RNA–Protein interactions for RNA: ENST00000432260.2

CUL3-205, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-205ENST00000432260 CCDC61Q9Y6R9 512 aa11.71□□□□□ -0.53
CUL3-205ENST00000432260 VASPP50552 380 aaPredicted RBP11.69□□□□□ -0.54
CUL3-205ENST00000432260 NUBP1P53384 320 aa11.68□□□□□ -0.54
CUL3-205ENST00000432260 MS4A3Q96HJ5 214 aa11.68□□□□□ -0.54
CUL3-205ENST00000432260 KIF12Q96FN5 646 aa11.63□□□□□ -0.55
CUL3-205ENST00000432260 KLHL34Q8N239 644 aa11.61□□□□□ -0.55
CUL3-205ENST00000432260 MAP3K13O43283 966 aa11.59□□□□□ -0.55
CUL3-205ENST00000432260 LHX8Q68G74 356 aa11.59□□□□□ -0.55
CUL3-205ENST00000432260 FAM212AQ96EL1 285 aa11.59□□□□□ -0.55
CUL3-205ENST00000432260 DCAF8Q5TAQ9 597 aa11.56□□□□□ -0.56
CUL3-205ENST00000432260 PELP1Q8IZL8 1130 aaKnown RBP11.56□□□□□ -0.56
CUL3-205ENST00000432260 TRPC6Q9Y210 931 aa11.54□□□□□ -0.56
CUL3-205ENST00000432260 ATMINO43313 823 aaPredicted RBP11.52□□□□□ -0.57
CUL3-205ENST00000432260 ASTLQ6HA08 431 aaPredicted RBP11.51□□□□□ -0.57
CUL3-205ENST00000432260 PCDHB13Q9Y5F0 798 aa11.5□□□□□ -0.57
CUL3-205ENST00000432260 IFNLR1Q8IU57 520 aaPredicted RBP11.49□□□□□ -0.57
CUL3-205ENST00000432260 ATN1P54259 1190 aaPredicted RBP11.47□□□□□ -0.57
CUL3-205ENST00000432260 BMP2KQ9NSY1 1161 aaPredicted RBP11.47□□□□□ -0.57
CUL3-205ENST00000432260 POTEB2H3BUK9 544 aa11.46□□□□□ -0.57
CUL3-205ENST00000432260 PYGBP11216 843 aa11.46□□□□□ -0.57
CUL3-205ENST00000432260 SGIP1Q9BQI5 828 aa11.46□□□□□ -0.57
CUL3-205ENST00000432260 TIE1P35590 1138 aa11.44□□□□□ -0.58
CUL3-205ENST00000432260 IFNL1Q8IU54 200 aa11.44□□□□□ -0.58
CUL3-205ENST00000432260 SPOCK2Q92563 424 aa11.43□□□□□ -0.58
CUL3-205ENST00000432260 GSE1Q14687 1217 aa11.42□□□□□ -0.58
CUL3-205ENST00000432260 METRNQ9UJH8 293 aa11.42□□□□□ -0.58
CUL3-205ENST00000432260 SLC39A7Q92504 469 aa11.41□□□□□ -0.58
CUL3-205ENST00000432260 TTLL13PA6NNM8 815 aa11.4□□□□□ -0.58
CUL3-205ENST00000432260 C7P10643 843 aa11.38□□□□□ -0.59
CUL3-205ENST00000432260 PCDHB8Q9UN66 801 aa11.37□□□□□ -0.59
CUL3-205ENST00000432260 CIZ1Q9ULV3 898 aaPredicted RBP11.36□□□□□ -0.59
CUL3-205ENST00000432260 POTEJP0CG39 1038 aa11.34□□□□□ -0.59
CUL3-205ENST00000432260 OTUD5Q96G74 571 aa11.34□□□□□ -0.59
CUL3-205ENST00000432260 TMEM106CQ9BVX2 250 aa11.34□□□□□ -0.59
CUL3-205ENST00000432260 POTEFA5A3E0 1075 aa11.33□□□□□ -0.6
CUL3-205ENST00000432260 TRIM35Q9UPQ4 493 aa11.33□□□□□ -0.6
CUL3-205ENST00000432260 CHRM1P11229 460 aaPredicted RBP11.29□□□□□ -0.6
CUL3-205ENST00000432260 ZNF467Q7Z7K2 595 aaPredicted RBP11.26□□□□□ -0.61
CUL3-205ENST00000432260 SEC24BO95487 1268 aa11.25□□□□□ -0.61
CUL3-205ENST00000432260 COLQQ9Y215 455 aaPredicted RBP11.25□□□□□ -0.61
CUL3-205ENST00000432260 IER5LQ5T953 404 aa11.23□□□□□ -0.61
CUL3-205ENST00000432260 PSEN1P49768 467 aa11.19□□□□□ -0.62
CUL3-205ENST00000432260 MAMSTRQ6ZN01 415 aa11.17□□□□□ -0.62
CUL3-205ENST00000432260 PLCG2P16885 1265 aa11.16□□□□□ -0.62
CUL3-205ENST00000432260 PDAP1Q13442 181 aaKnown RBP11.15□□□□□ -0.62
CUL3-205ENST00000432260 IRX5P78411 483 aaPredicted RBP11.14□□□□□ -0.63
CUL3-205ENST00000432260 TRIM41Q8WV44 630 aa11.14□□□□□ -0.63
CUL3-205ENST00000432260 SCUBE2Q9NQ36 999 aa11.14□□□□□ -0.63
CUL3-205ENST00000432260 GOLGA2Q08379 1002 aa11.12□□□□□ -0.63
CUL3-205ENST00000432260 OCEL1Q9H607 264 aa11.1□□□□□ -0.63
CUL3-205ENST00000432260 MKRN3Q13064 507 aaKnown RBP11.09□□□□□ -0.63
CUL3-205ENST00000432260 CABP2Q9NPB3 220 aa11.07□□□□□ -0.64
CUL3-205ENST00000432260 RNF25Q96BH1 459 aaPredicted RBP11.04□□□□□ -0.64
CUL3-205ENST00000432260 LCE2DQ5TA82 110 aaPredicted RBP11.03□□□□□ -0.64
CUL3-205ENST00000432260 PDCD7Q8N8D1 485 aaKnown RBP11.03□□□□□ -0.64
CUL3-205ENST00000432260 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.03□□□□□ -0.645e-10■□□□□ 10.5
CUL3-205ENST00000432260 RIOK3O14730 519 aaKnown RBP11.02□□□□□ -0.65
CUL3-205ENST00000432260 RTN4Q9NQC3 1192 aaKnown RBP11.01□□□□□ -0.65
CUL3-205ENST00000432260 AMER1Q5JTC6 1135 aaPredicted RBP10.99□□□□□ -0.65
CUL3-205ENST00000432260 SLAIN1Q8ND83 568 aa10.98□□□□□ -0.65
CUL3-205ENST00000432260 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.97□□□□□ -0.65
CUL3-205ENST00000432260 ECM2O94769 699 aaPredicted RBP10.97□□□□□ -0.65
CUL3-205ENST00000432260 ZFP91Q96JP5 570 aaPredicted RBP10.97□□□□□ -0.65
CUL3-205ENST00000432260 VGFO15240 615 aaPredicted RBP10.96□□□□□ -0.65
CUL3-205ENST00000432260 EFCAB3Q8N7B9 438 aa10.95□□□□□ -0.66
CUL3-205ENST00000432260 FAM163AQ96GL9 167 aaPredicted RBP10.95□□□□□ -0.66
CUL3-205ENST00000432260 DPY19L2Q6NUT2 758 aa10.94□□□□□ -0.66
CUL3-205ENST00000432260 ILDR1Q86SU0 546 aaPredicted RBP10.94□□□□□ -0.66
CUL3-205ENST00000432260 PKD2Q13563 968 aa10.93□□□□□ -0.66
CUL3-205ENST00000432260 L3MBTL3Q96JM7 780 aaPredicted RBP10.93□□□□□ -0.66
CUL3-205ENST00000432260 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.93□□□□□ -0.66
CUL3-205ENST00000432260 POTEMA6NI47 508 aa10.92□□□□□ -0.66
CUL3-205ENST00000432260 POTEGQ6S5H5 508 aa10.9□□□□□ -0.66
CUL3-205ENST00000432260 RGL2O15211 777 aa10.88□□□□□ -0.67
CUL3-205ENST00000432260 C3orf67Q6ZVT6 689 aa10.88□□□□□ -0.67
CUL3-205ENST00000432260 BCL11BQ9C0K0 894 aaPredicted RBP10.86□□□□□ -0.67
CUL3-205ENST00000432260 TAOK2Q9UL54 1235 aa10.86□□□□□ -0.67
CUL3-205ENST00000432260 G3V3G9 751 aa10.85□□□□□ -0.67
CUL3-205ENST00000432260 STK24Q9Y6E0 443 aa10.85□□□□□ -0.67
CUL3-205ENST00000432260 BOLA1Q9Y3E2 137 aa10.84□□□□□ -0.67
CUL3-205ENST00000432260 SOX12O15370 315 aa10.83□□□□□ -0.68
CUL3-205ENST00000432260 PHF8Q9UPP1 1060 aa10.83□□□□□ -0.68
CUL3-205ENST00000432260 STK25O00506 426 aa10.81□□□□□ -0.68
CUL3-205ENST00000432260 MS4A4AQ96JQ5 239 aa10.79□□□□□ -0.68
CUL3-205ENST00000432260 ST18O60284 1047 aa10.78□□□□□ -0.68
CUL3-205ENST00000432260 SNPHO15079 494 aa10.76□□□□□ -0.69
CUL3-205ENST00000432260 TMEM121BQ9BXQ6 578 aaPredicted RBP10.75□□□□□ -0.69
CUL3-205ENST00000432260 NLRP6P59044 892 aa10.74□□□□□ -0.69
CUL3-205ENST00000432260 MICALL2Q8IY33 904 aa10.73□□□□□ -0.69
CUL3-205ENST00000432260 FBXO22Q8NEZ5 403 aa10.72□□□□□ -0.69
CUL3-205ENST00000432260 MFRPQ9BY79 579 aa10.72□□□□□ -0.69
CUL3-205ENST00000432260 PLSCR2Q9NRY7 297 aa10.7□□□□□ -0.7
CUL3-205ENST00000432260 TMEM92Q6UXU6 159 aa10.67□□□□□ -0.7
CUL3-205ENST00000432260 MARVELD3Q96A59 401 aa10.64□□□□□ -0.71
CUL3-205ENST00000432260 PCDH10Q9P2E7 1040 aa10.63□□□□□ -0.71
CUL3-205ENST00000432260 HOXB3P14651 431 aaPredicted RBP10.62□□□□□ -0.71
CUL3-205ENST00000432260 HS6ST3Q8IZP7 471 aa10.62□□□□□ -0.71
CUL3-205ENST00000432260 CHGAP10645 457 aaKnown RBP10.61□□□□□ -0.71
CUL3-205ENST00000432260 CDAN1Q8IWY9 1227 aa10.61□□□□□ -0.71
CUL3-205ENST00000432260 DCAF8L2P0C7V8 631 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms