RNA–Protein interactions for RNA: ENST00000427862.1

GCFC2-203, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-203ENST00000427862 DCAF8L2P0C7V8 631 aa12.69□□□□□ -0.38
GCFC2-203ENST00000427862 FAM212AQ96EL1 285 aa12.69□□□□□ -0.38
GCFC2-203ENST00000427862 TRIM41Q8WV44 630 aa12.68□□□□□ -0.38
GCFC2-203ENST00000427862 RNF25Q96BH1 459 aaPredicted RBP12.66□□□□□ -0.38
GCFC2-203ENST00000427862 EVX2Q03828 476 aa12.65□□□□□ -0.38
GCFC2-203ENST00000427862 CHRM1P11229 460 aaPredicted RBP12.62□□□□□ -0.39
GCFC2-203ENST00000427862 TSPYL2Q9H2G4 693 aaPredicted RBP12.62□□□□□ -0.39
GCFC2-203ENST00000427862 PYGBP11216 843 aa12.58□□□□□ -0.4
GCFC2-203ENST00000427862 SLC24A1O60721 1099 aa12.54□□□□□ -0.4
GCFC2-203ENST00000427862 CCDC61Q9Y6R9 512 aa12.54□□□□□ -0.4
GCFC2-203ENST00000427862 RIOK3O14730 519 aaKnown RBP12.52□□□□□ -0.41
GCFC2-203ENST00000427862 CHGAP10645 457 aaKnown RBP12.49□□□□□ -0.41
GCFC2-203ENST00000427862 BBXQ8WY36 941 aaPredicted RBP12.48□□□□□ -0.41
GCFC2-203ENST00000427862 PLCB2Q00722 1185 aa12.46□□□□□ -0.41
GCFC2-203ENST00000427862 C19orf67A6NJJ6 358 aa12.44□□□□□ -0.42
GCFC2-203ENST00000427862 CD44P16070 742 aaKnown RBP12.44□□□□□ -0.42
GCFC2-203ENST00000427862 HS6ST3Q8IZP7 471 aa12.44□□□□□ -0.42
GCFC2-203ENST00000427862 VGFO15240 615 aaPredicted RBP12.42□□□□□ -0.42
GCFC2-203ENST00000427862 SGIP1Q9BQI5 828 aa12.42□□□□□ -0.42
GCFC2-203ENST00000427862 ZRANB1Q9UGI0 708 aa12.42□□□□□ -0.42
GCFC2-203ENST00000427862 PAK3O75914 559 aaPredicted RBP12.41□□□□□ -0.42
GCFC2-203ENST00000427862 KIF12Q96FN5 646 aa12.41□□□□□ -0.42
GCFC2-203ENST00000427862 PCDHB8Q9UN66 801 aa12.4□□□□□ -0.42
GCFC2-203ENST00000427862 PCDHB13Q9Y5F0 798 aa12.4□□□□□ -0.42
GCFC2-203ENST00000427862 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.39□□□□□ -0.43
GCFC2-203ENST00000427862 ZFP91Q96JP5 570 aaPredicted RBP12.39□□□□□ -0.43
GCFC2-203ENST00000427862 MAP3K13O43283 966 aa12.38□□□□□ -0.43
GCFC2-203ENST00000427862 DNAJC5Q9H3Z4 198 aa12.38□□□□□ -0.43
GCFC2-203ENST00000427862 TAOK2Q9UL54 1235 aa12.37□□□□□ -0.43
GCFC2-203ENST00000427862 GABBR2O75899 941 aa12.36□□□□□ -0.43
GCFC2-203ENST00000427862 PHF12Q96QT6 1004 aa12.36□□□□□ -0.43
GCFC2-203ENST00000427862 ZNF467Q7Z7K2 595 aaPredicted RBP12.35□□□□□ -0.43
GCFC2-203ENST00000427862 IFNL1Q8IU54 200 aa12.35□□□□□ -0.43
GCFC2-203ENST00000427862 ZNF579Q8NAF0 562 aaKnown RBP12.35□□□□□ -0.43
GCFC2-203ENST00000427862 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.35□□□□□ -0.43
GCFC2-203ENST00000427862 STK25O00506 426 aa12.34□□□□□ -0.43
GCFC2-203ENST00000427862 NKX1-1Q15270 411 aaPredicted RBP12.34□□□□□ -0.43
GCFC2-203ENST00000427862 PAXIP1Q6ZW49 1069 aaPredicted RBP12.34□□□□□ -0.43
GCFC2-203ENST00000427862 BCL11BQ9C0K0 894 aaPredicted RBP12.32□□□□□ -0.44
GCFC2-203ENST00000427862 LHX8Q68G74 356 aa12.31□□□□□ -0.44
GCFC2-203ENST00000427862 CFAP44Q96MT7 982 aa12.3□□□□□ -0.44
GCFC2-203ENST00000427862 PDAP1Q13442 181 aaKnown RBP12.29□□□□□ -0.44
GCFC2-203ENST00000427862 STK24Q9Y6E0 443 aa12.29□□□□□ -0.44
GCFC2-203ENST00000427862 SPRYD3Q8NCJ5 442 aa12.28□□□□□ -0.44
GCFC2-203ENST00000427862 PSEN1P49768 467 aa12.27□□□□□ -0.45
GCFC2-203ENST00000427862 HAP1P54257 671 aaPredicted RBP12.25□□□□□ -0.45
GCFC2-203ENST00000427862 GTPBP6O43824 516 aaPredicted RBP12.23□□□□□ -0.45
GCFC2-203ENST00000427862 TRPC6Q9Y210 931 aa12.22□□□□□ -0.45
GCFC2-203ENST00000427862 MS4A3Q96HJ5 214 aa12.21□□□□□ -0.45
GCFC2-203ENST00000427862 TSHZ2Q9NRE2 1034 aa12.17□□□□□ -0.46
GCFC2-203ENST00000427862 GALR2O43603 387 aaPredicted RBP12.13□□□□□ -0.47
GCFC2-203ENST00000427862 EFCAB3Q8N7B9 438 aa12.11□□□□□ -0.47
GCFC2-203ENST00000427862 CABP2Q9NPB3 220 aa12.11□□□□□ -0.47
GCFC2-203ENST00000427862 KDM2AQ9Y2K7 1162 aa12.11□□□□□ -0.47
GCFC2-203ENST00000427862 VSIG10Q8N0Z9 540 aa12.1□□□□□ -0.47
GCFC2-203ENST00000427862 MFRPQ9BY79 579 aa12.1□□□□□ -0.47
GCFC2-203ENST00000427862 TMEM106CQ9BVX2 250 aa12.09□□□□□ -0.47
GCFC2-203ENST00000427862 POTEIP0CG38 1075 aa12.08□□□□□ -0.48
GCFC2-203ENST00000427862 TIE1P35590 1138 aa12.05□□□□□ -0.48
GCFC2-203ENST00000427862 BMP2KQ9NSY1 1161 aaPredicted RBP12.05□□□□□ -0.48
GCFC2-203ENST00000427862 TTLL13PA6NNM8 815 aa12.04□□□□□ -0.48
GCFC2-203ENST00000427862 CLCN6P51797 869 aa12.04□□□□□ -0.48
GCFC2-203ENST00000427862 FBXO22Q8NEZ5 403 aa12.04□□□□□ -0.48
GCFC2-203ENST00000427862 PHF8Q9UPP1 1060 aa12.03□□□□□ -0.48
GCFC2-203ENST00000427862 SOX12O15370 315 aa12.02□□□□□ -0.49
GCFC2-203ENST00000427862 RYDENQ9NUL5 291 aaKnown RBP12.02□□□□□ -0.49
GCFC2-203ENST00000427862 PPP1R37O75864 691 aa11.99□□□□□ -0.49
GCFC2-203ENST00000427862 NLRP6P59044 892 aa11.97□□□□□ -0.49
GCFC2-203ENST00000427862 MS4A4AQ96JQ5 239 aa11.97□□□□□ -0.49
GCFC2-203ENST00000427862 DCBLD2Q96PD2 775 aa11.96□□□□□ -0.49
GCFC2-203ENST00000427862 ATMINO43313 823 aaPredicted RBP11.94□□□□□ -0.5
GCFC2-203ENST00000427862 ATN1P54259 1190 aaPredicted RBP11.94□□□□□ -0.5
GCFC2-203ENST00000427862 TRIM35Q9UPQ4 493 aa11.94□□□□□ -0.5
GCFC2-203ENST00000427862 CADPS2Q86UW7 1296 aa11.93□□□□□ -0.5
GCFC2-203ENST00000427862 GOLGA2Q08379 1002 aa11.92□□□□□ -0.5
GCFC2-203ENST00000427862 MKRN3Q13064 507 aaKnown RBP11.92□□□□□ -0.5
GCFC2-203ENST00000427862 ASTLQ6HA08 431 aaPredicted RBP11.92□□□□□ -0.5
GCFC2-203ENST00000427862 ILDR1Q86SU0 546 aaPredicted RBP11.92□□□□□ -0.5
GCFC2-203ENST00000427862 PLSCR2Q9NRY7 297 aa11.92□□□□□ -0.5
GCFC2-203ENST00000427862 PELP1Q8IZL8 1130 aaKnown RBP11.87□□□□□ -0.51
GCFC2-203ENST00000427862 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.85□□□□□ -0.513e-7■■■□□ 17.4
GCFC2-203ENST00000427862 DPY19L2Q6NUT2 758 aa11.83□□□□□ -0.52
GCFC2-203ENST00000427862 IRX5P78411 483 aaPredicted RBP11.82□□□□□ -0.52
GCFC2-203ENST00000427862 PDCD7Q8N8D1 485 aaKnown RBP11.8□□□□□ -0.52
GCFC2-203ENST00000427862 IER5LQ5T953 404 aa11.77□□□□□ -0.53
GCFC2-203ENST00000427862 OCEL1Q9H607 264 aa11.76□□□□□ -0.53
GCFC2-203ENST00000427862 COLQQ9Y215 455 aaPredicted RBP11.74□□□□□ -0.53
GCFC2-203ENST00000427862 NCKAP5LQ9HCH0 1330 aa11.74□□□□□ -0.53
GCFC2-203ENST00000427862 POTEFA5A3E0 1075 aa11.73□□□□□ -0.53
GCFC2-203ENST00000427862 OTUD5Q96G74 571 aa11.73□□□□□ -0.53
GCFC2-203ENST00000427862 BCANQ96GW7 911 aa11.69□□□□□ -0.54
GCFC2-203ENST00000427862 MICALL2Q8IY33 904 aa11.68□□□□□ -0.54
GCFC2-203ENST00000427862 SLC39A7Q92504 469 aa11.68□□□□□ -0.54
GCFC2-203ENST00000427862 CRISPLD2Q9H0B8 497 aa11.68□□□□□ -0.54
GCFC2-203ENST00000427862 POTEB2H3BUK9 544 aa11.67□□□□□ -0.54
GCFC2-203ENST00000427862 PLCG2P16885 1265 aa11.67□□□□□ -0.54
GCFC2-203ENST00000427862 TMEM121BQ9BXQ6 578 aaPredicted RBP11.67□□□□□ -0.54
GCFC2-203ENST00000427862 C7P10643 843 aa11.66□□□□□ -0.54
GCFC2-203ENST00000427862 PDE4AP27815 886 aa11.65□□□□□ -0.54
GCFC2-203ENST00000427862 LARP6Q9BRS8 491 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 214.3 ms