RNA–Protein interactions for RNA: ENST00000430945.5

LINC00475-205, long intergenic non-protein coding RNA 475, humanhuman

TSL 2

Gene LINC00475, Length 476 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-205ENST00000430945 SLC39A7Q92504 469 aa17.71■□□□□ 0.43
LINC00475-205ENST00000430945 MS4A3Q96HJ5 214 aa17.71■□□□□ 0.43
LINC00475-205ENST00000430945 PCDH10Q9P2E7 1040 aa17.71■□□□□ 0.43
LINC00475-205ENST00000430945 C7P10643 843 aa17.69■□□□□ 0.42
LINC00475-205ENST00000430945 ATMINO43313 823 aaPredicted RBP17.68■□□□□ 0.42
LINC00475-205ENST00000430945 POTEJP0CG39 1038 aa17.66■□□□□ 0.42
LINC00475-205ENST00000430945 MAMSTRQ6ZN01 415 aa17.64■□□□□ 0.41
LINC00475-205ENST00000430945 FAM163AQ96GL9 167 aaPredicted RBP17.52■□□□□ 0.4
LINC00475-205ENST00000430945 LCE2DQ5TA82 110 aaPredicted RBP17.51■□□□□ 0.39
LINC00475-205ENST00000430945 SCUBE2Q9NQ36 999 aa17.51■□□□□ 0.39
LINC00475-205ENST00000430945 TSPYL2Q9H2G4 693 aaPredicted RBP17.5■□□□□ 0.39
LINC00475-205ENST00000430945 ATN1P54259 1190 aaPredicted RBP17.49■□□□□ 0.39
LINC00475-205ENST00000430945 CCDC61Q9Y6R9 512 aa17.42■□□□□ 0.38
LINC00475-205ENST00000430945 KIF12Q96FN5 646 aa17.37■□□□□ 0.37
LINC00475-205ENST00000430945 BMP2KQ9NSY1 1161 aaPredicted RBP17.36■□□□□ 0.37
LINC00475-205ENST00000430945 POTEFA5A3E0 1075 aa17.35■□□□□ 0.37
LINC00475-205ENST00000430945 PROM2Q8N271 834 aa17.35■□□□□ 0.37
LINC00475-205ENST00000430945 TRPC6Q9Y210 931 aa17.3■□□□□ 0.36
LINC00475-205ENST00000430945 TIE1P35590 1138 aa17.26■□□□□ 0.35
LINC00475-205ENST00000430945 MAP3K13O43283 966 aa17.23■□□□□ 0.35
LINC00475-205ENST00000430945 SEC24BO95487 1268 aa17.19■□□□□ 0.34
LINC00475-205ENST00000430945 COLQQ9Y215 455 aaPredicted RBP17.18■□□□□ 0.34
LINC00475-205ENST00000430945 CDAN1Q8IWY9 1227 aa17.16■□□□□ 0.34
LINC00475-205ENST00000430945 TTLL13PA6NNM8 815 aa17.15■□□□□ 0.34
LINC00475-205ENST00000430945 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
LINC00475-205ENST00000430945 RASEFQ8IZ41 740 aa17.12■□□□□ 0.33
LINC00475-205ENST00000430945 MIER1Q8N108 512 aa17.06■□□□□ 0.32
LINC00475-205ENST00000430945 IER5LQ5T953 404 aa17.05■□□□□ 0.32
LINC00475-205ENST00000430945 TRIM35Q9UPQ4 493 aa17.05■□□□□ 0.32
LINC00475-205ENST00000430945 SLAIN1Q8ND83 568 aa16.99■□□□□ 0.31
LINC00475-205ENST00000430945 FKBP8Q14318 412 aa16.98■□□□□ 0.31
LINC00475-205ENST00000430945 SGIP1Q9BQI5 828 aa16.98■□□□□ 0.31
LINC00475-205ENST00000430945 PCDHB13Q9Y5F0 798 aa16.98■□□□□ 0.31
LINC00475-205ENST00000430945 ST18O60284 1047 aa16.97■□□□□ 0.31
LINC00475-205ENST00000430945 PLCG2P16885 1265 aa16.85■□□□□ 0.29
LINC00475-205ENST00000430945 IFNL1Q8IU54 200 aa16.85■□□□□ 0.29
LINC00475-205ENST00000430945 PLCD3Q8N3E9 789 aa16.84■□□□□ 0.29
LINC00475-205ENST00000430945 TMEM106CQ9BVX2 250 aa16.83■□□□□ 0.28
LINC00475-205ENST00000430945 ZBTB47Q9UFB7 747 aaPredicted RBP16.8■□□□□ 0.28
LINC00475-205ENST00000430945 NUBP1P53384 320 aa16.78■□□□□ 0.28
LINC00475-205ENST00000430945 MMRN1Q13201 1228 aa16.78■□□□□ 0.28
LINC00475-205ENST00000430945 IRX5P78411 483 aaPredicted RBP16.75■□□□□ 0.27
LINC00475-205ENST00000430945 SPNS2Q8IVW8 549 aa16.75■□□□□ 0.27
LINC00475-205ENST00000430945 TMEM121BQ9BXQ6 578 aaPredicted RBP16.74■□□□□ 0.27
LINC00475-205ENST00000430945 FBXO3Q9UK99 471 aa16.72■□□□□ 0.27
LINC00475-205ENST00000430945 FAM212AQ96EL1 285 aa16.7■□□□□ 0.26
LINC00475-205ENST00000430945 SNPHO15079 494 aa16.68■□□□□ 0.26
LINC00475-205ENST00000430945 OCEL1Q9H607 264 aa16.67■□□□□ 0.26
LINC00475-205ENST00000430945 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.64■□□□□ 0.25
LINC00475-205ENST00000430945 MARVELD3Q96A59 401 aa16.62■□□□□ 0.25
LINC00475-205ENST00000430945 PYGBP11216 843 aa16.49■□□□□ 0.23
LINC00475-205ENST00000430945 DCAF8Q5TAQ9 597 aa16.47■□□□□ 0.23
LINC00475-205ENST00000430945 EMP3P54852 163 aa16.45■□□□□ 0.22
LINC00475-205ENST00000430945 PCDHB8Q9UN66 801 aa16.45■□□□□ 0.22
LINC00475-205ENST00000430945 VASPP50552 380 aaPredicted RBP16.43■□□□□ 0.22
LINC00475-205ENST00000430945 C3orf67Q6ZVT6 689 aa16.42■□□□□ 0.22
LINC00475-205ENST00000430945 PDCD7Q8N8D1 485 aaKnown RBP16.39■□□□□ 0.21
LINC00475-205ENST00000430945 HS3ST6Q96QI5 342 aa16.36■□□□□ 0.21
LINC00475-205ENST00000430945 L3MBTL3Q96JM7 780 aaPredicted RBP16.35■□□□□ 0.21
LINC00475-205ENST00000430945 KRTAP3-3Q9BYR6 98 aa16.35■□□□□ 0.21
LINC00475-205ENST00000430945 KRTAP3-2Q9BYR7 98 aa16.35■□□□□ 0.21
LINC00475-205ENST00000430945 KLHL34Q8N239 644 aa16.34■□□□□ 0.21
LINC00475-205ENST00000430945 POTEB3A0JP26 581 aa16.32■□□□□ 0.2
LINC00475-205ENST00000430945 FAM205CA6NFA0 338 aa16.32■□□□□ 0.2
LINC00475-205ENST00000430945 POTEBQ6S5H4 581 aa16.32■□□□□ 0.2
LINC00475-205ENST00000430945 GOLGA2Q08379 1002 aa16.31■□□□□ 0.2
LINC00475-205ENST00000430945 MKRN3Q13064 507 aaKnown RBP16.31■□□□□ 0.2
LINC00475-205ENST00000430945 GSE1Q14687 1217 aa16.25■□□□□ 0.19
LINC00475-205ENST00000430945 ZNF467Q7Z7K2 595 aaPredicted RBP16.24■□□□□ 0.19
LINC00475-205ENST00000430945 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.23■□□□□ 0.19
LINC00475-205ENST00000430945 PSEN1P49768 467 aa16.12■□□□□ 0.17
LINC00475-205ENST00000430945 SPOCK2Q92563 424 aa16.11■□□□□ 0.17
LINC00475-205ENST00000430945 IFNLR1Q8IU57 520 aaPredicted RBP16.09■□□□□ 0.17
LINC00475-205ENST00000430945 CHRM1P11229 460 aaPredicted RBP16.08■□□□□ 0.16
LINC00475-205ENST00000430945 ILDR1Q86SU0 546 aaPredicted RBP16.07■□□□□ 0.16
LINC00475-205ENST00000430945 DPY19L2Q6NUT2 758 aa16.06■□□□□ 0.16
LINC00475-205ENST00000430945 HOXB3P14651 431 aaPredicted RBP16.05■□□□□ 0.16
LINC00475-205ENST00000430945 G3V3G9 751 aa16.03■□□□□ 0.16
LINC00475-205ENST00000430945 HOXB1P14653 301 aaPredicted RBP16.02■□□□□ 0.16
LINC00475-205ENST00000430945 ZNF710Q8N1W2 664 aa16.02■□□□□ 0.16
LINC00475-205ENST00000430945 BOLA1Q9Y3E2 137 aa16.01■□□□□ 0.15
LINC00475-205ENST00000430945 ERBB3P21860 1342 aa15.99■□□□□ 0.15
LINC00475-205ENST00000430945 RNF166Q96A37 237 aaPredicted RBP15.99■□□□□ 0.15
LINC00475-205ENST00000430945 PDAP1Q13442 181 aaKnown RBP15.98■□□□□ 0.15
LINC00475-205ENST00000430945 CIZ1Q9ULV3 898 aaPredicted RBP15.96■□□□□ 0.15
LINC00475-205ENST00000430945 DOK7Q18PE1 504 aa15.94■□□□□ 0.14
LINC00475-205ENST00000430945 CABP2Q9NPB3 220 aa15.94■□□□□ 0.14
LINC00475-205ENST00000430945 TRIM41Q8WV44 630 aa15.88■□□□□ 0.13
LINC00475-205ENST00000430945 MYT1LQ9UL68 1186 aa15.87■□□□□ 0.13
LINC00475-205ENST00000430945 VARS2Q5ST30 1063 aaKnown RBP15.86■□□□□ 0.13
LINC00475-205ENST00000430945 RIMBP2O15034 1052 aa15.85■□□□□ 0.13
LINC00475-205ENST00000430945 ZNF687Q8N1G0 1237 aa15.76■□□□□ 0.11
LINC00475-205ENST00000430945 ZSWIM6Q9HCJ5 1215 aa15.72■□□□□ 0.11
LINC00475-205ENST00000430945 PTGER2P43116 358 aa15.7■□□□□ 0.1
LINC00475-205ENST00000430945 EFCAB3Q8N7B9 438 aa15.66■□□□□ 0.1
LINC00475-205ENST00000430945 GPR153Q6NV75 609 aa15.65■□□□□ 0.1
LINC00475-205ENST00000430945 TMEM92Q6UXU6 159 aa15.65■□□□□ 0.1
LINC00475-205ENST00000430945 MICALL2Q8IY33 904 aa15.63■□□□□ 0.09
LINC00475-205ENST00000430945 ANKRD13DQ6ZTN6 518 aa15.59■□□□□ 0.09
LINC00475-205ENST00000430945 RIOK3O14730 519 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms