RNA–Protein interactions for RNA: ENST00000437992.2

RPL9-202, Transcript of ribosomal protein L9, humanhuman

TSL 4

Gene RPL9, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL9-202ENST00000437992 CCDC61Q9Y6R9 512 aa13.89□□□□□ -0.19
RPL9-202ENST00000437992 METRNQ9UJH8 293 aa13.87□□□□□ -0.19
RPL9-202ENST00000437992 SLC39A7Q92504 469 aa13.85□□□□□ -0.19
RPL9-202ENST00000437992 C7P10643 843 aa13.83□□□□□ -0.2
RPL9-202ENST00000437992 PLEKHG5O94827 1062 aa13.82□□□□□ -0.2
RPL9-202ENST00000437992 KIF12Q96FN5 646 aa13.81□□□□□ -0.2
RPL9-202ENST00000437992 MIER1Q8N108 512 aa13.79□□□□□ -0.2
RPL9-202ENST00000437992 ATN1P54259 1190 aaPredicted RBP13.75□□□□□ -0.21
RPL9-202ENST00000437992 RASEFQ8IZ41 740 aa13.75□□□□□ -0.21
RPL9-202ENST00000437992 POTEJP0CG39 1038 aa13.74□□□□□ -0.21
RPL9-202ENST00000437992 PLSCR2Q9NRY7 297 aa13.72□□□□□ -0.21
RPL9-202ENST00000437992 MAMSTRQ6ZN01 415 aa13.71□□□□□ -0.21
RPL9-202ENST00000437992 BMP2KQ9NSY1 1161 aaPredicted RBP13.71□□□□□ -0.21
RPL9-202ENST00000437992 MAP3K13O43283 966 aa13.7□□□□□ -0.22
RPL9-202ENST00000437992 TRPC6Q9Y210 931 aa13.69□□□□□ -0.22
RPL9-202ENST00000437992 POTEMA6NI47 508 aa13.67□□□□□ -0.22
RPL9-202ENST00000437992 TIE1P35590 1138 aa13.67□□□□□ -0.22
RPL9-202ENST00000437992 PLCD3Q8N3E9 789 aa13.66□□□□□ -0.22
RPL9-202ENST00000437992 POTEGQ6S5H5 508 aa13.63□□□□□ -0.23
RPL9-202ENST00000437992 POTEFA5A3E0 1075 aa13.62□□□□□ -0.23
RPL9-202ENST00000437992 SCUBE2Q9NQ36 999 aa13.61□□□□□ -0.23
RPL9-202ENST00000437992 ZBTB47Q9UFB7 747 aaPredicted RBP13.61□□□□□ -0.23
RPL9-202ENST00000437992 SGIP1Q9BQI5 828 aa13.59□□□□□ -0.23
RPL9-202ENST00000437992 TTLL13PA6NNM8 815 aa13.58□□□□□ -0.24
RPL9-202ENST00000437992 NUBP1P53384 320 aa13.57□□□□□ -0.24
RPL9-202ENST00000437992 PCDHB13Q9Y5F0 798 aa13.54□□□□□ -0.24
RPL9-202ENST00000437992 LCE2DQ5TA82 110 aaPredicted RBP13.51□□□□□ -0.25
RPL9-202ENST00000437992 COLQQ9Y215 455 aaPredicted RBP13.51□□□□□ -0.25
RPL9-202ENST00000437992 SEC24BO95487 1268 aa13.5□□□□□ -0.25
RPL9-202ENST00000437992 FKBP8Q14318 412 aa13.5□□□□□ -0.25
RPL9-202ENST00000437992 IER5LQ5T953 404 aa13.49□□□□□ -0.25
RPL9-202ENST00000437992 FAM212AQ96EL1 285 aa13.49□□□□□ -0.25
RPL9-202ENST00000437992 TRIM35Q9UPQ4 493 aa13.49□□□□□ -0.25
RPL9-202ENST00000437992 PCDH10Q9P2E7 1040 aa13.48□□□□□ -0.25
RPL9-202ENST00000437992 IFNL1Q8IU54 200 aa13.46□□□□□ -0.25
RPL9-202ENST00000437992 FAM163AQ96GL9 167 aaPredicted RBP13.45□□□□□ -0.26
RPL9-202ENST00000437992 TMEM106CQ9BVX2 250 aa13.39□□□□□ -0.27
RPL9-202ENST00000437992 PLCG2P16885 1265 aa13.31□□□□□ -0.28
RPL9-202ENST00000437992 FBXO3Q9UK99 471 aa13.31□□□□□ -0.28
RPL9-202ENST00000437992 DCAF8Q5TAQ9 597 aa13.3□□□□□ -0.28
RPL9-202ENST00000437992 IRX5P78411 483 aaPredicted RBP13.29□□□□□ -0.28
RPL9-202ENST00000437992 PYGBP11216 843 aa13.28□□□□□ -0.28
RPL9-202ENST00000437992 SLAIN1Q8ND83 568 aa13.27□□□□□ -0.29
RPL9-202ENST00000437992 OCEL1Q9H607 264 aa13.22□□□□□ -0.29
RPL9-202ENST00000437992 PCDHB8Q9UN66 801 aa13.22□□□□□ -0.29
RPL9-202ENST00000437992 ST18O60284 1047 aa13.17□□□□□ -0.3
RPL9-202ENST00000437992 VASPP50552 380 aaPredicted RBP13.16□□□□□ -0.3
RPL9-202ENST00000437992 CDAN1Q8IWY9 1227 aa13.16□□□□□ -0.3
RPL9-202ENST00000437992 GSE1Q14687 1217 aa13.15□□□□□ -0.3
RPL9-202ENST00000437992 ZNF467Q7Z7K2 595 aaPredicted RBP13.13□□□□□ -0.31
RPL9-202ENST00000437992 KLHL34Q8N239 644 aa13.13□□□□□ -0.31
RPL9-202ENST00000437992 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.09□□□□□ -0.31
RPL9-202ENST00000437992 CHRM1P11229 460 aaPredicted RBP13.08□□□□□ -0.32
RPL9-202ENST00000437992 PDCD7Q8N8D1 485 aaKnown RBP13.07□□□□□ -0.32
RPL9-202ENST00000437992 TMEM121BQ9BXQ6 578 aaPredicted RBP13.06□□□□□ -0.32
RPL9-202ENST00000437992 SNPHO15079 494 aa13.05□□□□□ -0.32
RPL9-202ENST00000437992 GOLGA2Q08379 1002 aa13.03□□□□□ -0.32
RPL9-202ENST00000437992 MKRN3Q13064 507 aaKnown RBP13.03□□□□□ -0.32
RPL9-202ENST00000437992 PSEN1P49768 467 aa13□□□□□ -0.33
RPL9-202ENST00000437992 L3MBTL3Q96JM7 780 aaPredicted RBP12.99□□□□□ -0.33
RPL9-202ENST00000437992 C3orf67Q6ZVT6 689 aa12.98□□□□□ -0.33
RPL9-202ENST00000437992 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.96□□□□□ -0.33
RPL9-202ENST00000437992 PDAP1Q13442 181 aaKnown RBP12.94□□□□□ -0.34
RPL9-202ENST00000437992 ILDR1Q86SU0 546 aaPredicted RBP12.93□□□□□ -0.34
RPL9-202ENST00000437992 MARVELD3Q96A59 401 aa12.92□□□□□ -0.34
RPL9-202ENST00000437992 SPOCK2Q92563 424 aa12.91□□□□□ -0.34
RPL9-202ENST00000437992 IFNLR1Q8IU57 520 aaPredicted RBP12.89□□□□□ -0.35
RPL9-202ENST00000437992 CIZ1Q9ULV3 898 aaPredicted RBP12.86□□□□□ -0.35
RPL9-202ENST00000437992 SPNS2Q8IVW8 549 aa12.85□□□□□ -0.35
RPL9-202ENST00000437992 CABP2Q9NPB3 220 aa12.84□□□□□ -0.35
RPL9-202ENST00000437992 EMP3P54852 163 aa12.83□□□□□ -0.36
RPL9-202ENST00000437992 MMRN1Q13201 1228 aa12.83□□□□□ -0.36
RPL9-202ENST00000437992 DPY19L2Q6NUT2 758 aa12.82□□□□□ -0.36
RPL9-202ENST00000437992 BOLA1Q9Y3E2 137 aa12.78□□□□□ -0.36
RPL9-202ENST00000437992 G3V3G9 751 aa12.76□□□□□ -0.37
RPL9-202ENST00000437992 HS3ST6Q96QI5 342 aa12.74□□□□□ -0.37
RPL9-202ENST00000437992 POTEB3A0JP26 581 aa12.73□□□□□ -0.37
RPL9-202ENST00000437992 POTEBQ6S5H4 581 aa12.73□□□□□ -0.37
RPL9-202ENST00000437992 FAM205CA6NFA0 338 aa12.72□□□□□ -0.37
RPL9-202ENST00000437992 TRIM41Q8WV44 630 aa12.72□□□□□ -0.37
RPL9-202ENST00000437992 KRTAP3-3Q9BYR6 98 aa12.71□□□□□ -0.37
RPL9-202ENST00000437992 KRTAP3-2Q9BYR7 98 aa12.71□□□□□ -0.37
RPL9-202ENST00000437992 HOXB3P14651 431 aaPredicted RBP12.7□□□□□ -0.38
RPL9-202ENST00000437992 EFCAB3Q8N7B9 438 aa12.66□□□□□ -0.38
RPL9-202ENST00000437992 HOXB1P14653 301 aaPredicted RBP12.63□□□□□ -0.39
RPL9-202ENST00000437992 DOK7Q18PE1 504 aa12.62□□□□□ -0.39
RPL9-202ENST00000437992 ZNF710Q8N1W2 664 aa12.62□□□□□ -0.39
RPL9-202ENST00000437992 MICALL2Q8IY33 904 aa12.56□□□□□ -0.4
RPL9-202ENST00000437992 RIOK3O14730 519 aaKnown RBP12.55□□□□□ -0.4
RPL9-202ENST00000437992 RIMBP2O15034 1052 aa12.54□□□□□ -0.4
RPL9-202ENST00000437992 SOX12O15370 315 aa12.54□□□□□ -0.4
RPL9-202ENST00000437992 RNF25Q96BH1 459 aaPredicted RBP12.54□□□□□ -0.4
RPL9-202ENST00000437992 ERBB3P21860 1342 aa12.53□□□□□ -0.4
RPL9-202ENST00000437992 TMEM92Q6UXU6 159 aa12.52□□□□□ -0.41
RPL9-202ENST00000437992 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.5□□□□□ -0.41
RPL9-202ENST00000437992 VGFO15240 615 aaPredicted RBP12.5□□□□□ -0.41
RPL9-202ENST00000437992 ZFP91Q96JP5 570 aaPredicted RBP12.5□□□□□ -0.41
RPL9-202ENST00000437992 MS4A4AQ96JQ5 239 aa12.5□□□□□ -0.41
RPL9-202ENST00000437992 ZSWIM6Q9HCJ5 1215 aa12.49□□□□□ -0.41
RPL9-202ENST00000437992 VARS2Q5ST30 1063 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms