□□□□□ -0.39
LINC01237-204ENST00000439601 PCDHB13Q9Y5F0 798 aa12.63□□□□□ -0.39
LINC01237-204ENST00000439601 PYGBP11216 843 aa12.6□□□□□ -0.39
LINC01237-204ENST00000439601 ASTLQ6HA08 431 aaPredicted RBP12.6□□□□□ -0.39
LINC01237-204ENST00000439601 TIE1P35590 1138 aa12.58□□□□□ -0.4
LINC01237-204ENST00000439601 TRIM41Q8WV44 630 aa12.58□□□□□ -0.4
LINC01237-204ENST00000439601 CIZ1Q9ULV3 898 aaPredicted RBP12.58□□□□□ -0.4
LINC01237-204ENST00000439601 IFNL1Q8IU54 200 aa12.57□□□□□ -0.4
LINC01237-204ENST00000439601 ATMINO43313 823 aaPredicted RBP12.55□□□□□ -0.4
LINC01237-204ENST00000439601 ZNF467Q7Z7K2 595 aaPredicted RBP12.53□□□□□ -0.4
LINC01237-204ENST00000439601 BMP2KQ9NSY1 1161 aaPredicted RBP12.52□□□□□ -0.41
LINC01237-204ENST00000439601 TRPC6Q9Y210 931 aa12.51□□□□□ -0.41
LINC01237-204ENST00000439601 CCDC180Q9P1Z9 1646 aa12.48□□□□□ -0.41
LINC01237-204ENST00000439601 TTLL13PA6NNM8 815 aa12.47□□□□□ -0.41
LINC01237-204ENST00000439601 ATN1P54259 1190 aaPredicted RBP12.47□□□□□ -0.41
LINC01237-204ENST00000439601 PELP1Q8IZL8 1130 aaKnown RBP12.47□□□□□ -0.41
LINC01237-204ENST00000439601 SLC39A7Q92504 469 aa12.46□□□□□ -0.41
LINC01237-204ENST00000439601 C7P10643 843 aa12.45□□□□□ -0.42
LINC01237-204ENST00000439601 PCDHB8Q9UN66 801 aa12.45□□□□□ -0.42
LINC01237-204ENST00000439601 TMEM106CQ9BVX2 250 aa12.42□□□□□ -0.42
LINC01237-204ENST00000439601 IER5LQ5T953 404 aa12.39□□□□□ -0.43
LINC01237-204ENST00000439601 LHX8Q68G74 356 aa12.39□□□□□ -0.43
LINC01237-204ENST00000439601 METRNQ9UJH8 293 aa12.39□□□□□ -0.43
LINC01237-204ENST00000439601 TRIM35Q9UPQ4 493 aa12.38□□□□□ -0.43
LINC01237-204ENST00000439601 PDAP1Q13442 181 aaKnown RBP12.37□□□□□ -0.43
LINC01237-204ENST00000439601 PSEN1P49768 467 aa12.35□□□□□ -0.43
LINC01237-204ENST00000439601 RIOK3O14730 519 aaKnown RBP12.32□□□□□ -0.44
LINC01237-204ENST00000439601 PKD2Q13563 968 aa12.32□□□□□ -0.44
LINC01237-204ENST00000439601 ECM2O94769 699 aaPredicted RBP12.29□□□□□ -0.44
LINC01237-204ENST00000439601 RNF25Q96BH1 459 aaPredicted RBP12.29□□□□□ -0.44
LINC01237-204ENST00000439601 TAOK2Q9UL54 1235 aa12.28□□□□□ -0.44
LINC01237-204ENST00000439601 VGFO15240 615 aaPredicted RBP12.27□□□□□ -0.45
LINC01237-204ENST00000439601 POTEFA5A3E0 1075 aa12.25□□□□□ -0.45
LINC01237-204ENST00000439601 SEC24BO95487 1268 aa12.25□□□□□ -0.45
LINC01237-204ENST00000439601 POTEB2H3BUK9 544 aa12.24□□□□□ -0.45
LINC01237-204ENST00000439601 IRX5P78411 483 aaPredicted RBP12.24□□□□□ -0.45
LINC01237-204ENST00000439601 GOLGA2Q08379 1002 aa12.24□□□□□ -0.45
LINC01237-204ENST00000439601 MKRN3Q13064 507 aaKnown RBP12.22□□□□□ -0.45
LINC01237-204ENST00000439601 COLQQ9Y215 455 aaPredicted RBP12.22□□□□□ -0.45
LINC01237-204ENST00000439601 OCEL1Q9H607 264 aa12.2□□□□□ -0.46
LINC01237-204ENST00000439601 PLCG2P16885 1265 aa12.19□□□□□ -0.46
LINC01237-204ENST00000439601 MAMSTRQ6ZN01 415 aa12.19□□□□□ -0.46
LINC01237-204ENST00000439601 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.17□□□□□ -0.46
LINC01237-204ENST00000439601 ZFP91Q96JP5 570 aaPredicted RBP12.17□□□□□ -0.46
LINC01237-204ENST00000439601 CABP2Q9NPB3 220 aa12.17□□□□□ -0.46
LINC01237-204ENST00000439601 RGL2O15211 777 aa12.16□□□□□ -0.46
LINC01237-204ENST00000439601 ILDR1Q86SU0 546 aaPredicted RBP12.16□□□□□ -0.46
LINC01237-204ENST00000439601 POTEJP0CG39 1038 aa12.14□□□□□ -0.47
LINC01237-204ENST00000439601 OTUD5Q96G74 571 aa12.14□□□□□ -0.47
LINC01237-204ENST00000439601 PDCD7Q8N8D1 485 aaKnown RBP12.11□□□□□ -0.47
LINC01237-204ENST00000439601 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.11□□□□□ -0.47
LINC01237-204ENST00000439601 SCUBE2Q9NQ36 999 aa12.1□□□□□ -0.47
LINC01237-204ENST00000439601 SOX12O15370 315 aa12.08□□□□□ -0.48
LINC01237-204ENST00000439601 EFCAB3Q8N7B9 438 aa12.08□□□□□ -0.48
LINC01237-204ENST00000439601 BCL11BQ9C0K0 894 aaPredicted RBP12.07□□□□□ -0.48
LINC01237-204ENST00000439601 STK25O00506 426 aa12.05□□□□□ -0.48
LINC01237-204ENST00000439601 L3MBTL3Q96JM7 780 aaPredicted RBP12.04□□□□□ -0.48
LINC01237-204ENST00000439601 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
LINC01237-204ENST00000439601 ZCCHC6Q5VYS8 1495 aaKnown RBP12.03□□□□□ -0.48
LINC01237-204ENST00000439601 HS6ST3Q8IZP7 471 aa11.98□□□□□ -0.49
LINC01237-204ENST00000439601 NLRP6P59044 892 aa11.96□□□□□ -0.49
LINC01237-204ENST00000439601 AMER1Q5JTC6 1135 aaPredicted RBP11.96□□□□□ -0.49
LINC01237-204ENST00000439601 DPY19L2Q6NUT2 758 aa11.95□□□□□ -0.5
LINC01237-204ENST00000439601 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.94□□□□□ -0.5
LINC01237-204ENST00000439601 PHF8Q9UPP1 1060 aa11.94□□□□□ -0.5
LINC01237-204ENST00000439601 BOLA1Q9Y3E2 137 aa11.94□□□□□ -0.5
LINC01237-204ENST00000439601 DNAJC5Q9H3Z4 198 aa11.93□□□□□ -0.5
LINC01237-204ENST00000439601 G3V3G9 751 aa11.92□□□□□ -0.5
LINC01237-204ENST00000439601 C3orf67Q6ZVT6 689 aa11.92□□□□□ -0.5
LINC01237-204ENST00000439601 FBXO22Q8NEZ5 403 aa11.92□□□□□ -0.5
LINC01237-204ENST00000439601 MS4A4AQ96JQ5 239 aa11.92□□□□□ -0.5
LINC01237-204ENST00000439601 TMEM121BQ9BXQ6 578 aaPredicted RBP11.92□□□□□ -0.5
LINC01237-204ENST00000439601 MFRPQ9BY79 579 aa11.92□□□□□ -0.5
LINC01237-204ENST00000439601 DCAF1Q9Y4B6 1507 aa11.91□□□□□ -0.5
LINC01237-204ENST00000439601 SLAIN1Q8ND83 568 aa11.9□□□□□ -0.5
LINC01237-204ENST00000439601 CHGAP10645 457 aaKnown RBP11.89□□□□□ -0.51
LINC01237-204ENST00000439601 MICALL2Q8IY33 904 aa11.83□□□□□ -0.52
LINC01237-204ENST00000439601 RTN4Q9NQC3 1192 aaKnown RBP11.81□□□□□ -0.52
LINC01237-204ENST00000439601 RYDENQ9NUL5 291 aaKnown RBP11.8□□□□□ -0.52
LINC01237-204ENST00000439601 SNPHO15079 494 aa11.78□□□□□ -0.52
LINC01237-204ENST00000439601 DCAF8L2P0C7V8 631 aa11.76□□□□□ -0.53
LINC01237-204ENST00000439601 NKX1-1Q15270 411 aaPredicted RBP11.75□□□□□ -0.53
LINC01237-204ENST00000439601 MYO15BQ96JP2 1530 aa11.74□□□□□ -0.53
LINC01237-204ENST00000439601 FAM163AQ96GL9 167 aaPredicted RBP11.71□□□□□ -0.53
LINC01237-204ENST00000439601 PPP1R37O75864 691 aa11.69□□□□□ -0.54
LINC01237-204ENST00000439601 LCE2DQ5TA82 110 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms