RNA–Protein interactions for RNA: ENST00000428744.1

KIF3A-204, Transcript of kinesin family member 3A, humanhuman

TSL 5

Gene KIF3A, Length 658 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-204ENST00000428744 DCBLD2Q96PD2 775 aa10.91□□□□□ -0.66
KIF3A-204ENST00000428744 FBXO3Q9UK99 471 aa10.91□□□□□ -0.66
KIF3A-204ENST00000428744 NUBP1P53384 320 aa10.88□□□□□ -0.67
KIF3A-204ENST00000428744 ZBTB47Q9UFB7 747 aaPredicted RBP10.87□□□□□ -0.67
KIF3A-204ENST00000428744 KIF12Q96FN5 646 aa10.85□□□□□ -0.67
KIF3A-204ENST00000428744 MS4A3Q96HJ5 214 aa10.85□□□□□ -0.67
KIF3A-204ENST00000428744 VASPP50552 380 aaPredicted RBP10.8□□□□□ -0.68
KIF3A-204ENST00000428744 MAP3K13O43283 966 aa10.78□□□□□ -0.68
KIF3A-204ENST00000428744 PELP1Q8IZL8 1130 aaKnown RBP10.78□□□□□ -0.68
KIF3A-204ENST00000428744 ASTLQ6HA08 431 aaPredicted RBP10.77□□□□□ -0.69
KIF3A-204ENST00000428744 ATMINO43313 823 aaPredicted RBP10.75□□□□□ -0.69
KIF3A-204ENST00000428744 TRPC6Q9Y210 931 aa10.73□□□□□ -0.69
KIF3A-204ENST00000428744 FAM212AQ96EL1 285 aa10.72□□□□□ -0.69
KIF3A-204ENST00000428744 SGIP1Q9BQI5 828 aa10.71□□□□□ -0.69
KIF3A-204ENST00000428744 PCDH10Q9P2E7 1040 aa10.69□□□□□ -0.7
KIF3A-204ENST00000428744 POTEB2H3BUK9 544 aa10.68□□□□□ -0.7
KIF3A-204ENST00000428744 ATN1P54259 1190 aaPredicted RBP10.68□□□□□ -0.7
KIF3A-204ENST00000428744 BMP2KQ9NSY1 1161 aaPredicted RBP10.68□□□□□ -0.7
KIF3A-204ENST00000428744 DCAF8Q5TAQ9 597 aa10.67□□□□□ -0.7
KIF3A-204ENST00000428744 KLHL34Q8N239 644 aa10.67□□□□□ -0.7
KIF3A-204ENST00000428744 TIE1P35590 1138 aa10.66□□□□□ -0.7
KIF3A-204ENST00000428744 IFNLR1Q8IU57 520 aaPredicted RBP10.66□□□□□ -0.7
KIF3A-204ENST00000428744 PCDHB13Q9Y5F0 798 aa10.66□□□□□ -0.7
KIF3A-204ENST00000428744 POTEMA6NI47 508 aa10.65□□□□□ -0.7
KIF3A-204ENST00000428744 OTUD5Q96G74 571 aa10.65□□□□□ -0.7
KIF3A-204ENST00000428744 C7P10643 843 aa10.64□□□□□ -0.71
KIF3A-204ENST00000428744 IFNL1Q8IU54 200 aa10.64□□□□□ -0.71
KIF3A-204ENST00000428744 SLC39A7Q92504 469 aa10.63□□□□□ -0.71
KIF3A-204ENST00000428744 METRNQ9UJH8 293 aa10.62□□□□□ -0.71
KIF3A-204ENST00000428744 TTLL13PA6NNM8 815 aa10.61□□□□□ -0.71
KIF3A-204ENST00000428744 PYGBP11216 843 aa10.6□□□□□ -0.71
KIF3A-204ENST00000428744 POTEGQ6S5H5 508 aa10.6□□□□□ -0.71
KIF3A-204ENST00000428744 GSE1Q14687 1217 aa10.58□□□□□ -0.72
KIF3A-204ENST00000428744 POTEFA5A3E0 1075 aa10.57□□□□□ -0.72
KIF3A-204ENST00000428744 POTEJP0CG39 1038 aa10.56□□□□□ -0.72
KIF3A-204ENST00000428744 SPOCK2Q92563 424 aa10.56□□□□□ -0.72
KIF3A-204ENST00000428744 CHRM1P11229 460 aaPredicted RBP10.54□□□□□ -0.72
KIF3A-204ENST00000428744 MAMSTRQ6ZN01 415 aa10.53□□□□□ -0.72
KIF3A-204ENST00000428744 TRIM35Q9UPQ4 493 aa10.53□□□□□ -0.72
KIF3A-204ENST00000428744 PCDHB8Q9UN66 801 aa10.52□□□□□ -0.73
KIF3A-204ENST00000428744 TMEM106CQ9BVX2 250 aa10.51□□□□□ -0.73
KIF3A-204ENST00000428744 COLQQ9Y215 455 aaPredicted RBP10.49□□□□□ -0.73
KIF3A-204ENST00000428744 IER5LQ5T953 404 aa10.48□□□□□ -0.73
KIF3A-204ENST00000428744 ZNF467Q7Z7K2 595 aaPredicted RBP10.44□□□□□ -0.74
KIF3A-204ENST00000428744 CIZ1Q9ULV3 898 aaPredicted RBP10.44□□□□□ -0.74
KIF3A-204ENST00000428744 SEC24BO95487 1268 aa10.42□□□□□ -0.74
KIF3A-204ENST00000428744 IRX5P78411 483 aaPredicted RBP10.4□□□□□ -0.74
KIF3A-204ENST00000428744 SCUBE2Q9NQ36 999 aa10.39□□□□□ -0.75
KIF3A-204ENST00000428744 PSEN1P49768 467 aa10.36□□□□□ -0.75
KIF3A-204ENST00000428744 OCEL1Q9H607 264 aa10.34□□□□□ -0.75
KIF3A-204ENST00000428744 PDAP1Q13442 181 aaKnown RBP10.33□□□□□ -0.76
KIF3A-204ENST00000428744 TRIM41Q8WV44 630 aa10.33□□□□□ -0.76
KIF3A-204ENST00000428744 PLCG2P16885 1265 aa10.32□□□□□ -0.76
KIF3A-204ENST00000428744 PDCD7Q8N8D1 485 aaKnown RBP10.28□□□□□ -0.76
KIF3A-204ENST00000428744 ILDR1Q86SU0 546 aaPredicted RBP10.27□□□□□ -0.77
KIF3A-204ENST00000428744 FAM163AQ96GL9 167 aaPredicted RBP10.27□□□□□ -0.77
KIF3A-204ENST00000428744 MKRN3Q13064 507 aaKnown RBP10.26□□□□□ -0.77
KIF3A-204ENST00000428744 LCE2DQ5TA82 110 aaPredicted RBP10.26□□□□□ -0.77
KIF3A-204ENST00000428744 GOLGA2Q08379 1002 aa10.25□□□□□ -0.77
KIF3A-204ENST00000428744 RNF25Q96BH1 459 aaPredicted RBP10.25□□□□□ -0.77
KIF3A-204ENST00000428744 CABP2Q9NPB3 220 aa10.23□□□□□ -0.77
KIF3A-204ENST00000428744 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.22□□□□□ -0.77
KIF3A-204ENST00000428744 RIOK3O14730 519 aaKnown RBP10.2□□□□□ -0.78
KIF3A-204ENST00000428744 AMER1Q5JTC6 1135 aaPredicted RBP10.2□□□□□ -0.78
KIF3A-204ENST00000428744 SLAIN1Q8ND83 568 aa10.19□□□□□ -0.78
KIF3A-204ENST00000428744 DPY19L2Q6NUT2 758 aa10.17□□□□□ -0.78
KIF3A-204ENST00000428744 L3MBTL3Q96JM7 780 aaPredicted RBP10.16□□□□□ -0.78
KIF3A-204ENST00000428744 EFCAB3Q8N7B9 438 aa10.15□□□□□ -0.78
KIF3A-204ENST00000428744 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.14□□□□□ -0.79
KIF3A-204ENST00000428744 VGFO15240 615 aaPredicted RBP10.14□□□□□ -0.79
KIF3A-204ENST00000428744 ZFP91Q96JP5 570 aaPredicted RBP10.14□□□□□ -0.79
KIF3A-204ENST00000428744 PKD2Q13563 968 aa10.13□□□□□ -0.79
KIF3A-204ENST00000428744 CDAN1Q8IWY9 1227 aa10.13□□□□□ -0.79
KIF3A-204ENST00000428744 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.13□□□□□ -0.79
KIF3A-204ENST00000428744 ECM2O94769 699 aaPredicted RBP10.08□□□□□ -0.8
KIF3A-204ENST00000428744 SOX12O15370 315 aa10.07□□□□□ -0.8
KIF3A-204ENST00000428744 BOLA1Q9Y3E2 137 aa10.07□□□□□ -0.8
KIF3A-204ENST00000428744 ST18O60284 1047 aa10.06□□□□□ -0.8
KIF3A-204ENST00000428744 C3orf67Q6ZVT6 689 aa10.06□□□□□ -0.8
KIF3A-204ENST00000428744 TMEM121BQ9BXQ6 578 aaPredicted RBP10.06□□□□□ -0.8
KIF3A-204ENST00000428744 RGL2O15211 777 aa10.04□□□□□ -0.8
KIF3A-204ENST00000428744 MS4A4AQ96JQ5 239 aa10.03□□□□□ -0.8
KIF3A-204ENST00000428744 BCL11BQ9C0K0 894 aaPredicted RBP10.03□□□□□ -0.8
KIF3A-204ENST00000428744 TAOK2Q9UL54 1235 aa10.03□□□□□ -0.8
KIF3A-204ENST00000428744 PHF8Q9UPP1 1060 aa10.02□□□□□ -0.81
KIF3A-204ENST00000428744 SNPHO15079 494 aa10.01□□□□□ -0.81
KIF3A-204ENST00000428744 RTN4Q9NQC3 1192 aaKnown RBP10.01□□□□□ -0.81
KIF3A-204ENST00000428744 FBXO22Q8NEZ5 403 aa9.98□□□□□ -0.81
KIF3A-204ENST00000428744 STK24Q9Y6E0 443 aa9.98□□□□□ -0.81
KIF3A-204ENST00000428744 G3V3G9 751 aa9.97□□□□□ -0.81
KIF3A-204ENST00000428744 STK25O00506 426 aa9.97□□□□□ -0.81
KIF3A-204ENST00000428744 MICALL2Q8IY33 904 aa9.96□□□□□ -0.82
KIF3A-204ENST00000428744 MFRPQ9BY79 579 aa9.95□□□□□ -0.82
KIF3A-204ENST00000428744 NLRP6P59044 892 aa9.94□□□□□ -0.82
KIF3A-204ENST00000428744 TMEM92Q6UXU6 159 aa9.93□□□□□ -0.82
KIF3A-204ENST00000428744 HOXB3P14651 431 aaPredicted RBP9.92□□□□□ -0.82
KIF3A-204ENST00000428744 MMRN1Q13201 1228 aa9.92□□□□□ -0.82
KIF3A-204ENST00000428744 MARVELD3Q96A59 401 aa9.89□□□□□ -0.83
KIF3A-204ENST00000428744 SPNS2Q8IVW8 549 aa9.88□□□□□ -0.83
KIF3A-204ENST00000428744 SLC24A1O60721 1099 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms