RNA–Protein interactions for RNA: ENST00000437765.1

YIPF4-202, Transcript of Yip1 domain family member 4, humanhuman

TSL 5

Gene YIPF4, Length 728 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-202ENST00000437765 GSE1Q14687 1217 aa13.94□□□□□ -0.18
YIPF4-202ENST00000437765 ZNF579Q8NAF0 562 aaKnown RBP13.94□□□□□ -0.18
YIPF4-202ENST00000437765 CIZ1Q9ULV3 898 aaPredicted RBP13.93□□□□□ -0.18
YIPF4-202ENST00000437765 PHF12Q96QT6 1004 aa13.92□□□□□ -0.18
YIPF4-202ENST00000437765 PAK3O75914 559 aaPredicted RBP13.91□□□□□ -0.18
YIPF4-202ENST00000437765 RTN4Q9NQC3 1192 aaKnown RBP13.9□□□□□ -0.18
YIPF4-202ENST00000437765 PYGBP11216 843 aa13.86□□□□□ -0.19
YIPF4-202ENST00000437765 KIF12Q96FN5 646 aa13.86□□□□□ -0.19
YIPF4-202ENST00000437765 CHRM1P11229 460 aaPredicted RBP13.83□□□□□ -0.2
YIPF4-202ENST00000437765 AMER1Q5JTC6 1135 aaPredicted RBP13.82□□□□□ -0.2
YIPF4-202ENST00000437765 SP7Q8TDD2 431 aaPredicted RBP13.82□□□□□ -0.2
YIPF4-202ENST00000437765 MAP3K13O43283 966 aa13.81□□□□□ -0.2
YIPF4-202ENST00000437765 GABBR2O75899 941 aa13.78□□□□□ -0.2
YIPF4-202ENST00000437765 RNF25Q96BH1 459 aaPredicted RBP13.78□□□□□ -0.2
YIPF4-202ENST00000437765 TRIM41Q8WV44 630 aa13.77□□□□□ -0.21
YIPF4-202ENST00000437765 ECM2O94769 699 aaPredicted RBP13.76□□□□□ -0.21
YIPF4-202ENST00000437765 MS4A3Q96HJ5 214 aa13.76□□□□□ -0.21
YIPF4-202ENST00000437765 GALR2O43603 387 aaPredicted RBP13.75□□□□□ -0.21
YIPF4-202ENST00000437765 RGL2O15211 777 aa13.72□□□□□ -0.21
YIPF4-202ENST00000437765 IFNL1Q8IU54 200 aa13.72□□□□□ -0.21
YIPF4-202ENST00000437765 SGIP1Q9BQI5 828 aa13.72□□□□□ -0.21
YIPF4-202ENST00000437765 TRPC6Q9Y210 931 aa13.71□□□□□ -0.21
YIPF4-202ENST00000437765 PCDHB13Q9Y5F0 798 aa13.71□□□□□ -0.21
YIPF4-202ENST00000437765 PCDHB8Q9UN66 801 aa13.7□□□□□ -0.22
YIPF4-202ENST00000437765 CLCN6P51797 869 aa13.68□□□□□ -0.22
YIPF4-202ENST00000437765 ZNF467Q7Z7K2 595 aaPredicted RBP13.62□□□□□ -0.23
YIPF4-202ENST00000437765 RIOK3O14730 519 aaKnown RBP13.61□□□□□ -0.23
YIPF4-202ENST00000437765 POTEIP0CG38 1075 aa13.58□□□□□ -0.24
YIPF4-202ENST00000437765 BMP2KQ9NSY1 1161 aaPredicted RBP13.55□□□□□ -0.24
YIPF4-202ENST00000437765 TIE1P35590 1138 aa13.53□□□□□ -0.24
YIPF4-202ENST00000437765 PSEN1P49768 467 aa13.52□□□□□ -0.25
YIPF4-202ENST00000437765 PDAP1Q13442 181 aaKnown RBP13.52□□□□□ -0.25
YIPF4-202ENST00000437765 TTLL13PA6NNM8 815 aa13.51□□□□□ -0.25
YIPF4-202ENST00000437765 VGFO15240 615 aaPredicted RBP13.51□□□□□ -0.25
YIPF4-202ENST00000437765 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.5□□□□□ -0.25
YIPF4-202ENST00000437765 ATMINO43313 823 aaPredicted RBP13.5□□□□□ -0.25
YIPF4-202ENST00000437765 ASTLQ6HA08 431 aaPredicted RBP13.5□□□□□ -0.25
YIPF4-202ENST00000437765 ZFP91Q96JP5 570 aaPredicted RBP13.5□□□□□ -0.25
YIPF4-202ENST00000437765 ATN1P54259 1190 aaPredicted RBP13.47□□□□□ -0.25
YIPF4-202ENST00000437765 PELP1Q8IZL8 1130 aaKnown RBP13.47□□□□□ -0.25
YIPF4-202ENST00000437765 TMEM106CQ9BVX2 250 aa13.47□□□□□ -0.25
YIPF4-202ENST00000437765 DCBLD2Q96PD2 775 aa13.44□□□□□ -0.26
YIPF4-202ENST00000437765 TRIM35Q9UPQ4 493 aa13.4□□□□□ -0.26
YIPF4-202ENST00000437765 BCL11BQ9C0K0 894 aaPredicted RBP13.39□□□□□ -0.27
YIPF4-202ENST00000437765 HS6ST3Q8IZP7 471 aa13.38□□□□□ -0.27
YIPF4-202ENST00000437765 STK25O00506 426 aa13.37□□□□□ -0.27
YIPF4-202ENST00000437765 TAOK2Q9UL54 1235 aa13.37□□□□□ -0.27
YIPF4-202ENST00000437765 DCAF8L2P0C7V8 631 aa13.36□□□□□ -0.27
YIPF4-202ENST00000437765 CHGAP10645 457 aaKnown RBP13.36□□□□□ -0.27
YIPF4-202ENST00000437765 CABP2Q9NPB3 220 aa13.35□□□□□ -0.27
YIPF4-202ENST00000437765 STK24Q9Y6E0 443 aa13.35□□□□□ -0.27
YIPF4-202ENST00000437765 EFCAB3Q8N7B9 438 aa13.31□□□□□ -0.28
YIPF4-202ENST00000437765 DNAJC5Q9H3Z4 198 aa13.31□□□□□ -0.28
YIPF4-202ENST00000437765 POTEFA5A3E0 1075 aa13.3□□□□□ -0.28
YIPF4-202ENST00000437765 NKX1-1Q15270 411 aaPredicted RBP13.29□□□□□ -0.28
YIPF4-202ENST00000437765 ILDR1Q86SU0 546 aaPredicted RBP13.27□□□□□ -0.29
YIPF4-202ENST00000437765 IRX5P78411 483 aaPredicted RBP13.25□□□□□ -0.29
YIPF4-202ENST00000437765 IER5LQ5T953 404 aa13.25□□□□□ -0.29
YIPF4-202ENST00000437765 SLC39A7Q92504 469 aa13.25□□□□□ -0.29
YIPF4-202ENST00000437765 COLQQ9Y215 455 aaPredicted RBP13.24□□□□□ -0.29
YIPF4-202ENST00000437765 METRNQ9UJH8 293 aa13.23□□□□□ -0.29
YIPF4-202ENST00000437765 C7P10643 843 aa13.22□□□□□ -0.29
YIPF4-202ENST00000437765 MFRPQ9BY79 579 aa13.22□□□□□ -0.29
YIPF4-202ENST00000437765 MKRN3Q13064 507 aaKnown RBP13.21□□□□□ -0.29
YIPF4-202ENST00000437765 FBXO22Q8NEZ5 403 aa13.2□□□□□ -0.3
YIPF4-202ENST00000437765 PHF8Q9UPP1 1060 aa13.2□□□□□ -0.3
YIPF4-202ENST00000437765 SOX12O15370 315 aa13.19□□□□□ -0.3
YIPF4-202ENST00000437765 GOLGA2Q08379 1002 aa13.19□□□□□ -0.3
YIPF4-202ENST00000437765 PDCD7Q8N8D1 485 aaKnown RBP13.19□□□□□ -0.3
YIPF4-202ENST00000437765 MS4A4AQ96JQ5 239 aa13.19□□□□□ -0.3
YIPF4-202ENST00000437765 BBXQ8WY36 941 aaPredicted RBP13.17□□□□□ -0.3
YIPF4-202ENST00000437765 POTEB2H3BUK9 544 aa13.16□□□□□ -0.3
YIPF4-202ENST00000437765 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.16□□□□□ -0.32e-7■■□□□ 11.6
YIPF4-202ENST00000437765 DPY19L2Q6NUT2 758 aa13.14□□□□□ -0.31
YIPF4-202ENST00000437765 OCEL1Q9H607 264 aa13.14□□□□□ -0.31
YIPF4-202ENST00000437765 GTPBP6O43824 516 aaPredicted RBP13.11□□□□□ -0.31
YIPF4-202ENST00000437765 POTEJP0CG39 1038 aa13.11□□□□□ -0.31
YIPF4-202ENST00000437765 NLRP6P59044 892 aa13.1□□□□□ -0.31
YIPF4-202ENST00000437765 SEC24BO95487 1268 aa13.09□□□□□ -0.31
YIPF4-202ENST00000437765 PLCG2P16885 1265 aa13.09□□□□□ -0.31
YIPF4-202ENST00000437765 PPP1R37O75864 691 aa13.07□□□□□ -0.32
YIPF4-202ENST00000437765 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.98□□□□□ -0.33
YIPF4-202ENST00000437765 PAXIP1Q6ZW49 1069 aaPredicted RBP12.97□□□□□ -0.33
YIPF4-202ENST00000437765 TMEM121BQ9BXQ6 578 aaPredicted RBP12.97□□□□□ -0.33
YIPF4-202ENST00000437765 LHX8Q68G74 356 aa12.96□□□□□ -0.33
YIPF4-202ENST00000437765 SPRYD3Q8NCJ5 442 aa12.96□□□□□ -0.33
YIPF4-202ENST00000437765 MICALL2Q8IY33 904 aa12.94□□□□□ -0.34
YIPF4-202ENST00000437765 BOLA1Q9Y3E2 137 aa12.94□□□□□ -0.34
YIPF4-202ENST00000437765 CFAP44Q96MT7 982 aa12.93□□□□□ -0.34
YIPF4-202ENST00000437765 RYDENQ9NUL5 291 aaKnown RBP12.93□□□□□ -0.34
YIPF4-202ENST00000437765 L3MBTL3Q96JM7 780 aaPredicted RBP12.91□□□□□ -0.34
YIPF4-202ENST00000437765 PLCB2Q00722 1185 aa12.9□□□□□ -0.34
YIPF4-202ENST00000437765 OTUD5Q96G74 571 aa12.9□□□□□ -0.34
YIPF4-202ENST00000437765 TMEM92Q6UXU6 159 aa12.86□□□□□ -0.35
YIPF4-202ENST00000437765 CADPS2Q86UW7 1296 aa12.84□□□□□ -0.35
YIPF4-202ENST00000437765 TSHZ2Q9NRE2 1034 aa12.79□□□□□ -0.36
YIPF4-202ENST00000437765 MAMSTRQ6ZN01 415 aa12.78□□□□□ -0.36
YIPF4-202ENST00000437765 G3V3G9 751 aa12.77□□□□□ -0.37
YIPF4-202ENST00000437765 KIF3CO14782 793 aa12.77□□□□□ -0.37
YIPF4-202ENST00000437765 C3orf67Q6ZVT6 689 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms