RNA–Protein interactions for RNA: ENST00000436262.1

LINC02238-202, Transcript of long intergenic non-protein coding RNA 2238, humanhuman

TSL 3 BASIC

Gene LINC02238, Length 320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02238-202ENST00000436262 CREBZFQ9NS37 354 aa10.14□□□□□ -0.79
LINC02238-202ENST00000436262 MMRN1Q13201 1228 aa10.13□□□□□ -0.79
LINC02238-202ENST00000436262 PAK3O75914 559 aaPredicted RBP10.09□□□□□ -0.79
LINC02238-202ENST00000436262 SLC4A1APQ9BWU0 796 aaKnown RBP10.09□□□□□ -0.79
LINC02238-202ENST00000436262 SPNS2Q8IVW8 549 aa10.07□□□□□ -0.8
LINC02238-202ENST00000436262 ZBTB22O15209 634 aa10.04□□□□□ -0.8
LINC02238-202ENST00000436262 MS4A3Q96HJ5 214 aa10.03□□□□□ -0.8
LINC02238-202ENST00000436262 POTEFA5A3E0 1075 aa10.02□□□□□ -0.81
LINC02238-202ENST00000436262 ATN1P54259 1190 aaPredicted RBP9.98□□□□□ -0.81
LINC02238-202ENST00000436262 ST18O60284 1047 aa9.95□□□□□ -0.82
LINC02238-202ENST00000436262 NPM1P06748 294 aaKnown RBP eCLIP9.88□□□□□ -0.83
LINC02238-202ENST00000436262 STAG3Q9UJ98 1225 aa9.88□□□□□ -0.83
LINC02238-202ENST00000436262 MNX1P50219 401 aaPredicted RBP9.87□□□□□ -0.83
LINC02238-202ENST00000436262 BMP2KQ9NSY1 1161 aaPredicted RBP9.82□□□□□ -0.84
LINC02238-202ENST00000436262 COLQQ9Y215 455 aaPredicted RBP9.82□□□□□ -0.84
LINC02238-202ENST00000436262 SLAIN1Q8ND83 568 aa9.77□□□□□ -0.85
LINC02238-202ENST00000436262 TMEM121BQ9BXQ6 578 aaPredicted RBP9.77□□□□□ -0.85
LINC02238-202ENST00000436262 SEC24BO95487 1268 aa9.74□□□□□ -0.85
LINC02238-202ENST00000436262 TRPC6Q9Y210 931 aa9.74□□□□□ -0.85
LINC02238-202ENST00000436262 TIE1P35590 1138 aa9.73□□□□□ -0.85
LINC02238-202ENST00000436262 KIF12Q96FN5 646 aa9.72□□□□□ -0.85
LINC02238-202ENST00000436262 CCDC61Q9Y6R9 512 aa9.72□□□□□ -0.85
LINC02238-202ENST00000436262 IER5LQ5T953 404 aa9.66□□□□□ -0.86
LINC02238-202ENST00000436262 TTLL13PA6NNM8 815 aa9.64□□□□□ -0.87
LINC02238-202ENST00000436262 MARVELD3Q96A59 401 aa9.64□□□□□ -0.87
LINC02238-202ENST00000436262 TSPYL2Q9H2G4 693 aaPredicted RBP9.64□□□□□ -0.87
LINC02238-202ENST00000436262 KRTAP3-3Q9BYR6 98 aa9.63□□□□□ -0.87
LINC02238-202ENST00000436262 KRTAP3-2Q9BYR7 98 aa9.63□□□□□ -0.87
LINC02238-202ENST00000436262 SNPHO15079 494 aa9.6□□□□□ -0.87
LINC02238-202ENST00000436262 MAP3K13O43283 966 aa9.59□□□□□ -0.87
LINC02238-202ENST00000436262 TRIM35Q9UPQ4 493 aa9.56□□□□□ -0.88
LINC02238-202ENST00000436262 POTEB3A0JP26 581 aa9.53□□□□□ -0.88
LINC02238-202ENST00000436262 POTEBQ6S5H4 581 aa9.53□□□□□ -0.88
LINC02238-202ENST00000436262 EMP3P54852 163 aa9.49□□□□□ -0.89
LINC02238-202ENST00000436262 HS3ST6Q96QI5 342 aa9.49□□□□□ -0.89
LINC02238-202ENST00000436262 PLCG2P16885 1265 aa9.45□□□□□ -0.9
LINC02238-202ENST00000436262 IRX5P78411 483 aaPredicted RBP9.44□□□□□ -0.9
LINC02238-202ENST00000436262 SGIP1Q9BQI5 828 aa9.42□□□□□ -0.9
LINC02238-202ENST00000436262 FAM205CA6NFA0 338 aa9.41□□□□□ -0.9
LINC02238-202ENST00000436262 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.41□□□□□ -0.9
LINC02238-202ENST00000436262 SPDYE4A6NLX3 237 aa9.39□□□□□ -0.91
LINC02238-202ENST00000436262 RNF166Q96A37 237 aaPredicted RBP9.39□□□□□ -0.91
LINC02238-202ENST00000436262 RASEFQ8IZ41 740 aa9.34□□□□□ -0.91
LINC02238-202ENST00000436262 OCEL1Q9H607 264 aa9.34□□□□□ -0.91
LINC02238-202ENST00000436262 PCDHB13Q9Y5F0 798 aa9.34□□□□□ -0.91
LINC02238-202ENST00000436262 TMEM106CQ9BVX2 250 aa9.32□□□□□ -0.92
LINC02238-202ENST00000436262 IFNL1Q8IU54 200 aa9.28□□□□□ -0.92
LINC02238-202ENST00000436262 MYT1LQ9UL68 1186 aa9.26□□□□□ -0.93
LINC02238-202ENST00000436262 C3orf67Q6ZVT6 689 aa9.17□□□□□ -0.94
LINC02238-202ENST00000436262 PDCD7Q8N8D1 485 aaKnown RBP9.14□□□□□ -0.95
LINC02238-202ENST00000436262 HOXB3P14651 431 aaPredicted RBP9.12□□□□□ -0.95
LINC02238-202ENST00000436262 HOXB1P14653 301 aaPredicted RBP9.12□□□□□ -0.95
LINC02238-202ENST00000436262 L3MBTL3Q96JM7 780 aaPredicted RBP9.11□□□□□ -0.95
LINC02238-202ENST00000436262 PLEKHG5O94827 1062 aa9.1□□□□□ -0.95
LINC02238-202ENST00000436262 PTGER2P43116 358 aa9.1□□□□□ -0.95
LINC02238-202ENST00000436262 PROM2Q8N271 834 aa9.1□□□□□ -0.95
LINC02238-202ENST00000436262 ERBB3P21860 1342 aa9.09□□□□□ -0.95
LINC02238-202ENST00000436262 MIER1Q8N108 512 aa9.06□□□□□ -0.96
LINC02238-202ENST00000436262 NUBP1P53384 320 aa9.05□□□□□ -0.96
LINC02238-202ENST00000436262 PLA2G2EQ9NZK7 142 aa9.02□□□□□ -0.97
LINC02238-202ENST00000436262 VARS2Q5ST30 1063 aaKnown RBP9.01□□□□□ -0.97
LINC02238-202ENST00000436262 ZNF687Q8N1G0 1237 aa9.01□□□□□ -0.97
LINC02238-202ENST00000436262 ZNF710Q8N1W2 664 aa8.99□□□□□ -0.97
LINC02238-202ENST00000436262 DOK7Q18PE1 504 aa8.94□□□□□ -0.98
LINC02238-202ENST00000436262 FAM212AQ96EL1 285 aa8.94□□□□□ -0.98
LINC02238-202ENST00000436262 ILDR1Q86SU0 546 aaPredicted RBP8.92□□□□□ -0.98
LINC02238-202ENST00000436262 MKRN3Q13064 507 aaKnown RBP8.91□□□□□ -0.98
LINC02238-202ENST00000436262 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.91□□□□□ -0.98
LINC02238-202ENST00000436262 PCDHB8Q9UN66 801 aa8.91□□□□□ -0.98
LINC02238-202ENST00000436262 ANKRD13DQ6ZTN6 518 aa8.89□□□□□ -0.99
LINC02238-202ENST00000436262 ZBTB47Q9UFB7 747 aaPredicted RBP8.88□□□□□ -0.99
LINC02238-202ENST00000436262 RIMBP2O15034 1052 aa8.85□□□□□ -0.99
LINC02238-202ENST00000436262 DPY19L2Q6NUT2 758 aa8.85□□□□□ -0.99
LINC02238-202ENST00000436262 HCSTQ9UBK5 93 aa8.85□□□□□ -0.99
LINC02238-202ENST00000436262 PYGBP11216 843 aa8.84□□□□□ -0.99
LINC02238-202ENST00000436262 GOLGA2Q08379 1002 aa8.84□□□□□ -0.99
LINC02238-202ENST00000436262 PLCD3Q8N3E9 789 aa8.84□□□□□ -0.99
LINC02238-202ENST00000436262 ZSWIM6Q9HCJ5 1215 aa8.84□□□□□ -0.99
LINC02238-202ENST00000436262 BOLA1Q9Y3E2 137 aa8.82□□□□□ -1
LINC02238-202ENST00000436262 LSM11P83369 360 aaKnown RBP eCLIP8.81□□□□□ -1
LINC02238-202ENST00000436262 GPR153Q6NV75 609 aa8.8□□□□□ -1
LINC02238-202ENST00000436262 IRX2Q9BZI1 471 aaPredicted RBP8.77□□□□□ -1.01
LINC02238-202ENST00000436262 RGS20O76081 388 aa8.76□□□□□ -1.01
LINC02238-202ENST00000436262 G3V3G9 751 aa8.75□□□□□ -1.01
LINC02238-202ENST00000436262 DCAF8Q5TAQ9 597 aa8.75□□□□□ -1.01
LINC02238-202ENST00000436262 CSRNP3Q8WYN3 585 aa8.75□□□□□ -1.01
LINC02238-202ENST00000436262 ZNF467Q7Z7K2 595 aaPredicted RBP8.72□□□□□ -1.01
LINC02238-202ENST00000436262 ZNF316A6NFI3 1004 aaPredicted RBP8.67□□□□□ -1.02
LINC02238-202ENST00000436262 PSEN1P49768 467 aa8.67□□□□□ -1.02
LINC02238-202ENST00000436262 PBX2P40425 430 aa8.64□□□□□ -1.03
LINC02238-202ENST00000436262 ARSIQ5FYB1 569 aa8.64□□□□□ -1.03
LINC02238-202ENST00000436262 TMEM92Q6UXU6 159 aa8.64□□□□□ -1.03
LINC02238-202ENST00000436262 POTEEQ6S8J3 1075 aa8.62□□□□□ -1.03
LINC02238-202ENST00000436262 CHRM1P11229 460 aaPredicted RBP8.59□□□□□ -1.03
LINC02238-202ENST00000436262 IFFO2Q5TF58 517 aa8.59□□□□□ -1.03
LINC02238-202ENST00000436262 KHSRPQ92945 711 aaKnown RBP eCLIP8.56□□□□□ -1.04
LINC02238-202ENST00000436262 ADGRD1Q6QNK2 874 aa8.55□□□□□ -1.04
LINC02238-202ENST00000436262 CABP2Q9NPB3 220 aa8.55□□□□□ -1.04
LINC02238-202ENST00000436262 AXIN2Q9Y2T1 843 aa8.55□□□□□ -1.04
LINC02238-202ENST00000436262 PDAP1Q13442 181 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms