RNA–Protein interactions for RNA: ENST00000439346.5

CHEK2-217, Transcript of checkpoint kinase 2, humanhuman

TSL 4

Gene CHEK2, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-217ENST00000439346 RASEFQ8IZ41 740 aa14.47□□□□□ -0.09
CHEK2-217ENST00000439346 PLCD3Q8N3E9 789 aa14.43□□□□□ -0.1
CHEK2-217ENST00000439346 ATMINO43313 823 aaPredicted RBP14.41□□□□□ -0.1
CHEK2-217ENST00000439346 PLEKHG5O94827 1062 aa14.41□□□□□ -0.1
CHEK2-217ENST00000439346 KIF12Q96FN5 646 aa14.41□□□□□ -0.1
CHEK2-217ENST00000439346 OTUD5Q96G74 571 aa14.4□□□□□ -0.1
CHEK2-217ENST00000439346 TRPC6Q9Y210 931 aa14.4□□□□□ -0.1
CHEK2-217ENST00000439346 ASTLQ6HA08 431 aaPredicted RBP14.39□□□□□ -0.11
CHEK2-217ENST00000439346 MAP3K13O43283 966 aa14.36□□□□□ -0.11
CHEK2-217ENST00000439346 METRNQ9UJH8 293 aa14.35□□□□□ -0.11
CHEK2-217ENST00000439346 ATN1P54259 1190 aaPredicted RBP14.34□□□□□ -0.11
CHEK2-217ENST00000439346 POTEJP0CG39 1038 aa14.29□□□□□ -0.12
CHEK2-217ENST00000439346 BMP2KQ9NSY1 1161 aaPredicted RBP14.29□□□□□ -0.12
CHEK2-217ENST00000439346 NUBP1P53384 320 aa14.28□□□□□ -0.12
CHEK2-217ENST00000439346 SLC39A7Q92504 469 aa14.27□□□□□ -0.13
CHEK2-217ENST00000439346 C7P10643 843 aa14.25□□□□□ -0.13
CHEK2-217ENST00000439346 POTEFA5A3E0 1075 aa14.2□□□□□ -0.14
CHEK2-217ENST00000439346 PCDHB13Q9Y5F0 798 aa14.18□□□□□ -0.14
CHEK2-217ENST00000439346 ZBTB47Q9UFB7 747 aaPredicted RBP14.17□□□□□ -0.14
CHEK2-217ENST00000439346 TTLL13PA6NNM8 815 aa14.16□□□□□ -0.14
CHEK2-217ENST00000439346 TIE1P35590 1138 aa14.16□□□□□ -0.14
CHEK2-217ENST00000439346 IFNL1Q8IU54 200 aa14.13□□□□□ -0.15
CHEK2-217ENST00000439346 FAM212AQ96EL1 285 aa14.12□□□□□ -0.15
CHEK2-217ENST00000439346 COLQQ9Y215 455 aaPredicted RBP14.11□□□□□ -0.15
CHEK2-217ENST00000439346 TRIM35Q9UPQ4 493 aa14.08□□□□□ -0.16
CHEK2-217ENST00000439346 DCAF8Q5TAQ9 597 aa14.06□□□□□ -0.16
CHEK2-217ENST00000439346 PYGBP11216 843 aa14.05□□□□□ -0.16
CHEK2-217ENST00000439346 SGIP1Q9BQI5 828 aa14.05□□□□□ -0.16
CHEK2-217ENST00000439346 FBXO3Q9UK99 471 aa14.04□□□□□ -0.16
CHEK2-217ENST00000439346 SEC24BO95487 1268 aa14.02□□□□□ -0.17
CHEK2-217ENST00000439346 TMEM106CQ9BVX2 250 aa14.02□□□□□ -0.17
CHEK2-217ENST00000439346 POTEMA6NI47 508 aa14.01□□□□□ -0.17
CHEK2-217ENST00000439346 PLSCR2Q9NRY7 297 aa14.01□□□□□ -0.17
CHEK2-217ENST00000439346 VASPP50552 380 aaPredicted RBP14□□□□□ -0.17
CHEK2-217ENST00000439346 MAMSTRQ6ZN01 415 aa14□□□□□ -0.17
CHEK2-217ENST00000439346 SCUBE2Q9NQ36 999 aa13.99□□□□□ -0.17
CHEK2-217ENST00000439346 POTEGQ6S5H5 508 aa13.97□□□□□ -0.17
CHEK2-217ENST00000439346 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
CHEK2-217ENST00000439346 PCDHB8Q9UN66 801 aa13.97□□□□□ -0.17
CHEK2-217ENST00000439346 LCE2DQ5TA82 110 aaPredicted RBP13.95□□□□□ -0.18
CHEK2-217ENST00000439346 FAM163AQ96GL9 167 aaPredicted RBP13.93□□□□□ -0.18
CHEK2-217ENST00000439346 IER5LQ5T953 404 aa13.91□□□□□ -0.18
CHEK2-217ENST00000439346 PLCG2P16885 1265 aa13.83□□□□□ -0.2
CHEK2-217ENST00000439346 IRX5P78411 483 aaPredicted RBP13.83□□□□□ -0.2
CHEK2-217ENST00000439346 IFNLR1Q8IU57 520 aaPredicted RBP13.79□□□□□ -0.2
CHEK2-217ENST00000439346 GSE1Q14687 1217 aa13.78□□□□□ -0.2
CHEK2-217ENST00000439346 SLAIN1Q8ND83 568 aa13.78□□□□□ -0.2
CHEK2-217ENST00000439346 OCEL1Q9H607 264 aa13.74□□□□□ -0.21
CHEK2-217ENST00000439346 ZNF467Q7Z7K2 595 aaPredicted RBP13.7□□□□□ -0.22
CHEK2-217ENST00000439346 CIZ1Q9ULV3 898 aaPredicted RBP13.7□□□□□ -0.22
CHEK2-217ENST00000439346 SPOCK2Q92563 424 aa13.68□□□□□ -0.22
CHEK2-217ENST00000439346 CHRM1P11229 460 aaPredicted RBP13.67□□□□□ -0.22
CHEK2-217ENST00000439346 PSEN1P49768 467 aa13.67□□□□□ -0.22
CHEK2-217ENST00000439346 PDCD7Q8N8D1 485 aaKnown RBP13.65□□□□□ -0.22
CHEK2-217ENST00000439346 ST18O60284 1047 aa13.63□□□□□ -0.23
CHEK2-217ENST00000439346 GOLGA2Q08379 1002 aa13.62□□□□□ -0.23
CHEK2-217ENST00000439346 MKRN3Q13064 507 aaKnown RBP13.61□□□□□ -0.23
CHEK2-217ENST00000439346 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.58□□□□□ -0.242e-7■■□□□ 13.1
CHEK2-217ENST00000439346 PCDH10Q9P2E7 1040 aa13.58□□□□□ -0.24
CHEK2-217ENST00000439346 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.57□□□□□ -0.24
CHEK2-217ENST00000439346 PDAP1Q13442 181 aaKnown RBP13.55□□□□□ -0.24
CHEK2-217ENST00000439346 DPY19L2Q6NUT2 758 aa13.55□□□□□ -0.24
CHEK2-217ENST00000439346 CABP2Q9NPB3 220 aa13.55□□□□□ -0.24
CHEK2-217ENST00000439346 CDAN1Q8IWY9 1227 aa13.53□□□□□ -0.24
CHEK2-217ENST00000439346 C3orf67Q6ZVT6 689 aa13.49□□□□□ -0.25
CHEK2-217ENST00000439346 MARVELD3Q96A59 401 aa13.48□□□□□ -0.25
CHEK2-217ENST00000439346 L3MBTL3Q96JM7 780 aaPredicted RBP13.45□□□□□ -0.26
CHEK2-217ENST00000439346 ILDR1Q86SU0 546 aaPredicted RBP13.44□□□□□ -0.26
CHEK2-217ENST00000439346 SNPHO15079 494 aa13.38□□□□□ -0.27
CHEK2-217ENST00000439346 EFCAB3Q8N7B9 438 aa13.38□□□□□ -0.27
CHEK2-217ENST00000439346 RNF25Q96BH1 459 aaPredicted RBP13.37□□□□□ -0.27
CHEK2-217ENST00000439346 TMEM121BQ9BXQ6 578 aaPredicted RBP13.35□□□□□ -0.27
CHEK2-217ENST00000439346 BOLA1Q9Y3E2 137 aa13.35□□□□□ -0.27
CHEK2-217ENST00000439346 POTEB3A0JP26 581 aa13.29□□□□□ -0.28
CHEK2-217ENST00000439346 G3V3G9 751 aa13.29□□□□□ -0.28
CHEK2-217ENST00000439346 POTEBQ6S5H4 581 aa13.29□□□□□ -0.28
CHEK2-217ENST00000439346 TRIM41Q8WV44 630 aa13.29□□□□□ -0.28
CHEK2-217ENST00000439346 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.28□□□□□ -0.28
CHEK2-217ENST00000439346 EMP3P54852 163 aa13.28□□□□□ -0.28
CHEK2-217ENST00000439346 ZFP91Q96JP5 570 aaPredicted RBP13.28□□□□□ -0.28
CHEK2-217ENST00000439346 RIOK3O14730 519 aaKnown RBP13.26□□□□□ -0.29
CHEK2-217ENST00000439346 FAM205CA6NFA0 338 aa13.24□□□□□ -0.29
CHEK2-217ENST00000439346 HOXB3P14651 431 aaPredicted RBP13.24□□□□□ -0.29
CHEK2-217ENST00000439346 SPNS2Q8IVW8 549 aa13.21□□□□□ -0.29
CHEK2-217ENST00000439346 MS4A4AQ96JQ5 239 aa13.21□□□□□ -0.29
CHEK2-217ENST00000439346 HS3ST6Q96QI5 342 aa13.21□□□□□ -0.29
CHEK2-217ENST00000439346 PHF8Q9UPP1 1060 aa13.2□□□□□ -0.3
CHEK2-217ENST00000439346 TMEM92Q6UXU6 159 aa13.19□□□□□ -0.3
CHEK2-217ENST00000439346 MICALL2Q8IY33 904 aa13.18□□□□□ -0.3
CHEK2-217ENST00000439346 VGFO15240 615 aaPredicted RBP13.17□□□□□ -0.3
CHEK2-217ENST00000439346 MMRN1Q13201 1228 aa13.17□□□□□ -0.3
CHEK2-217ENST00000439346 KRTAP3-3Q9BYR6 98 aa13.14□□□□□ -0.31
CHEK2-217ENST00000439346 KRTAP3-2Q9BYR7 98 aa13.14□□□□□ -0.31
CHEK2-217ENST00000439346 SOX12O15370 315 aa13.12□□□□□ -0.31
CHEK2-217ENST00000439346 ZNF710Q8N1W2 664 aa13.12□□□□□ -0.31
CHEK2-217ENST00000439346 BCL11BQ9C0K0 894 aaPredicted RBP13.11□□□□□ -0.31
CHEK2-217ENST00000439346 HOXB1P14653 301 aaPredicted RBP13.08□□□□□ -0.32
CHEK2-217ENST00000439346 DOK7Q18PE1 504 aa13.07□□□□□ -0.32
CHEK2-217ENST00000439346 STK24Q9Y6E0 443 aa13.07□□□□□ -0.32
CHEK2-217ENST00000439346 FBXO22Q8NEZ5 403 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms