RNA–Protein interactions for RNA: ENST00000427509.5

LINC01410-202, Transcript of long intergenic non-protein coding RNA 1410, humanhuman

TSL 1 (best)

Gene LINC01410, Length 647 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01410-202ENST00000427509 PHF12Q96QT6 1004 aa13.12□□□□□ -0.31
LINC01410-202ENST00000427509 FAM212AQ96EL1 285 aa13.1□□□□□ -0.31
LINC01410-202ENST00000427509 CCDC61Q9Y6R9 512 aa13.1□□□□□ -0.31
LINC01410-202ENST00000427509 DCAF8Q5TAQ9 597 aa13.08□□□□□ -0.32
LINC01410-202ENST00000427509 SPOCK2Q92563 424 aa13.06□□□□□ -0.32
LINC01410-202ENST00000427509 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.33
LINC01410-202ENST00000427509 KIF12Q96FN5 646 aa13.01□□□□□ -0.33
LINC01410-202ENST00000427509 GSE1Q14687 1217 aa13□□□□□ -0.33
LINC01410-202ENST00000427509 DCBLD2Q96PD2 775 aa12.99□□□□□ -0.33
LINC01410-202ENST00000427509 MAP3K13O43283 966 aa12.96□□□□□ -0.33
LINC01410-202ENST00000427509 MS4A3Q96HJ5 214 aa12.96□□□□□ -0.33
LINC01410-202ENST00000427509 CIZ1Q9ULV3 898 aaPredicted RBP12.92□□□□□ -0.34
LINC01410-202ENST00000427509 SGIP1Q9BQI5 828 aa12.91□□□□□ -0.34
LINC01410-202ENST00000427509 PYGBP11216 843 aa12.9□□□□□ -0.34
LINC01410-202ENST00000427509 PCDHB13Q9Y5F0 798 aa12.9□□□□□ -0.34
LINC01410-202ENST00000427509 POTEIP0CG38 1075 aa12.89□□□□□ -0.35
LINC01410-202ENST00000427509 CHRM1P11229 460 aaPredicted RBP12.83□□□□□ -0.36
LINC01410-202ENST00000427509 IFNL1Q8IU54 200 aa12.81□□□□□ -0.36
LINC01410-202ENST00000427509 ASTLQ6HA08 431 aaPredicted RBP12.79□□□□□ -0.36
LINC01410-202ENST00000427509 TRPC6Q9Y210 931 aa12.79□□□□□ -0.36
LINC01410-202ENST00000427509 ATMINO43313 823 aaPredicted RBP12.78□□□□□ -0.36
LINC01410-202ENST00000427509 TIE1P35590 1138 aa12.78□□□□□ -0.36
LINC01410-202ENST00000427509 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
LINC01410-202ENST00000427509 ZNF467Q7Z7K2 595 aaPredicted RBP12.75□□□□□ -0.37
LINC01410-202ENST00000427509 BMP2KQ9NSY1 1161 aaPredicted RBP12.75□□□□□ -0.37
LINC01410-202ENST00000427509 PCDHB8Q9UN66 801 aa12.75□□□□□ -0.37
LINC01410-202ENST00000427509 ATN1P54259 1190 aaPredicted RBP12.72□□□□□ -0.37
LINC01410-202ENST00000427509 PELP1Q8IZL8 1130 aaKnown RBP12.72□□□□□ -0.37
LINC01410-202ENST00000427509 TTLL13PA6NNM8 815 aa12.71□□□□□ -0.37
LINC01410-202ENST00000427509 TMEM106CQ9BVX2 250 aa12.69□□□□□ -0.38
LINC01410-202ENST00000427509 SLC39A7Q92504 469 aa12.68□□□□□ -0.38
LINC01410-202ENST00000427509 C7P10643 843 aa12.67□□□□□ -0.38
LINC01410-202ENST00000427509 LHX8Q68G74 356 aa12.64□□□□□ -0.39
LINC01410-202ENST00000427509 TRIM35Q9UPQ4 493 aa12.64□□□□□ -0.39
LINC01410-202ENST00000427509 METRNQ9UJH8 293 aa12.63□□□□□ -0.39
LINC01410-202ENST00000427509 PSEN1P49768 467 aa12.62□□□□□ -0.39
LINC01410-202ENST00000427509 PDAP1Q13442 181 aaKnown RBP12.61□□□□□ -0.39
LINC01410-202ENST00000427509 ECM2O94769 699 aaPredicted RBP12.58□□□□□ -0.4
LINC01410-202ENST00000427509 PKD2Q13563 968 aa12.56□□□□□ -0.4
LINC01410-202ENST00000427509 IER5LQ5T953 404 aa12.56□□□□□ -0.4
LINC01410-202ENST00000427509 RIOK3O14730 519 aaKnown RBP12.55□□□□□ -0.4
LINC01410-202ENST00000427509 SEC24BO95487 1268 aa12.55□□□□□ -0.4
LINC01410-202ENST00000427509 GOLGA2Q08379 1002 aa12.54□□□□□ -0.4
LINC01410-202ENST00000427509 RNF25Q96BH1 459 aaPredicted RBP12.51□□□□□ -0.41
LINC01410-202ENST00000427509 TAOK2Q9UL54 1235 aa12.5□□□□□ -0.41
LINC01410-202ENST00000427509 POTEB2H3BUK9 544 aa12.49□□□□□ -0.41
LINC01410-202ENST00000427509 VGFO15240 615 aaPredicted RBP12.49□□□□□ -0.41
LINC01410-202ENST00000427509 MKRN3Q13064 507 aaKnown RBP12.49□□□□□ -0.41
LINC01410-202ENST00000427509 COLQQ9Y215 455 aaPredicted RBP12.48□□□□□ -0.41
LINC01410-202ENST00000427509 POTEFA5A3E0 1075 aa12.47□□□□□ -0.41
LINC01410-202ENST00000427509 PLCG2P16885 1265 aa12.46□□□□□ -0.41
LINC01410-202ENST00000427509 CABP2Q9NPB3 220 aa12.45□□□□□ -0.42
LINC01410-202ENST00000427509 OCEL1Q9H607 264 aa12.44□□□□□ -0.42
LINC01410-202ENST00000427509 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.43□□□□□ -0.42
LINC01410-202ENST00000427509 RGL2O15211 777 aa12.43□□□□□ -0.42
LINC01410-202ENST00000427509 IRX5P78411 483 aaPredicted RBP12.43□□□□□ -0.42
LINC01410-202ENST00000427509 ZFP91Q96JP5 570 aaPredicted RBP12.43□□□□□ -0.42
LINC01410-202ENST00000427509 MAMSTRQ6ZN01 415 aa12.4□□□□□ -0.42
LINC01410-202ENST00000427509 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.39□□□□□ -0.43
LINC01410-202ENST00000427509 POTEJP0CG39 1038 aa12.37□□□□□ -0.43
LINC01410-202ENST00000427509 OTUD5Q96G74 571 aa12.37□□□□□ -0.43
LINC01410-202ENST00000427509 EFCAB3Q8N7B9 438 aa12.35□□□□□ -0.43
LINC01410-202ENST00000427509 BCL11BQ9C0K0 894 aaPredicted RBP12.34□□□□□ -0.43
LINC01410-202ENST00000427509 SCUBE2Q9NQ36 999 aa12.34□□□□□ -0.43
LINC01410-202ENST00000427509 STK25O00506 426 aa12.33□□□□□ -0.44
LINC01410-202ENST00000427509 STK24Q9Y6E0 443 aa12.33□□□□□ -0.44
LINC01410-202ENST00000427509 PDCD7Q8N8D1 485 aaKnown RBP12.3□□□□□ -0.44
LINC01410-202ENST00000427509 SOX12O15370 315 aa12.29□□□□□ -0.44
LINC01410-202ENST00000427509 ILDR1Q86SU0 546 aaPredicted RBP12.29□□□□□ -0.44
LINC01410-202ENST00000427509 L3MBTL3Q96JM7 780 aaPredicted RBP12.29□□□□□ -0.44
LINC01410-202ENST00000427509 DPY19L2Q6NUT2 758 aa12.24□□□□□ -0.45
LINC01410-202ENST00000427509 G3V3G9 751 aa12.22□□□□□ -0.45
LINC01410-202ENST00000427509 PHF8Q9UPP1 1060 aa12.21□□□□□ -0.45
LINC01410-202ENST00000427509 CHGAP10645 457 aaKnown RBP12.2□□□□□ -0.46
LINC01410-202ENST00000427509 NLRP6P59044 892 aa12.2□□□□□ -0.46
LINC01410-202ENST00000427509 AMER1Q5JTC6 1135 aaPredicted RBP12.19□□□□□ -0.46
LINC01410-202ENST00000427509 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.19□□□□□ -0.46
LINC01410-202ENST00000427509 C3orf67Q6ZVT6 689 aa12.17□□□□□ -0.46
LINC01410-202ENST00000427509 HS6ST3Q8IZP7 471 aa12.17□□□□□ -0.46
LINC01410-202ENST00000427509 SLAIN1Q8ND83 568 aa12.17□□□□□ -0.46
LINC01410-202ENST00000427509 BOLA1Q9Y3E2 137 aa12.17□□□□□ -0.46
LINC01410-202ENST00000427509 DCAF8L2P0C7V8 631 aa12.16□□□□□ -0.46
LINC01410-202ENST00000427509 MS4A4AQ96JQ5 239 aa12.14□□□□□ -0.47
LINC01410-202ENST00000427509 MFRPQ9BY79 579 aa12.14□□□□□ -0.47
LINC01410-202ENST00000427509 FBXO22Q8NEZ5 403 aa12.12□□□□□ -0.47
LINC01410-202ENST00000427509 RTN4Q9NQC3 1192 aaKnown RBP12.09□□□□□ -0.47
LINC01410-202ENST00000427509 TMEM121BQ9BXQ6 578 aaPredicted RBP12.08□□□□□ -0.48
LINC01410-202ENST00000427509 MICALL2Q8IY33 904 aa12.06□□□□□ -0.48
LINC01410-202ENST00000427509 FAM163AQ96GL9 167 aaPredicted RBP12.04□□□□□ -0.48
LINC01410-202ENST00000427509 DNAJC5Q9H3Z4 198 aa12.04□□□□□ -0.48
LINC01410-202ENST00000427509 SNPHO15079 494 aa12□□□□□ -0.49
LINC01410-202ENST00000427509 RYDENQ9NUL5 291 aaKnown RBP11.99□□□□□ -0.49
LINC01410-202ENST00000427509 NKX1-1Q15270 411 aaPredicted RBP11.98□□□□□ -0.49
LINC01410-202ENST00000427509 PPP1R37O75864 691 aa11.96□□□□□ -0.49
LINC01410-202ENST00000427509 TMEM92Q6UXU6 159 aa11.91□□□□□ -0.5
LINC01410-202ENST00000427509 ST18O60284 1047 aa11.88□□□□□ -0.51
LINC01410-202ENST00000427509 GTPBP6O43824 516 aaPredicted RBP11.87□□□□□ -0.51
LINC01410-202ENST00000427509 LCE2DQ5TA82 110 aaPredicted RBP11.87□□□□□ -0.51
LINC01410-202ENST00000427509 BBXQ8WY36 941 aaPredicted RBP11.86□□□□□ -0.51
LINC01410-202ENST00000427509 POTEMA6NI47 508 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms