RNA–Protein interactions for RNA: ENST00000436792.6

VPS8-207, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene VPS8, Length 5,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-207ENST00000436792 MEX3CQ5U5Q3 659 aaKnown RBP12.32□□□□□ -0.44
VPS8-207ENST00000436792 ANP32CO43423 234 aa12.32□□□□□ -0.44
VPS8-207ENST00000436792 CDCA8Q53HL2 280 aa12.32□□□□□ -0.44
VPS8-207ENST00000436792 YTHDC1Q96MU7 727 aaKnown RBP12.32□□□□□ -0.44
VPS8-207ENST00000436792 BCL11AQ9H165 835 aa12.32□□□□□ -0.44
VPS8-207ENST00000436792 CDK11BP21127 795 aaKnown RBP12.3□□□□□ -0.44
VPS8-207ENST00000436792 CECR2Q9BXF3 1484 aa12.29□□□□□ -0.44
VPS8-207ENST00000436792 CYB5RLQ6IPT4 315 aa12.28□□□□□ -0.44
VPS8-207ENST00000436792 GOLGA2Q08379 1002 aa12.26□□□□□ -0.45
VPS8-207ENST00000436792 CFAP53Q96M91 514 aa12.25□□□□□ -0.45
VPS8-207ENST00000436792 TONSLQ96HA7 1378 aa12.25□□□□□ -0.45
VPS8-207ENST00000436792 CLIP1P30622 1438 aa12.24□□□□□ -0.45
VPS8-207ENST00000436792 CHIC2Q9UKJ5 165 aa12.24□□□□□ -0.45
VPS8-207ENST00000436792 EFCAB2Q5VUJ9 269 aa12.23□□□□□ -0.45
VPS8-207ENST00000436792 KIF27Q86VH2 1401 aa12.22□□□□□ -0.45
VPS8-207ENST00000436792 SF3B2Q13435 895 aaKnown RBP12.21□□□□□ -0.45
VPS8-207ENST00000436792 TMC1Q8TDI8 760 aa12.21□□□□□ -0.45
VPS8-207ENST00000436792 MYH16Q9H6N6 1097 aa12.21□□□□□ -0.45
VPS8-207ENST00000436792 CSB-PGBD3P0DP91 1061 aa12.2□□□□□ -0.46
VPS8-207ENST00000436792 WDR43Q15061 677 aaKnown RBP eCLIP12.2□□□□□ -0.46
VPS8-207ENST00000436792 LOC105371045A0A1W2PR82 267 aa12.18□□□□□ -0.46
VPS8-207ENST00000436792 KDM2AQ9Y2K7 1162 aa12.17□□□□□ -0.46
VPS8-207ENST00000436792 GGT6Q6P531 493 aa12.17□□□□□ -0.46
VPS8-207ENST00000436792 WRNQ14191 1432 aaPredicted RBP eCLIP12.16□□□□□ -0.46
VPS8-207ENST00000436792 HMGB2P26583 209 aaKnown RBP12.15□□□□□ -0.46
VPS8-207ENST00000436792 CHMP4AQ9BY43 222 aa12.15□□□□□ -0.46
VPS8-207ENST00000436792 NUDCQ9Y266 331 aa12.15□□□□□ -0.47
VPS8-207ENST00000436792 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.14□□□□□ -0.47
VPS8-207ENST00000436792 PNNQ9H307 717 aaKnown RBP12.13□□□□□ -0.47
VPS8-207ENST00000436792 CCNB3Q8WWL7 1395 aa12.12□□□□□ -0.47
VPS8-207ENST00000436792 G3V3G9 751 aa12.12□□□□□ -0.47
VPS8-207ENST00000436792 DCAF8Q5TAQ9 597 aa12.12□□□□□ -0.47
VPS8-207ENST00000436792 ZCCHC6Q5VYS8 1495 aaKnown RBP12.1□□□□□ -0.47
VPS8-207ENST00000436792 WASHC2AQ641Q2 1341 aa12.08□□□□□ -0.48
VPS8-207ENST00000436792 EEA1Q15075 1411 aa12.08□□□□□ -0.48
VPS8-207ENST00000436792 PPM1GO15355 546 aaPredicted RBP12.08□□□□□ -0.48
VPS8-207ENST00000436792 PAK3O75914 559 aaPredicted RBP12.07□□□□□ -0.48
VPS8-207ENST00000436792 FAM69CQ0P6D2 419 aa12.06□□□□□ -0.48
VPS8-207ENST00000436792 RGL3Q3MIN7 710 aa12.06□□□□□ -0.48
VPS8-207ENST00000436792 UPF2Q9HAU5 1272 aaKnown RBP12.06□□□□□ -0.48
VPS8-207ENST00000436792 SMARCA2P51531 1590 aa12.05□□□□□ -0.48
VPS8-207ENST00000436792 MAPK8IP3Q9UPT6 1336 aa12.05□□□□□ -0.48
VPS8-207ENST00000436792 SRPK2P78362 688 aaKnown RBP12.04□□□□□ -0.48
VPS8-207ENST00000436792 EIF5BO60841 1220 aaKnown RBP12.04□□□□□ -0.48
VPS8-207ENST00000436792 MSH5O43196 834 aa12.04□□□□□ -0.48
VPS8-207ENST00000436792 HSP90AA1P07900 732 aaKnown RBP12.04□□□□□ -0.48
VPS8-207ENST00000436792 EIF4G1Q04637 1599 aaKnown RBP12.03□□□□□ -0.48
VPS8-207ENST00000436792 RSPH4AQ5TD94 716 aa12.03□□□□□ -0.48
VPS8-207ENST00000436792 ANO8Q9HCE9 1232 aaPredicted RBP12.03□□□□□ -0.48
VPS8-207ENST00000436792 EVA1CP58658 441 aa12.02□□□□□ -0.48
VPS8-207ENST00000436792 RTL5Q5HYW3 569 aaPredicted RBP12.02□□□□□ -0.48
VPS8-207ENST00000436792 HDGFL2Q7Z4V5 671 aaPredicted RBP12.02□□□□□ -0.49
VPS8-207ENST00000436792 BAZ1AQ9NRL2 1556 aaPredicted RBP12.01□□□□□ -0.49
VPS8-207ENST00000436792 KNSTRNQ9Y448 316 aa12.01□□□□□ -0.49
VPS8-207ENST00000436792 CHMP4BQ9H444 224 aaKnown RBP12□□□□□ -0.49
VPS8-207ENST00000436792 CEP164Q9UPV0 1460 aa12□□□□□ -0.49
VPS8-207ENST00000436792 RRP7BPQ9NSQ0 103 aa12□□□□□ -0.49
VPS8-207ENST00000436792 WASHC2CQ9Y4E1 1318 aa12□□□□□ -0.49
VPS8-207ENST00000436792 GTF2E1P29083 439 aaPredicted RBP11.99□□□□□ -0.49
VPS8-207ENST00000436792 SOGA1O94964 1423 aa11.99□□□□□ -0.49
VPS8-207ENST00000436792 ATF3P18847 181 aa11.98□□□□□ -0.49
VPS8-207ENST00000436792 NGDNQ8NEJ9 315 aaKnown RBP11.97□□□□□ -0.49
VPS8-207ENST00000436792 DMRT2Q9Y5R5 561 aa11.97□□□□□ -0.49
VPS8-207ENST00000436792 FHAD1B1AJZ9 1412 aa11.97□□□□□ -0.49
VPS8-207ENST00000436792 RTF1Q92541 710 aaKnown RBP11.97□□□□□ -0.49
VPS8-207ENST00000436792 CARMIL1Q5VZK9 1371 aa11.96□□□□□ -0.49
VPS8-207ENST00000436792 KRI1Q8N9T8 703 aaKnown RBP11.96□□□□□ -0.49
VPS8-207ENST00000436792 SPAG9O60271 1321 aaKnown RBP11.96□□□□□ -0.5
VPS8-207ENST00000436792 ABCC8Q09428 1581 aa11.96□□□□□ -0.5
VPS8-207ENST00000436792 KLHL34Q8N239 644 aa11.95□□□□□ -0.5
VPS8-207ENST00000436792 JPH4Q96JJ6 628 aa11.95□□□□□ -0.5
VPS8-207ENST00000436792 ISY1Q9ULR0 285 aaKnown RBP11.95□□□□□ -0.5
VPS8-207ENST00000436792 CADPSQ9ULU8 1353 aa11.95□□□□□ -0.5
VPS8-207ENST00000436792 CUX2O14529 1486 aa11.94□□□□□ -0.5
VPS8-207ENST00000436792 HDAC5Q9UQL6 1122 aa11.94□□□□□ -0.5
VPS8-207ENST00000436792 KIF3BO15066 747 aa11.92□□□□□ -0.5
VPS8-207ENST00000436792 CEP162Q5TB80 1403 aa11.92□□□□□ -0.5
VPS8-207ENST00000436792 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.92□□□□□ -0.5
VPS8-207ENST00000436792 POGZQ7Z3K3 1410 aa11.91□□□□□ -0.5
VPS8-207ENST00000436792 OS9Q13438 667 aaPredicted RBP11.91□□□□□ -0.5
VPS8-207ENST00000436792 ANP32BQ92688 251 aaKnown RBP11.9□□□□□ -0.5
VPS8-207ENST00000436792 SOX12O15370 315 aa11.9□□□□□ -0.5
VPS8-207ENST00000436792 PTPRGP23470 1445 aa11.9□□□□□ -0.5
VPS8-207ENST00000436792 ZNF330Q9Y3S2 320 aaPredicted RBP11.89□□□□□ -0.51
VPS8-207ENST00000436792 TDRD9Q8NDG6 1382 aaKnown RBP11.89□□□□□ -0.51
VPS8-207ENST00000436792 CASC1Q6TDU7 716 aa11.87□□□□□ -0.51
VPS8-207ENST00000436792 STK26Q9P289 416 aa11.87□□□□□ -0.51
VPS8-207ENST00000436792 CARD11Q9BXL7 1154 aa11.87□□□□□ -0.51
VPS8-207ENST00000436792 GOLGA3Q08378 1498 aa11.87□□□□□ -0.51
VPS8-207ENST00000436792 CWC22Q9HCG8 908 aaKnown RBP11.86□□□□□ -0.51
VPS8-207ENST00000436792 MS4A1P11836 297 aa11.85□□□□□ -0.51
VPS8-207ENST00000436792 TULP1O00294 542 aaPredicted RBP11.84□□□□□ -0.51
VPS8-207ENST00000436792 CALD1Q05682 793 aaKnown RBP11.84□□□□□ -0.51
VPS8-207ENST00000436792 TMF1P82094 1093 aa11.84□□□□□ -0.51
VPS8-207ENST00000436792 ZRSR1Q15695 479 aaKnown RBP11.84□□□□□ -0.51
VPS8-207ENST00000436792 TERF2IPQ9NYB0 399 aa11.84□□□□□ -0.51
VPS8-207ENST00000436792 HRCP23327 699 aa11.83□□□□□ -0.52
VPS8-207ENST00000436792 U2SURPO15042 1029 aaKnown RBP11.82□□□□□ -0.52
VPS8-207ENST00000436792 TAF7LQ5H9L4 462 aa11.82□□□□□ -0.52
VPS8-207ENST00000436792 LAS1LQ9Y4W2 734 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms