RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 ZBTB47Q9UFB7 747 aaPredicted RBP14.33□□□□□ -0.12
UPP2-IT1-201ENST00000439185 FBXO3Q9UK99 471 aa14.33□□□□□ -0.12
UPP2-IT1-201ENST00000439185 MS4A3Q96HJ5 214 aa14.32□□□□□ -0.12
UPP2-IT1-201ENST00000439185 KIF12Q96FN5 646 aa14.26□□□□□ -0.13
UPP2-IT1-201ENST00000439185 NUBP1P53384 320 aa14.25□□□□□ -0.13
UPP2-IT1-201ENST00000439185 MAP3K13O43283 966 aa14.19□□□□□ -0.14
UPP2-IT1-201ENST00000439185 PELP1Q8IZL8 1130 aaKnown RBP14.19□□□□□ -0.14
UPP2-IT1-201ENST00000439185 ATMINO43313 823 aaPredicted RBP14.16□□□□□ -0.14
UPP2-IT1-201ENST00000439185 VASPP50552 380 aaPredicted RBP14.16□□□□□ -0.14
UPP2-IT1-201ENST00000439185 ASTLQ6HA08 431 aaPredicted RBP14.16□□□□□ -0.14
UPP2-IT1-201ENST00000439185 FAM212AQ96EL1 285 aa14.15□□□□□ -0.14
UPP2-IT1-201ENST00000439185 TRPC6Q9Y210 931 aa14.11□□□□□ -0.15
UPP2-IT1-201ENST00000439185 KLHL34Q8N239 644 aa14.1□□□□□ -0.15
UPP2-IT1-201ENST00000439185 DCAF8Q5TAQ9 597 aa14.09□□□□□ -0.15
UPP2-IT1-201ENST00000439185 ATN1P54259 1190 aaPredicted RBP14.07□□□□□ -0.16
UPP2-IT1-201ENST00000439185 BMP2KQ9NSY1 1161 aaPredicted RBP14.07□□□□□ -0.16
UPP2-IT1-201ENST00000439185 PCDHB13Q9Y5F0 798 aa14.07□□□□□ -0.16
UPP2-IT1-201ENST00000439185 SLC39A7Q92504 469 aa14.06□□□□□ -0.16
UPP2-IT1-201ENST00000439185 POTEB2H3BUK9 544 aa14.05□□□□□ -0.16
UPP2-IT1-201ENST00000439185 SGIP1Q9BQI5 828 aa14.05□□□□□ -0.16
UPP2-IT1-201ENST00000439185 METRNQ9UJH8 293 aa14.05□□□□□ -0.16
UPP2-IT1-201ENST00000439185 C7P10643 843 aa14.04□□□□□ -0.16
UPP2-IT1-201ENST00000439185 TIE1P35590 1138 aa14.03□□□□□ -0.16
UPP2-IT1-201ENST00000439185 IFNL1Q8IU54 200 aa14□□□□□ -0.17
UPP2-IT1-201ENST00000439185 PYGBP11216 843 aa13.98□□□□□ -0.17
UPP2-IT1-201ENST00000439185 TTLL13PA6NNM8 815 aa13.97□□□□□ -0.17
UPP2-IT1-201ENST00000439185 OTUD5Q96G74 571 aa13.95□□□□□ -0.18
UPP2-IT1-201ENST00000439185 IFNLR1Q8IU57 520 aaPredicted RBP13.93□□□□□ -0.18
UPP2-IT1-201ENST00000439185 GSE1Q14687 1217 aa13.92□□□□□ -0.18
UPP2-IT1-201ENST00000439185 TMEM106CQ9BVX2 250 aa13.88□□□□□ -0.19
UPP2-IT1-201ENST00000439185 TRIM35Q9UPQ4 493 aa13.88□□□□□ -0.19
UPP2-IT1-201ENST00000439185 POTEFA5A3E0 1075 aa13.87□□□□□ -0.19
UPP2-IT1-201ENST00000439185 POTEJP0CG39 1038 aa13.87□□□□□ -0.19
UPP2-IT1-201ENST00000439185 SPOCK2Q92563 424 aa13.87□□□□□ -0.19
UPP2-IT1-201ENST00000439185 PCDHB8Q9UN66 801 aa13.86□□□□□ -0.19
UPP2-IT1-201ENST00000439185 SEC24BO95487 1268 aa13.83□□□□□ -0.2
UPP2-IT1-201ENST00000439185 COLQQ9Y215 455 aaPredicted RBP13.82□□□□□ -0.2
UPP2-IT1-201ENST00000439185 IER5LQ5T953 404 aa13.81□□□□□ -0.2
UPP2-IT1-201ENST00000439185 MAMSTRQ6ZN01 415 aa13.8□□□□□ -0.2
UPP2-IT1-201ENST00000439185 CIZ1Q9ULV3 898 aaPredicted RBP13.79□□□□□ -0.2
UPP2-IT1-201ENST00000439185 CHRM1P11229 460 aaPredicted RBP13.78□□□□□ -0.2
UPP2-IT1-201ENST00000439185 ZNF467Q7Z7K2 595 aaPredicted RBP13.75□□□□□ -0.21
UPP2-IT1-201ENST00000439185 SCUBE2Q9NQ36 999 aa13.74□□□□□ -0.21
UPP2-IT1-201ENST00000439185 PLCG2P16885 1265 aa13.68□□□□□ -0.22
UPP2-IT1-201ENST00000439185 IRX5P78411 483 aaPredicted RBP13.67□□□□□ -0.22
UPP2-IT1-201ENST00000439185 PSEN1P49768 467 aa13.65□□□□□ -0.22
UPP2-IT1-201ENST00000439185 OCEL1Q9H607 264 aa13.63□□□□□ -0.23
UPP2-IT1-201ENST00000439185 GOLGA2Q08379 1002 aa13.6□□□□□ -0.23
UPP2-IT1-201ENST00000439185 PDAP1Q13442 181 aaKnown RBP13.59□□□□□ -0.23
UPP2-IT1-201ENST00000439185 MKRN3Q13064 507 aaKnown RBP13.57□□□□□ -0.24
UPP2-IT1-201ENST00000439185 TRIM41Q8WV44 630 aa13.56□□□□□ -0.24
UPP2-IT1-201ENST00000439185 FAM163AQ96GL9 167 aaPredicted RBP13.53□□□□□ -0.24
UPP2-IT1-201ENST00000439185 SLAIN1Q8ND83 568 aa13.51□□□□□ -0.25
UPP2-IT1-201ENST00000439185 POTEMA6NI47 508 aa13.5□□□□□ -0.25
UPP2-IT1-201ENST00000439185 PDCD7Q8N8D1 485 aaKnown RBP13.5□□□□□ -0.25
UPP2-IT1-201ENST00000439185 CABP2Q9NPB3 220 aa13.49□□□□□ -0.25
UPP2-IT1-201ENST00000439185 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.49□□□□□ -0.25
UPP2-IT1-201ENST00000439185 POTEGQ6S5H5 508 aa13.47□□□□□ -0.25
UPP2-IT1-201ENST00000439185 LCE2DQ5TA82 110 aaPredicted RBP13.45□□□□□ -0.26
UPP2-IT1-201ENST00000439185 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.42□□□□□ -0.26
UPP2-IT1-201ENST00000439185 L3MBTL3Q96JM7 780 aaPredicted RBP13.41□□□□□ -0.26
UPP2-IT1-201ENST00000439185 RIOK3O14730 519 aaKnown RBP13.4□□□□□ -0.26
UPP2-IT1-201ENST00000439185 ILDR1Q86SU0 546 aaPredicted RBP13.39□□□□□ -0.27
UPP2-IT1-201ENST00000439185 RNF25Q96BH1 459 aaPredicted RBP13.39□□□□□ -0.27
UPP2-IT1-201ENST00000439185 DPY19L2Q6NUT2 758 aa13.38□□□□□ -0.27
UPP2-IT1-201ENST00000439185 C3orf67Q6ZVT6 689 aa13.35□□□□□ -0.27
UPP2-IT1-201ENST00000439185 EFCAB3Q8N7B9 438 aa13.35□□□□□ -0.27
UPP2-IT1-201ENST00000439185 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.32□□□□□ -0.28
UPP2-IT1-201ENST00000439185 VGFO15240 615 aaPredicted RBP13.32□□□□□ -0.28
UPP2-IT1-201ENST00000439185 ZFP91Q96JP5 570 aaPredicted RBP13.32□□□□□ -0.28
UPP2-IT1-201ENST00000439185 PLSCR2Q9NRY7 297 aa13.3□□□□□ -0.28
UPP2-IT1-201ENST00000439185 ST18O60284 1047 aa13.29□□□□□ -0.28
UPP2-IT1-201ENST00000439185 G3V3G9 751 aa13.27□□□□□ -0.29
UPP2-IT1-201ENST00000439185 BOLA1Q9Y3E2 137 aa13.27□□□□□ -0.29
UPP2-IT1-201ENST00000439185 SNPHO15079 494 aa13.26□□□□□ -0.29
UPP2-IT1-201ENST00000439185 ECM2O94769 699 aaPredicted RBP13.25□□□□□ -0.29
UPP2-IT1-201ENST00000439185 PCDH10Q9P2E7 1040 aa13.25□□□□□ -0.29
UPP2-IT1-201ENST00000439185 SOX12O15370 315 aa13.22□□□□□ -0.29
UPP2-IT1-201ENST00000439185 TAOK2Q9UL54 1235 aa13.21□□□□□ -0.29
UPP2-IT1-201ENST00000439185 PKD2Q13563 968 aa13.2□□□□□ -0.3
UPP2-IT1-201ENST00000439185 BCL11BQ9C0K0 894 aaPredicted RBP13.18□□□□□ -0.3
UPP2-IT1-201ENST00000439185 TMEM121BQ9BXQ6 578 aaPredicted RBP13.17□□□□□ -0.3
UPP2-IT1-201ENST00000439185 PHF8Q9UPP1 1060 aa13.17□□□□□ -0.3
UPP2-IT1-201ENST00000439185 MS4A4AQ96JQ5 239 aa13.15□□□□□ -0.3
UPP2-IT1-201ENST00000439185 STK24Q9Y6E0 443 aa13.15□□□□□ -0.3
UPP2-IT1-201ENST00000439185 RGL2O15211 777 aa13.14□□□□□ -0.31
UPP2-IT1-201ENST00000439185 CDAN1Q8IWY9 1227 aa13.13□□□□□ -0.31
UPP2-IT1-201ENST00000439185 STK25O00506 426 aa13.12□□□□□ -0.31
UPP2-IT1-201ENST00000439185 MICALL2Q8IY33 904 aa13.11□□□□□ -0.31
UPP2-IT1-201ENST00000439185 MARVELD3Q96A59 401 aa13.11□□□□□ -0.31
UPP2-IT1-201ENST00000439185 NLRP6P59044 892 aa13.09□□□□□ -0.31
UPP2-IT1-201ENST00000439185 FBXO22Q8NEZ5 403 aa13.05□□□□□ -0.32
UPP2-IT1-201ENST00000439185 HOXB3P14651 431 aaPredicted RBP13.04□□□□□ -0.32
UPP2-IT1-201ENST00000439185 MFRPQ9BY79 579 aa13.03□□□□□ -0.32
UPP2-IT1-201ENST00000439185 TMEM92Q6UXU6 159 aa13.02□□□□□ -0.33
UPP2-IT1-201ENST00000439185 EMP3P54852 163 aa13.01□□□□□ -0.33
UPP2-IT1-201ENST00000439185 ZNF710Q8N1W2 664 aa12.98□□□□□ -0.33
UPP2-IT1-201ENST00000439185 DOK7Q18PE1 504 aa12.97□□□□□ -0.33
UPP2-IT1-201ENST00000439185 FAM205CA6NFA0 338 aa12.94□□□□□ -0.34
UPP2-IT1-201ENST00000439185 POTEB3A0JP26 581 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms