RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 POTEIP0CG38 1075 aa11.02□□□□□ -0.65
TIMM9P3-201ENST00000428659 ZBTB47Q9UFB7 747 aaPredicted RBP11□□□□□ -0.65
TIMM9P3-201ENST00000428659 PAK3O75914 559 aaPredicted RBP10.98□□□□□ -0.65
TIMM9P3-201ENST00000428659 KIF12Q96FN5 646 aa10.97□□□□□ -0.65
TIMM9P3-201ENST00000428659 TRPC6Q9Y210 931 aa10.96□□□□□ -0.65
TIMM9P3-201ENST00000428659 DCAF8Q5TAQ9 597 aa10.95□□□□□ -0.66
TIMM9P3-201ENST00000428659 MS4A3Q96HJ5 214 aa10.95□□□□□ -0.66
TIMM9P3-201ENST00000428659 MAP3K13O43283 966 aa10.94□□□□□ -0.66
TIMM9P3-201ENST00000428659 SPOCK2Q92563 424 aa10.93□□□□□ -0.66
TIMM9P3-201ENST00000428659 PYGBP11216 843 aa10.9□□□□□ -0.66
TIMM9P3-201ENST00000428659 FAM212AQ96EL1 285 aa10.9□□□□□ -0.66
TIMM9P3-201ENST00000428659 PELP1Q8IZL8 1130 aaKnown RBP10.86□□□□□ -0.67
TIMM9P3-201ENST00000428659 IFNL1Q8IU54 200 aa10.83□□□□□ -0.68
TIMM9P3-201ENST00000428659 CIZ1Q9ULV3 898 aaPredicted RBP10.83□□□□□ -0.68
TIMM9P3-201ENST00000428659 CLCN6P51797 869 aa10.81□□□□□ -0.68
TIMM9P3-201ENST00000428659 GSE1Q14687 1217 aa10.8□□□□□ -0.68
TIMM9P3-201ENST00000428659 PCDHB8Q9UN66 801 aa10.8□□□□□ -0.68
TIMM9P3-201ENST00000428659 PCDHB13Q9Y5F0 798 aa10.8□□□□□ -0.68
TIMM9P3-201ENST00000428659 DCBLD2Q96PD2 775 aa10.78□□□□□ -0.68
TIMM9P3-201ENST00000428659 BMP2KQ9NSY1 1161 aaPredicted RBP10.78□□□□□ -0.68
TIMM9P3-201ENST00000428659 ATMINO43313 823 aaPredicted RBP10.77□□□□□ -0.69
TIMM9P3-201ENST00000428659 ATN1P54259 1190 aaPredicted RBP10.76□□□□□ -0.69
TIMM9P3-201ENST00000428659 ASTLQ6HA08 431 aaPredicted RBP10.75□□□□□ -0.69
TIMM9P3-201ENST00000428659 CHRM1P11229 460 aaPredicted RBP10.74□□□□□ -0.69
TIMM9P3-201ENST00000428659 SGIP1Q9BQI5 828 aa10.73□□□□□ -0.69
TIMM9P3-201ENST00000428659 PKD2Q13563 968 aa10.72□□□□□ -0.69
TIMM9P3-201ENST00000428659 TTLL13PA6NNM8 815 aa10.71□□□□□ -0.69
TIMM9P3-201ENST00000428659 RNF25Q96BH1 459 aaPredicted RBP10.7□□□□□ -0.7
TIMM9P3-201ENST00000428659 POTEB2H3BUK9 544 aa10.68□□□□□ -0.7
TIMM9P3-201ENST00000428659 TIE1P35590 1138 aa10.68□□□□□ -0.7
TIMM9P3-201ENST00000428659 POTEFA5A3E0 1075 aa10.67□□□□□ -0.7
TIMM9P3-201ENST00000428659 TMEM106CQ9BVX2 250 aa10.65□□□□□ -0.7
TIMM9P3-201ENST00000428659 TRIM35Q9UPQ4 493 aa10.63□□□□□ -0.71
TIMM9P3-201ENST00000428659 POTEJP0CG39 1038 aa10.61□□□□□ -0.71
TIMM9P3-201ENST00000428659 PSEN1P49768 467 aa10.6□□□□□ -0.71
TIMM9P3-201ENST00000428659 COLQQ9Y215 455 aaPredicted RBP10.6□□□□□ -0.71
TIMM9P3-201ENST00000428659 LHX8Q68G74 356 aa10.59□□□□□ -0.71
TIMM9P3-201ENST00000428659 ZNF467Q7Z7K2 595 aaPredicted RBP10.59□□□□□ -0.71
TIMM9P3-201ENST00000428659 METRNQ9UJH8 293 aa10.59□□□□□ -0.71
TIMM9P3-201ENST00000428659 RGL2O15211 777 aa10.58□□□□□ -0.72
TIMM9P3-201ENST00000428659 ECM2O94769 699 aaPredicted RBP10.56□□□□□ -0.72
TIMM9P3-201ENST00000428659 SLC39A7Q92504 469 aa10.55□□□□□ -0.72
TIMM9P3-201ENST00000428659 C7P10643 843 aa10.54□□□□□ -0.72
TIMM9P3-201ENST00000428659 PDAP1Q13442 181 aaKnown RBP10.54□□□□□ -0.72
TIMM9P3-201ENST00000428659 TRIM41Q8WV44 630 aa10.54□□□□□ -0.72
TIMM9P3-201ENST00000428659 RIOK3O14730 519 aaKnown RBP10.52□□□□□ -0.73
TIMM9P3-201ENST00000428659 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.5□□□□□ -0.73
TIMM9P3-201ENST00000428659 IRX5P78411 483 aaPredicted RBP10.5□□□□□ -0.73
TIMM9P3-201ENST00000428659 ZFP91Q96JP5 570 aaPredicted RBP10.5□□□□□ -0.73
TIMM9P3-201ENST00000428659 CABP2Q9NPB3 220 aa10.48□□□□□ -0.73
TIMM9P3-201ENST00000428659 OTUD5Q96G74 571 aa10.47□□□□□ -0.73
TIMM9P3-201ENST00000428659 IER5LQ5T953 404 aa10.44□□□□□ -0.74
TIMM9P3-201ENST00000428659 EFCAB3Q8N7B9 438 aa10.44□□□□□ -0.74
TIMM9P3-201ENST00000428659 VGFO15240 615 aaPredicted RBP10.43□□□□□ -0.74
TIMM9P3-201ENST00000428659 DPY19L2Q6NUT2 758 aa10.43□□□□□ -0.74
TIMM9P3-201ENST00000428659 SEC24BO95487 1268 aa10.42□□□□□ -0.74
TIMM9P3-201ENST00000428659 PDCD7Q8N8D1 485 aaKnown RBP10.42□□□□□ -0.74
TIMM9P3-201ENST00000428659 ILDR1Q86SU0 546 aaPredicted RBP10.4□□□□□ -0.74
TIMM9P3-201ENST00000428659 BCL11BQ9C0K0 894 aaPredicted RBP10.39□□□□□ -0.75
TIMM9P3-201ENST00000428659 OCEL1Q9H607 264 aa10.39□□□□□ -0.75
TIMM9P3-201ENST00000428659 MKRN3Q13064 507 aaKnown RBP10.38□□□□□ -0.75
TIMM9P3-201ENST00000428659 PLCG2P16885 1265 aa10.37□□□□□ -0.75
TIMM9P3-201ENST00000428659 RTN4Q9NQC3 1192 aaKnown RBP10.37□□□□□ -0.75
TIMM9P3-201ENST00000428659 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.37□□□□□ -0.75
TIMM9P3-201ENST00000428659 STK24Q9Y6E0 443 aa10.36□□□□□ -0.75
TIMM9P3-201ENST00000428659 STK25O00506 426 aa10.34□□□□□ -0.75
TIMM9P3-201ENST00000428659 GOLGA2Q08379 1002 aa10.34□□□□□ -0.75
TIMM9P3-201ENST00000428659 MS4A4AQ96JQ5 239 aa10.34□□□□□ -0.75
TIMM9P3-201ENST00000428659 PHF8Q9UPP1 1060 aa10.34□□□□□ -0.75
TIMM9P3-201ENST00000428659 MFRPQ9BY79 579 aa10.29□□□□□ -0.76
TIMM9P3-201ENST00000428659 FBXO22Q8NEZ5 403 aa10.28□□□□□ -0.76
TIMM9P3-201ENST00000428659 CHGAP10645 457 aaKnown RBP10.26□□□□□ -0.77
TIMM9P3-201ENST00000428659 NKX1-1Q15270 411 aaPredicted RBP10.25□□□□□ -0.77
TIMM9P3-201ENST00000428659 SOX12O15370 315 aa10.24□□□□□ -0.77
TIMM9P3-201ENST00000428659 HS6ST3Q8IZP7 471 aa10.24□□□□□ -0.77
TIMM9P3-201ENST00000428659 PPP1R37O75864 691 aa10.22□□□□□ -0.77
TIMM9P3-201ENST00000428659 TAOK2Q9UL54 1235 aa10.21□□□□□ -0.77
TIMM9P3-201ENST00000428659 SCUBE2Q9NQ36 999 aa10.2□□□□□ -0.78
TIMM9P3-201ENST00000428659 MAMSTRQ6ZN01 415 aa10.19□□□□□ -0.78
TIMM9P3-201ENST00000428659 BOLA1Q9Y3E2 137 aa10.19□□□□□ -0.78
TIMM9P3-201ENST00000428659 AMER1Q5JTC6 1135 aaPredicted RBP10.18□□□□□ -0.78
TIMM9P3-201ENST00000428659 TMEM92Q6UXU6 159 aa10.18□□□□□ -0.78
TIMM9P3-201ENST00000428659 SLAIN1Q8ND83 568 aa10.18□□□□□ -0.78
TIMM9P3-201ENST00000428659 TMEM121BQ9BXQ6 578 aaPredicted RBP10.18□□□□□ -0.78
TIMM9P3-201ENST00000428659 DCAF8L2P0C7V8 631 aa10.17□□□□□ -0.78
TIMM9P3-201ENST00000428659 NLRP6P59044 892 aa10.17□□□□□ -0.78
TIMM9P3-201ENST00000428659 LCE2DQ5TA82 110 aaPredicted RBP10.17□□□□□ -0.78
TIMM9P3-201ENST00000428659 L3MBTL3Q96JM7 780 aaPredicted RBP10.17□□□□□ -0.78
TIMM9P3-201ENST00000428659 MICALL2Q8IY33 904 aa10.16□□□□□ -0.78
TIMM9P3-201ENST00000428659 DNAJC5Q9H3Z4 198 aa10.13□□□□□ -0.79
TIMM9P3-201ENST00000428659 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.12□□□□□ -0.79
TIMM9P3-201ENST00000428659 C3orf67Q6ZVT6 689 aa10.09□□□□□ -0.79
TIMM9P3-201ENST00000428659 FAM163AQ96GL9 167 aaPredicted RBP10.09□□□□□ -0.79
TIMM9P3-201ENST00000428659 GTPBP6O43824 516 aaPredicted RBP10.08□□□□□ -0.8
TIMM9P3-201ENST00000428659 G3V3G9 751 aa10.02□□□□□ -0.81
TIMM9P3-201ENST00000428659 ST18O60284 1047 aa10.01□□□□□ -0.81
TIMM9P3-201ENST00000428659 HOXB3P14651 431 aaPredicted RBP10.01□□□□□ -0.81
TIMM9P3-201ENST00000428659 KIF3CO14782 793 aa9.99□□□□□ -0.81
TIMM9P3-201ENST00000428659 C2orf72A6NCS6 295 aa9.98□□□□□ -0.81
TIMM9P3-201ENST00000428659 POTEMA6NI47 508 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms